RNA–Protein interactions for RNA: ENST00000438393.5

BRD1-204, Transcript of bromodomain containing 1, humanhuman

TSL 2

Gene BRD1, Length 3,051 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD1-204ENST00000438393 TOM1L2Q6ZVM7 507 aa16.76■□□□□ 0.27
BRD1-204ENST00000438393 LARP1Q6PKG0 1096 aaKnown RBP16.76■□□□□ 0.27
BRD1-204ENST00000438393 JCADQ9P266 1359 aa16.75■□□□□ 0.27
BRD1-204ENST00000438393 DUSP27Q5VZP5 1158 aa16.75■□□□□ 0.27
BRD1-204ENST00000438393 PHACTR3Q96KR7 559 aa16.75■□□□□ 0.27
BRD1-204ENST00000438393 SLIT3O75094 1523 aa16.75■□□□□ 0.27
BRD1-204ENST00000438393 CDK12Q9NYV4 1490 aaPredicted RBP16.75■□□□□ 0.27
BRD1-204ENST00000438393 ERBB3P21860 1342 aa16.74■□□□□ 0.27
BRD1-204ENST00000438393 PHRF1Q9P1Y6 1649 aaKnown RBP16.74■□□□□ 0.27
BRD1-204ENST00000438393 COL3A1P02461 1466 aaPredicted RBP16.74■□□□□ 0.27
BRD1-204ENST00000438393 VIRMAQ69YN4 1812 aaKnown RBP16.74■□□□□ 0.27
BRD1-204ENST00000438393 RGPD5Q99666 1765 aa16.73■□□□□ 0.27
BRD1-204ENST00000438393 RGS3P49796 1198 aa16.73■□□□□ 0.27
BRD1-204ENST00000438393 L1TD1Q5T7N2 865 aaKnown RBP16.73■□□□□ 0.27
BRD1-204ENST00000438393 ZNF521Q96K83 1311 aa16.72■□□□□ 0.27
BRD1-204ENST00000438393 TCP11L2Q8N4U5 519 aa16.71■□□□□ 0.27
BRD1-204ENST00000438393 MAPK8IP3Q9UPT6 1336 aa16.71■□□□□ 0.27
BRD1-204ENST00000438393 CAMTA1Q9Y6Y1 1673 aa16.71■□□□□ 0.26
BRD1-204ENST00000438393 ANTXR1Q9H6X2 564 aa16.7■□□□□ 0.26
BRD1-204ENST00000438393 A0A0G2JS52 829 aa16.69■□□□□ 0.26
BRD1-204ENST00000438393 SHPRHQ149N8 1683 aa16.69■□□□□ 0.26
BRD1-204ENST00000438393 THUMPD2Q9BTF0 503 aaKnown RBP16.68■□□□□ 0.26
BRD1-204ENST00000438393 LRP6O75581 1613 aa16.68■□□□□ 0.26
BRD1-204ENST00000438393 SEC24BO95487 1268 aa16.68■□□□□ 0.26
BRD1-204ENST00000438393 DCTN1Q14203 1278 aa16.68■□□□□ 0.26
BRD1-204ENST00000438393 FBXO41Q8TF61 875 aa16.68■□□□□ 0.26
BRD1-204ENST00000438393 CPDO75976 1380 aa16.68■□□□□ 0.26
BRD1-204ENST00000438393 GLIPR1L2Q4G1C9 344 aa16.68■□□□□ 0.26
BRD1-204ENST00000438393 RGPD2P0DJD1 1756 aa16.68■□□□□ 0.26
BRD1-204ENST00000438393 RUNDC1Q96C34 613 aa16.67■□□□□ 0.26
BRD1-204ENST00000438393 RTL1A6NKG5 1358 aa16.67■□□□□ 0.26
BRD1-204ENST00000438393 CRYBG1Q9Y4K1 1723 aa16.67■□□□□ 0.26
BRD1-204ENST00000438393 FSD2A1L4K1 749 aa16.67■□□□□ 0.26
BRD1-204ENST00000438393 IGSF1Q8N6C5 1336 aa16.67■□□□□ 0.26
BRD1-204ENST00000438393 XRCC6P12956 609 aaKnown RBP eCLIP16.66■□□□□ 0.26
BRD1-204ENST00000438393 ABCA3Q99758 1704 aa16.66■□□□□ 0.26
BRD1-204ENST00000438393 EP400Q96L91 3159 aa16.66■□□□□ 0.26
BRD1-204ENST00000438393 FCHSD2O94868 740 aa16.66■□□□□ 0.26
BRD1-204ENST00000438393 PLEKHF1Q96S99 279 aa16.66■□□□□ 0.26
BRD1-204ENST00000438393 CLCN1P35523 988 aa16.66■□□□□ 0.26
BRD1-204ENST00000438393 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.66■□□□□ 0.26
BRD1-204ENST00000438393 ZMYND15Q9H091 742 aa16.65■□□□□ 0.26
BRD1-204ENST00000438393 WDR17Q8IZU2 1322 aa16.65■□□□□ 0.26
BRD1-204ENST00000438393 IGHDP01880 384 aa16.65■□□□□ 0.26
BRD1-204ENST00000438393 RIPK4P57078 832 aa16.65■□□□□ 0.26
BRD1-204ENST00000438393 USP21Q9UK80 565 aa16.65■□□□□ 0.26
BRD1-204ENST00000438393 USP54Q70EL1 1684 aa16.65■□□□□ 0.26
BRD1-204ENST00000438393 COL5A2P05997 1499 aaPredicted RBP16.64■□□□□ 0.26
BRD1-204ENST00000438393 TRMT2AQ8IZ69 625 aaKnown RBP16.64■□□□□ 0.25
BRD1-204ENST00000438393 RAPGEF4Q8WZA2 1011 aa16.64■□□□□ 0.25
BRD1-204ENST00000438393 MTHFSDQ2M296 383 aaKnown RBP16.64■□□□□ 0.25
BRD1-204ENST00000438393 KAT6BQ8WYB5 2073 aa16.64■□□□□ 0.25
BRD1-204ENST00000438393 SPATA31A6Q5VVP1 1343 aa16.63■□□□□ 0.25
BRD1-204ENST00000438393 GOLGA2Q08379 1002 aa16.63■□□□□ 0.25
BRD1-204ENST00000438393 SLFN5Q08AF3 891 aa16.63■□□□□ 0.25
BRD1-204ENST00000438393 BECN1Q14457 450 aa16.63■□□□□ 0.25
BRD1-204ENST00000438393 SLKQ9H2G2 1235 aaPredicted RBP16.63■□□□□ 0.25
BRD1-204ENST00000438393 AFF2P51816 1311 aa16.63■□□□□ 0.25
BRD1-204ENST00000438393 TMPOP42166 694 aaKnown RBP16.63■□□□□ 0.25
BRD1-204ENST00000438393 KIF24Q5T7B8 1368 aa16.62■□□□□ 0.25
BRD1-204ENST00000438393 MCM10Q7L590 875 aa16.62■□□□□ 0.25
BRD1-204ENST00000438393 DDX54Q8TDD1 881 aaKnown RBP16.62■□□□□ 0.25
BRD1-204ENST00000438393 RRP9O43818 475 aaKnown RBP16.61■□□□□ 0.25
BRD1-204ENST00000438393 VSIG10Q8N0Z9 540 aa16.61■□□□□ 0.25
BRD1-204ENST00000438393 FAM98CQ17RN3 349 aaKnown RBP16.61■□□□□ 0.25
BRD1-204ENST00000438393 COL18A1P39060 1754 aa16.61■□□□□ 0.25
BRD1-204ENST00000438393 PNNQ9H307 717 aaKnown RBP16.61■□□□□ 0.25
BRD1-204ENST00000438393 NAP1L5Q96NT1 182 aaPredicted RBP16.6■□□□□ 0.25
BRD1-204ENST00000438393 FAM182BQ5T319 152 aa16.59■□□□□ 0.25
BRD1-204ENST00000438393 UNC5CLQ8IV45 518 aa16.59■□□□□ 0.25
BRD1-204ENST00000438393 PANK2Q9BZ23 570 aa16.59■□□□□ 0.25
BRD1-204ENST00000438393 COL22A1Q8NFW1 1626 aaPredicted RBP16.59■□□□□ 0.25
BRD1-204ENST00000438393 GOLGA6L3A6NEY3 463 aa16.59■□□□□ 0.25
BRD1-204ENST00000438393 HSP90AA2PQ14568 343 aaPredicted RBP16.59■□□□□ 0.25
BRD1-204ENST00000438393 ZNF530Q6P9A1 599 aaPredicted RBP16.59■□□□□ 0.25
BRD1-204ENST00000438393 SPINK5Q9NQ38 1064 aaPredicted RBP16.59■□□□□ 0.25
BRD1-204ENST00000438393 TATP17735 454 aaPredicted RBP16.59■□□□□ 0.25
BRD1-204ENST00000438393 MPRIPQ6WCQ1 1025 aa16.59■□□□□ 0.25
BRD1-204ENST00000438393 ILDR1Q86SU0 546 aaPredicted RBP16.59■□□□□ 0.25
BRD1-204ENST00000438393 MEGF6O75095 1541 aa16.58■□□□□ 0.24
BRD1-204ENST00000438393 MIS18AQ9NYP9 233 aa16.58■□□□□ 0.24
BRD1-204ENST00000438393 HSP90AA1P07900 732 aaKnown RBP16.57■□□□□ 0.24
BRD1-204ENST00000438393 NFE2L2Q16236 605 aa16.57■□□□□ 0.24
BRD1-204ENST00000438393 WWC1Q8IX03 1113 aa16.57■□□□□ 0.24
BRD1-204ENST00000438393 CARD10Q9BWT7 1032 aa16.57■□□□□ 0.24
BRD1-204ENST00000438393 BCAR3O75815 825 aa16.56■□□□□ 0.24
BRD1-204ENST00000438393 LMO7Q8WWI1 1683 aa16.56■□□□□ 0.24
BRD1-204ENST00000438393 KDRP35968 1356 aa16.56■□□□□ 0.24
BRD1-204ENST00000438393 IL2RBP14784 551 aa16.56■□□□□ 0.24
BRD1-204ENST00000438393 TBC1D2Q9BYX2 928 aa16.56■□□□□ 0.24
BRD1-204ENST00000438393 TRIM35Q9UPQ4 493 aa16.56■□□□□ 0.24
BRD1-204ENST00000438393 CRB1P82279 1406 aa16.56■□□□□ 0.24
BRD1-204ENST00000438393 BCL9LQ86UU0 1499 aa16.56■□□□□ 0.24
BRD1-204ENST00000438393 QTRT2Q9H974 415 aaKnown RBP16.55■□□□□ 0.24
BRD1-204ENST00000438393 LGR6Q9HBX8 967 aa16.55■□□□□ 0.24
BRD1-204ENST00000438393 TSR2Q969E8 191 aaKnown RBP16.55■□□□□ 0.24
BRD1-204ENST00000438393 TBC1D32Q96NH3 1257 aa16.55■□□□□ 0.24
BRD1-204ENST00000438393 FNBP4Q8N3X1 1017 aaPredicted RBP16.54■□□□□ 0.24
BRD1-204ENST00000438393 RTF1Q92541 710 aaKnown RBP16.54■□□□□ 0.24
BRD1-204ENST00000438393 MCM4P33991 863 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms