RNA–Protein interactions for RNA: ENST00000438282.6

CNTN4-209, Transcript of contactin 4, humanhuman

TSL 5

Gene CNTN4, Length 2,463 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-209ENST00000438282 PLEKHG5O94827 1062 aa13.24□□□□□ -0.29
CNTN4-209ENST00000438282 BRPF1P55201 1214 aaPredicted RBP13.24□□□□□ -0.29
CNTN4-209ENST00000438282 KRT28Q7Z3Y7 464 aa13.24□□□□□ -0.29
CNTN4-209ENST00000438282 DDX19BQ9UMR2 479 aa13.24□□□□□ -0.29
CNTN4-209ENST00000438282 NCOA3Q9Y6Q9 1424 aa13.24□□□□□ -0.29
CNTN4-209ENST00000438282 PDE4AP27815 886 aa13.23□□□□□ -0.29
CNTN4-209ENST00000438282 TMEM57Q8N5G2 664 aa13.23□□□□□ -0.29
CNTN4-209ENST00000438282 DAXXQ9UER7 740 aaPredicted RBP13.23□□□□□ -0.29
CNTN4-209ENST00000438282 PCDHB15Q9Y5E8 787 aa13.23□□□□□ -0.29
CNTN4-209ENST00000438282 STRCQ7RTU9 1775 aa13.23□□□□□ -0.29
CNTN4-209ENST00000438282 USHBP1Q8N6Y0 703 aa13.23□□□□□ -0.29
CNTN4-209ENST00000438282 LMTK3Q96Q04 1460 aa13.23□□□□□ -0.29
CNTN4-209ENST00000438282 CHL1O00533 1208 aa13.22□□□□□ -0.29
CNTN4-209ENST00000438282 RGS3P49796 1198 aa13.22□□□□□ -0.29
CNTN4-209ENST00000438282 USP19O94966 1318 aa13.22□□□□□ -0.29
CNTN4-209ENST00000438282 RGPD5Q99666 1765 aa13.21□□□□□ -0.29
CNTN4-209ENST00000438282 BACH2Q9BYV9 841 aa13.21□□□□□ -0.29
CNTN4-209ENST00000438282 VIRMAQ69YN4 1812 aaKnown RBP13.21□□□□□ -0.3
CNTN4-209ENST00000438282 MAP3K5Q99683 1374 aa13.21□□□□□ -0.3
CNTN4-209ENST00000438282 GCP02774 474 aa13.2□□□□□ -0.3
CNTN4-209ENST00000438282 RWDD1Q9H446 243 aaPredicted RBP13.2□□□□□ -0.3
CNTN4-209ENST00000438282 MSH6P52701 1360 aa13.2□□□□□ -0.3
CNTN4-209ENST00000438282 KIAA0232Q92628 1395 aa13.2□□□□□ -0.3
CNTN4-209ENST00000438282 ARHGAP45Q92619 1136 aa13.2□□□□□ -0.3
CNTN4-209ENST00000438282 CAMTA1Q9Y6Y1 1673 aa13.2□□□□□ -0.3
CNTN4-209ENST00000438282 MED1Q15648 1581 aaPredicted RBP13.19□□□□□ -0.3
CNTN4-209ENST00000438282 KDM4FA0A1W2PPD8 638 aa13.19□□□□□ -0.3
CNTN4-209ENST00000438282 GNAT3A8MTJ3 354 aa13.19□□□□□ -0.3
CNTN4-209ENST00000438282 HTATSF1O43719 755 aaKnown RBP13.19□□□□□ -0.3
CNTN4-209ENST00000438282 HAP1P54257 671 aaPredicted RBP13.19□□□□□ -0.3
CNTN4-209ENST00000438282 KRT24Q2M2I5 525 aa13.19□□□□□ -0.3
CNTN4-209ENST00000438282 TSPYL4Q9UJ04 414 aa13.19□□□□□ -0.3
CNTN4-209ENST00000438282 ARHGEF25Q86VW2 580 aa13.19□□□□□ -0.3
CNTN4-209ENST00000438282 NBPF6Q5VWK0 638 aa13.18□□□□□ -0.3
CNTN4-209ENST00000438282 CADPS2Q86UW7 1296 aa13.18□□□□□ -0.3
CNTN4-209ENST00000438282 NBPF4Q96M43 638 aa13.18□□□□□ -0.3
CNTN4-209ENST00000438282 LMO7Q8WWI1 1683 aa13.18□□□□□ -0.3
CNTN4-209ENST00000438282 ANP32AP39687 249 aaKnown RBP13.18□□□□□ -0.3
CNTN4-209ENST00000438282 MIS18AQ9NYP9 233 aa13.18□□□□□ -0.3
CNTN4-209ENST00000438282 FAM208AQ9UK61 1670 aaKnown RBP13.18□□□□□ -0.3
CNTN4-209ENST00000438282 LRRC59Q96AG4 307 aaKnown RBP13.17□□□□□ -0.3
CNTN4-209ENST00000438282 API5Q9BZZ5 524 aaKnown RBP13.17□□□□□ -0.3
CNTN4-209ENST00000438282 ABCC4O15439 1325 aa13.17□□□□□ -0.3
CNTN4-209ENST00000438282 DDX17Q92841 729 aaKnown RBP13.17□□□□□ -0.3
CNTN4-209ENST00000438282 TNS3Q68CZ2 1445 aa13.16□□□□□ -0.3
CNTN4-209ENST00000438282 CRYBG1Q9Y4K1 1723 aa13.16□□□□□ -0.3
CNTN4-209ENST00000438282 MSH5O43196 834 aa13.16□□□□□ -0.3
CNTN4-209ENST00000438282 ANKRD24Q8TF21 1146 aa13.16□□□□□ -0.3
CNTN4-209ENST00000438282 ZBTB40Q9NUA8 1239 aa13.16□□□□□ -0.3
CNTN4-209ENST00000438282 NPHP3Q7Z494 1330 aa13.16□□□□□ -0.3
CNTN4-209ENST00000438282 PRKCSHP14314 528 aaPredicted RBP13.15□□□□□ -0.3
CNTN4-209ENST00000438282 FAM161AQ3B820 660 aa13.15□□□□□ -0.3
CNTN4-209ENST00000438282 NPM2Q86SE8 214 aaKnown RBP13.15□□□□□ -0.3
CNTN4-209ENST00000438282 CHMP4BQ9H444 224 aaKnown RBP13.15□□□□□ -0.3
CNTN4-209ENST00000438282 PDZRN3Q9UPQ7 1066 aa13.15□□□□□ -0.3
CNTN4-209ENST00000438282 NCAPD2Q15021 1401 aa13.15□□□□□ -0.3
CNTN4-209ENST00000438282 PXDNQ92626 1479 aa13.15□□□□□ -0.3
CNTN4-209ENST00000438282 HDAC1Q13547 482 aaPredicted RBP13.14□□□□□ -0.31
CNTN4-209ENST00000438282 KDM3BQ7LBC6 1761 aa13.14□□□□□ -0.31
CNTN4-209ENST00000438282 ZC3H6P61129 1189 aaKnown RBP13.13□□□□□ -0.31
CNTN4-209ENST00000438282 C8orf34Q49A92 452 aa13.13□□□□□ -0.31
CNTN4-209ENST00000438282 IL17REQ8NFR9 667 aa13.13□□□□□ -0.31
CNTN4-209ENST00000438282 RGS12O14924 1447 aa13.13□□□□□ -0.31
CNTN4-209ENST00000438282 COL18A1P39060 1754 aa13.13□□□□□ -0.31
CNTN4-209ENST00000438282 PLEKHO1Q53GL0 409 aaPredicted RBP13.12□□□□□ -0.31
CNTN4-209ENST00000438282 ZNF530Q6P9A1 599 aaPredicted RBP13.12□□□□□ -0.31
CNTN4-209ENST00000438282 PTPRCP08575 1304 aa13.12□□□□□ -0.31
CNTN4-209ENST00000438282 ZNF335Q9H4Z2 1342 aaPredicted RBP13.12□□□□□ -0.31
CNTN4-209ENST00000438282 ZBTB7BO15156 539 aaPredicted RBP13.12□□□□□ -0.31
CNTN4-209ENST00000438282 AXIN2Q9Y2T1 843 aa13.12□□□□□ -0.31
CNTN4-209ENST00000438282 CACNA1FO60840 1977 aa13.11□□□□□ -0.31
CNTN4-209ENST00000438282 TAF7Q15545 349 aaPredicted RBP13.11□□□□□ -0.31
CNTN4-209ENST00000438282 C1orf115Q9H7X2 142 aa13.11□□□□□ -0.31
CNTN4-209ENST00000438282 ERICH6Q7L0X2 663 aa13.11□□□□□ -0.31
CNTN4-209ENST00000438282 BABAM1Q9NWV8 329 aa13.11□□□□□ -0.31
CNTN4-209ENST00000438282 CEMIPQ8WUJ3 1361 aa13.1□□□□□ -0.31
CNTN4-209ENST00000438282 ABCC6O95255 1503 aa13.1□□□□□ -0.31
CNTN4-209ENST00000438282 ERBB3P21860 1342 aa13.1□□□□□ -0.31
CNTN4-209ENST00000438282 SLC4A2P04920 1241 aa13.1□□□□□ -0.31
CNTN4-209ENST00000438282 AMOTQ4VCS5 1084 aa13.1□□□□□ -0.31
CNTN4-209ENST00000438282 AKAP4Q5JQC9 854 aa13.1□□□□□ -0.31
CNTN4-209ENST00000438282 SPATA31A3Q5VYP0 1347 aa13.09□□□□□ -0.31
CNTN4-209ENST00000438282 BRINP3Q76B58 766 aa13.09□□□□□ -0.31
CNTN4-209ENST00000438282 IPO9Q96P70 1041 aaKnown RBP13.09□□□□□ -0.31
CNTN4-209ENST00000438282 STK31Q9BXU1 1019 aa13.09□□□□□ -0.31
CNTN4-209ENST00000438282 C1orf141Q5JVX7 400 aa13.08□□□□□ -0.31
CNTN4-209ENST00000438282 INTS3Q68E01 1043 aaKnown RBP13.08□□□□□ -0.31
CNTN4-209ENST00000438282 SMC5Q8IY18 1101 aa13.08□□□□□ -0.31
CNTN4-209ENST00000438282 CABLES1Q8TDN4 633 aa13.08□□□□□ -0.31
CNTN4-209ENST00000438282 LGR6Q9HBX8 967 aa13.08□□□□□ -0.32
CNTN4-209ENST00000438282 SIPA1L3O60292 1781 aaPredicted RBP13.08□□□□□ -0.32
CNTN4-209ENST00000438282 N4BP2Q86UW6 1770 aaPredicted RBP13.08□□□□□ -0.32
CNTN4-209ENST00000438282 SOS1Q07889 1333 aaPredicted RBP13.08□□□□□ -0.32
CNTN4-209ENST00000438282 OVOS2A0A0G2JMS6 1433 aa13.07□□□□□ -0.32
CNTN4-209ENST00000438282 CCDC30Q5VVM6 783 aa13.07□□□□□ -0.32
CNTN4-209ENST00000438282 G2E3Q7L622 706 aa13.07□□□□□ -0.32
CNTN4-209ENST00000438282 ABCA3Q99758 1704 aa13.07□□□□□ -0.32
CNTN4-209ENST00000438282 TEFQ10587 303 aa13.06□□□□□ -0.32
CNTN4-209ENST00000438282 MPRIPQ6WCQ1 1025 aa13.06□□□□□ -0.32
CNTN4-209ENST00000438282 NECTIN2Q92692 538 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms