RNA–Protein interactions for RNA: ENST00000438067.5

PTCH2-202, Transcript of patched 2, humanhuman

TSL 3

Gene PTCH2, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-202ENST00000438067 NBPF6Q5VWK0 638 aa24.32■■□□□ 1.48
PTCH2-202ENST00000438067 NBPF4Q96M43 638 aa24.32■■□□□ 1.48
PTCH2-202ENST00000438067 RRS1Q15050 365 aaKnown RBP24.31■■□□□ 1.48
PTCH2-202ENST00000438067 NSD2O96028 1365 aa24.3■■□□□ 1.48
PTCH2-202ENST00000438067 POLD1P28340 1107 aa24.3■■□□□ 1.48
PTCH2-202ENST00000438067 GGNBP2Q9H3C7 697 aa24.3■■□□□ 1.48
PTCH2-202ENST00000438067 FAM208AQ9UK61 1670 aaKnown RBP24.3■■□□□ 1.48
PTCH2-202ENST00000438067 MEGF6O75095 1541 aa24.29■■□□□ 1.48
PTCH2-202ENST00000438067 RTL1A6NKG5 1358 aa24.29■■□□□ 1.48
PTCH2-202ENST00000438067 GPR162Q16538 588 aa24.28■■□□□ 1.48
PTCH2-202ENST00000438067 TMF1P82094 1093 aa24.27■■□□□ 1.48
PTCH2-202ENST00000438067 KLHL34Q8N239 644 aa24.27■■□□□ 1.48
PTCH2-202ENST00000438067 USHBP1Q8N6Y0 703 aa24.27■■□□□ 1.48
PTCH2-202ENST00000438067 CCNL1Q9UK58 526 aaPredicted RBP24.27■■□□□ 1.48
PTCH2-202ENST00000438067 RAPGEF4Q8WZA2 1011 aa24.26■■□□□ 1.47
PTCH2-202ENST00000438067 CGNL1Q0VF96 1302 aa24.26■■□□□ 1.47
PTCH2-202ENST00000438067 HSP90AB2PQ58FF8 381 aa24.23■■□□□ 1.47
PTCH2-202ENST00000438067 USP47Q96K76 1375 aa24.23■■□□□ 1.47
PTCH2-202ENST00000438067 TATP17735 454 aaPredicted RBP24.22■■□□□ 1.47
PTCH2-202ENST00000438067 COL23A1Q86Y22 540 aaPredicted RBP24.21■■□□□ 1.47
PTCH2-202ENST00000438067 DOT1LQ8TEK3 1739 aa24.21■■□□□ 1.47
PTCH2-202ENST00000438067 SMG6Q86US8 1419 aaKnown RBP24.2■■□□□ 1.46
PTCH2-202ENST00000438067 INSRP06213 1382 aa24.2■■□□□ 1.46
PTCH2-202ENST00000438067 MSH5O43196 834 aa24.2■■□□□ 1.46
PTCH2-202ENST00000438067 NLGN2Q8NFZ4 835 aa24.2■■□□□ 1.46
PTCH2-202ENST00000438067 RGPD2P0DJD1 1756 aa24.2■■□□□ 1.46
PTCH2-202ENST00000438067 QSER1Q2KHR3 1735 aa24.2■■□□□ 1.46
PTCH2-202ENST00000438067 PELP1Q8IZL8 1130 aaKnown RBP24.19■■□□□ 1.46
PTCH2-202ENST00000438067 GOLGB1Q14789 3259 aaKnown RBP24.19■■□□□ 1.46
PTCH2-202ENST00000438067 SHANK3Q9BYB0 1731 aa24.18■■□□□ 1.46
PTCH2-202ENST00000438067 CDCA8Q53HL2 280 aa24.18■■□□□ 1.46
PTCH2-202ENST00000438067 LY75O60449 1722 aa24.17■■□□□ 1.46
PTCH2-202ENST00000438067 FLT4P35916 1363 aa24.16■■□□□ 1.46
PTCH2-202ENST00000438067 PCDH11XQ9BZA7 1347 aa24.16■■□□□ 1.46
PTCH2-202ENST00000438067 PCDH11YQ9BZA8 1340 aa24.16■■□□□ 1.46
PTCH2-202ENST00000438067 COL24A1Q17RW2 1714 aa24.16■■□□□ 1.46
PTCH2-202ENST00000438067 CARD14Q9BXL6 1004 aa24.16■■□□□ 1.46
PTCH2-202ENST00000438067 KIF24Q5T7B8 1368 aa24.16■■□□□ 1.46
PTCH2-202ENST00000438067 CYP27B1O15528 508 aa24.15■■□□□ 1.46
PTCH2-202ENST00000438067 C1QTNF8P60827 252 aa24.15■■□□□ 1.46
PTCH2-202ENST00000438067 CHD4Q14839 1912 aa24.15■■□□□ 1.46
PTCH2-202ENST00000438067 MPRIPQ6WCQ1 1025 aa24.14■■□□□ 1.45
PTCH2-202ENST00000438067 TUBGCP6Q96RT7 1819 aa24.13■■□□□ 1.45
PTCH2-202ENST00000438067 HMGB2P26583 209 aaKnown RBP24.13■■□□□ 1.45
PTCH2-202ENST00000438067 MSL1Q68DK7 614 aa24.13■■□□□ 1.45
PTCH2-202ENST00000438067 EMILIN1Q9Y6C2 1016 aa24.12■■□□□ 1.45
PTCH2-202ENST00000438067 PALLDQ8WX93 1383 aa24.12■■□□□ 1.45
PTCH2-202ENST00000438067 YBX3P16989 372 aaKnown RBP eCLIP24.1■■□□□ 1.45
PTCH2-202ENST00000438067 FLAD1Q8NFF5 587 aa24.1■■□□□ 1.45
PTCH2-202ENST00000438067 SENP3-EIF4A1A0A087X0R7 540 aa24.09■■□□□ 1.45
PTCH2-202ENST00000438067 GRIN3BO60391 1043 aa24.09■■□□□ 1.45
PTCH2-202ENST00000438067 SMARCC1Q92922 1105 aaPredicted RBP24.09■■□□□ 1.45
PTCH2-202ENST00000438067 PPM1GO15355 546 aaPredicted RBP24.08■■□□□ 1.45
PTCH2-202ENST00000438067 NKX1-1Q15270 411 aaPredicted RBP24.07■■□□□ 1.44
PTCH2-202ENST00000438067 PIGBQ92521 554 aa24.07■■□□□ 1.44
PTCH2-202ENST00000438067 NSD3Q9BZ95 1437 aa24.07■■□□□ 1.44
PTCH2-202ENST00000438067 TRIM26Q12899 539 aaPredicted RBP24.06■■□□□ 1.44
PTCH2-202ENST00000438067 CD2APQ9Y5K6 639 aa24.06■■□□□ 1.44
PTCH2-202ENST00000438067 SPG7Q9UQ90 795 aa24.05■■□□□ 1.44
PTCH2-202ENST00000438067 GIGYF1O75420 1035 aaPredicted RBP24.04■■□□□ 1.44
PTCH2-202ENST00000438067 AMIGO3Q86WK7 504 aa24.04■■□□□ 1.44
PTCH2-202ENST00000438067 AK7Q96M32 723 aa24.04■■□□□ 1.44
PTCH2-202ENST00000438067 WASHC2AQ641Q2 1341 aa24.04■■□□□ 1.44
PTCH2-202ENST00000438067 EYA1Q99502 592 aa24.03■■□□□ 1.44
PTCH2-202ENST00000438067 NCAPD2Q15021 1401 aa24.02■■□□□ 1.44
PTCH2-202ENST00000438067 KIF20BQ96Q89 1820 aa24.02■■□□□ 1.44
PTCH2-202ENST00000438067 C5P01031 1676 aa24.02■■□□□ 1.44
PTCH2-202ENST00000438067 SMIM5Q71RC9 77 aa24.01■■□□□ 1.43
PTCH2-202ENST00000438067 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.01■■□□□ 1.43
PTCH2-202ENST00000438067 POLKQ9UBT6 870 aa24■■□□□ 1.43
PTCH2-202ENST00000438067 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.99■■□□□ 1.43
PTCH2-202ENST00000438067 LOC102724428A0A0B4J2F2 783 aa23.99■■□□□ 1.43
PTCH2-202ENST00000438067 PHF14O94880 888 aa23.99■■□□□ 1.43
PTCH2-202ENST00000438067 SIK1P57059 783 aa23.99■■□□□ 1.43
PTCH2-202ENST00000438067 TIMELESSQ9UNS1 1208 aa23.98■■□□□ 1.43
PTCH2-202ENST00000438067 LINC00116Q8NCU8 138 aa23.97■■□□□ 1.43
PTCH2-202ENST00000438067 TMOD3Q9NYL9 352 aa23.97■■□□□ 1.43
PTCH2-202ENST00000438067 ASAP1Q9ULH1 1129 aa23.97■■□□□ 1.43
PTCH2-202ENST00000438067 TOGARAM1Q9Y4F4 1720 aa23.97■■□□□ 1.43
PTCH2-202ENST00000438067 C4BP0C0L5 1744 aa23.96■■□□□ 1.43
PTCH2-202ENST00000438067 SSFA2P28290 1259 aa23.96■■□□□ 1.43
PTCH2-202ENST00000438067 IFNL2Q8IZJ0 200 aa23.96■■□□□ 1.43
PTCH2-202ENST00000438067 PKD1L3Q7Z443 1732 aa23.96■■□□□ 1.43
PTCH2-202ENST00000438067 PHKG2P15735 406 aa23.95■■□□□ 1.42
PTCH2-202ENST00000438067 TAF1LQ8IZX4 1826 aa23.95■■□□□ 1.42
PTCH2-202ENST00000438067 ITPK1Q13572 414 aa23.94■■□□□ 1.42
PTCH2-202ENST00000438067 EIF4A2Q14240 407 aaKnown RBP23.93■■□□□ 1.42
PTCH2-202ENST00000438067 ITGB4P16144 1822 aa23.93■■□□□ 1.42
PTCH2-202ENST00000438067 ATP6V1AP38606 617 aa23.92■■□□□ 1.42
PTCH2-202ENST00000438067 TNNT2P45379 298 aaPredicted RBP23.92■■□□□ 1.42
PTCH2-202ENST00000438067 POLR3GLQ9BT43 218 aa23.92■■□□□ 1.42
PTCH2-202ENST00000438067 ATG3Q9NT62 314 aa23.92■■□□□ 1.42
PTCH2-202ENST00000438067 GNPATO15228 680 aa23.91■■□□□ 1.42
PTCH2-202ENST00000438067 ATP10DQ9P241 1426 aa23.91■■□□□ 1.42
PTCH2-202ENST00000438067 IGSF1Q8N6C5 1336 aa23.9■■□□□ 1.42
PTCH2-202ENST00000438067 ANKRD26Q9UPS8 1709 aa23.9■■□□□ 1.42
PTCH2-202ENST00000438067 CEP350Q5VT06 3117 aa23.89■■□□□ 1.42
PTCH2-202ENST00000438067 WWC3Q9ULE0 1092 aa23.89■■□□□ 1.41
PTCH2-202ENST00000438067 MAP2P11137 1827 aaKnown RBP23.88■■□□□ 1.41
PTCH2-202ENST00000438067 GPBP1L1Q9HC44 474 aaPredicted RBP23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms