RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 EIF5P55010 431 aaKnown RBP13.46□□□□□ -0.25
PTCH1-209ENST00000437951 TTC31Q49AM3 519 aaPredicted RBP13.46□□□□□ -0.25
PTCH1-209ENST00000437951 STMN4Q9H169 189 aaPredicted RBP13.46□□□□□ -0.25
PTCH1-209ENST00000437951 UVSSAQ2YD98 709 aa13.46□□□□□ -0.25
PTCH1-209ENST00000437951 LARP1BQ659C4 914 aaKnown RBP13.46□□□□□ -0.25
PTCH1-209ENST00000437951 CLGNO14967 610 aa13.46□□□□□ -0.26
PTCH1-209ENST00000437951 RSRC1Q96IZ7 334 aaKnown RBP13.46□□□□□ -0.26
PTCH1-209ENST00000437951 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.46□□□□□ -0.26
PTCH1-209ENST00000437951 CUX2O14529 1486 aa13.45□□□□□ -0.26
PTCH1-209ENST00000437951 CFAP100Q494V2 611 aa13.45□□□□□ -0.26
PTCH1-209ENST00000437951 MSL1Q68DK7 614 aa13.45□□□□□ -0.26
PTCH1-209ENST00000437951 SREK1Q8WXA9 508 aaKnown RBP13.45□□□□□ -0.26
PTCH1-209ENST00000437951 TNNT1P13805 278 aa13.45□□□□□ -0.26
PTCH1-209ENST00000437951 FKBP15Q5T1M5 1219 aa13.45□□□□□ -0.26
PTCH1-209ENST00000437951 NOL3O60936 208 aaKnown RBP13.45□□□□□ -0.26
PTCH1-209ENST00000437951 LMAN1P49257 510 aa13.45□□□□□ -0.26
PTCH1-209ENST00000437951 BCCIPQ9P287 314 aaKnown RBP eCLIP13.45□□□□□ -0.26
PTCH1-209ENST00000437951 KIF4BQ2VIQ3 1234 aa13.44□□□□□ -0.26
PTCH1-209ENST00000437951 HOOK3Q86VS8 718 aa13.44□□□□□ -0.26
PTCH1-209ENST00000437951 LTV1Q96GA3 475 aaPredicted RBP13.44□□□□□ -0.26
PTCH1-209ENST00000437951 ST20-MTHFSA0A0A6YYL1 179 aa13.44□□□□□ -0.26
PTCH1-209ENST00000437951 HSF2BPO75031 334 aa13.44□□□□□ -0.26
PTCH1-209ENST00000437951 SH3BGRP55822 239 aaPredicted RBP13.44□□□□□ -0.26
PTCH1-209ENST00000437951 CKAP4Q07065 602 aaKnown RBP13.44□□□□□ -0.26
PTCH1-209ENST00000437951 CCDC113Q9H0I3 377 aa13.44□□□□□ -0.26
PTCH1-209ENST00000437951 CEP83Q9Y592 693 aa13.44□□□□□ -0.26
PTCH1-209ENST00000437951 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.43□□□□□ -0.26
PTCH1-209ENST00000437951 CCDC150Q8NCX0 1101 aa13.43□□□□□ -0.26
PTCH1-209ENST00000437951 SYTL4Q96C24 671 aaPredicted RBP13.43□□□□□ -0.26
PTCH1-209ENST00000437951 SRRTQ9BXP5 876 aaKnown RBP13.43□□□□□ -0.26
PTCH1-209ENST00000437951 TMEM132AQ24JP5 1023 aa13.43□□□□□ -0.26
PTCH1-209ENST00000437951 SCAND2PQ9GZW5 306 aaPredicted RBP13.43□□□□□ -0.26
PTCH1-209ENST00000437951 FERP16591 822 aa13.43□□□□□ -0.26
PTCH1-209ENST00000437951 ANAPC15P60006 121 aa13.43□□□□□ -0.26
PTCH1-209ENST00000437951 PRDM2Q13029 1718 aa13.43□□□□□ -0.26
PTCH1-209ENST00000437951 NAP1L3Q99457 506 aaPredicted RBP13.43□□□□□ -0.26
PTCH1-209ENST00000437951 A0A1B0GUA9 196 aa13.43□□□□□ -0.26
PTCH1-209ENST00000437951 ZFYP08048 801 aaPredicted RBP13.43□□□□□ -0.26
PTCH1-209ENST00000437951 TOP1P11387 765 aaKnown RBP13.43□□□□□ -0.26
PTCH1-209ENST00000437951 CUX1P39880 1505 aa13.42□□□□□ -0.26
PTCH1-209ENST00000437951 HMGB1P1B2RPK0 211 aaPredicted RBP13.42□□□□□ -0.26
PTCH1-209ENST00000437951 URI1O94763 535 aaPredicted RBP13.42□□□□□ -0.26
PTCH1-209ENST00000437951 CLIP2Q9UDT6 1046 aa13.42□□□□□ -0.26
PTCH1-209ENST00000437951 ZSCAN25Q6NSZ9 544 aa13.42□□□□□ -0.26
PTCH1-209ENST00000437951 TTC14Q96N46 770 aa13.42□□□□□ -0.26
PTCH1-209ENST00000437951 SF3B2Q13435 895 aaKnown RBP13.42□□□□□ -0.26
PTCH1-209ENST00000437951 PHAXQ9H814 394 aaKnown RBP13.42□□□□□ -0.26
PTCH1-209ENST00000437951 SMG6Q86US8 1419 aaKnown RBP13.42□□□□□ -0.26
PTCH1-209ENST00000437951 TUBBP07437 444 aa13.42□□□□□ -0.26
PTCH1-209ENST00000437951 KIF5BP33176 963 aa13.42□□□□□ -0.26
PTCH1-209ENST00000437951 OPA1O60313 960 aa13.42□□□□□ -0.26
PTCH1-209ENST00000437951 SARNPP82979 210 aaKnown RBP13.42□□□□□ -0.26
PTCH1-209ENST00000437951 ZHX1Q9UKY1 873 aaPredicted RBP13.42□□□□□ -0.26
PTCH1-209ENST00000437951 FSD2A1L4K1 749 aa13.41□□□□□ -0.26
PTCH1-209ENST00000437951 DNAJC21Q5F1R6 531 aaKnown RBP13.41□□□□□ -0.26
PTCH1-209ENST00000437951 CCDC50Q8IVM0 306 aa13.41□□□□□ -0.26
PTCH1-209ENST00000437951 WASHC2CQ9Y4E1 1318 aa13.41□□□□□ -0.26
PTCH1-209ENST00000437951 ELL2O00472 640 aaPredicted RBP13.41□□□□□ -0.26
PTCH1-209ENST00000437951 CCDC6Q16204 474 aa13.41□□□□□ -0.26
PTCH1-209ENST00000437951 GSTTP1A0A1W2PQM5 241 aa13.41□□□□□ -0.26
PTCH1-209ENST00000437951 SYCE3A1L190 88 aa13.41□□□□□ -0.26
PTCH1-209ENST00000437951 GRIPAP1Q4V328 841 aa13.41□□□□□ -0.26
PTCH1-209ENST00000437951 YEATS4O95619 227 aa13.41□□□□□ -0.26
PTCH1-209ENST00000437951 IFI16Q16666 785 aaKnown RBP13.41□□□□□ -0.26
PTCH1-209ENST00000437951 FBF1Q8TES7 1133 aa13.41□□□□□ -0.26
PTCH1-209ENST00000437951 A6NNZ2 444 aa13.41□□□□□ -0.26
PTCH1-209ENST00000437951 TUBB8Q3ZCM7 444 aa13.41□□□□□ -0.26
PTCH1-209ENST00000437951 PLEKHH2Q8IVE3 1493 aa13.41□□□□□ -0.26
PTCH1-209ENST00000437951 CCDC69A6NI79 296 aa13.4□□□□□ -0.26
PTCH1-209ENST00000437951 NEBLO76041 1014 aa13.4□□□□□ -0.26
PTCH1-209ENST00000437951 EFCAB2Q5VUJ9 269 aa13.4□□□□□ -0.26
PTCH1-209ENST00000437951 NACAP1Q9BZK3 213 aa13.4□□□□□ -0.26
PTCH1-209ENST00000437951 SPECC1Q5M775 1068 aa13.4□□□□□ -0.26
PTCH1-209ENST00000437951 ARFGAP3Q9NP61 516 aa13.4□□□□□ -0.26
PTCH1-209ENST00000437951 TSG101Q99816 390 aa13.4□□□□□ -0.26
PTCH1-209ENST00000437951 PDZRN3Q9UPQ7 1066 aa13.4□□□□□ -0.26
PTCH1-209ENST00000437951 CCDC30Q5VVM6 783 aa13.4□□□□□ -0.26
PTCH1-209ENST00000437951 LIG1P18858 919 aa13.4□□□□□ -0.26
PTCH1-209ENST00000437951 CCDC155Q8N6L0 562 aa13.4□□□□□ -0.26
PTCH1-209ENST00000437951 GNAI2P04899 355 aa13.4□□□□□ -0.26
PTCH1-209ENST00000437951 ABCC8Q09428 1581 aa13.4□□□□□ -0.26
PTCH1-209ENST00000437951 CCDC94Q9BW85 323 aaPredicted RBP13.4□□□□□ -0.26
PTCH1-209ENST00000437951 GOPCQ9HD26 462 aa13.4□□□□□ -0.26
PTCH1-209ENST00000437951 CTNNA3Q9UI47 895 aa13.4□□□□□ -0.26
PTCH1-209ENST00000437951 GBP6Q6ZN66 633 aa13.4□□□□□ -0.27
PTCH1-209ENST00000437951 PYM1Q9BRP8 204 aaKnown RBP13.4□□□□□ -0.27
PTCH1-209ENST00000437951 SNW1Q13573 536 aaKnown RBP13.39□□□□□ -0.27
PTCH1-209ENST00000437951 CCDC178Q5BJE1 867 aa13.39□□□□□ -0.27
PTCH1-209ENST00000437951 SMAP1Q8IYB5 467 aaPredicted RBP13.39□□□□□ -0.27
PTCH1-209ENST00000437951 CEP135Q66GS9 1140 aa13.39□□□□□ -0.27
PTCH1-209ENST00000437951 EIF2S2P20042 333 aaKnown RBP13.39□□□□□ -0.27
PTCH1-209ENST00000437951 CLCN1P35523 988 aa13.39□□□□□ -0.27
PTCH1-209ENST00000437951 PANK1Q8TE04 598 aa13.39□□□□□ -0.27
PTCH1-209ENST00000437951 USH1CQ9Y6N9 552 aa13.39□□□□□ -0.27
PTCH1-209ENST00000437951 CEBPZQ03701 1054 aaKnown RBP13.39□□□□□ -0.27
PTCH1-209ENST00000437951 TSPYL4Q9UJ04 414 aa13.39□□□□□ -0.27
PTCH1-209ENST00000437951 UBE4AQ14139 1066 aa13.39□□□□□ -0.27
PTCH1-209ENST00000437951 DHX37Q8IY37 1157 aaKnown RBP13.38□□□□□ -0.27
PTCH1-209ENST00000437951 CCT4P50991 539 aaKnown RBP13.38□□□□□ -0.27
PTCH1-209ENST00000437951 NEUROD6Q96NK8 337 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms