RNA–Protein interactions for RNA: ENST00000437944.5

SCRN3-206, Transcript of secernin 3, humanhuman

TSL 2

Gene SCRN3, Length 1,141 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-206ENST00000437944 CRB1P82279 1406 aa16.53■□□□□ 0.24
SCRN3-206ENST00000437944 CARD10Q9BWT7 1032 aa16.53■□□□□ 0.24
SCRN3-206ENST00000437944 RSPH6AQ9H0K4 717 aa16.53■□□□□ 0.24
SCRN3-206ENST00000437944 NLRP2Q9NX02 1062 aa16.53■□□□□ 0.24
SCRN3-206ENST00000437944 BCL9LQ86UU0 1499 aa16.53■□□□□ 0.24
SCRN3-206ENST00000437944 HMOX1P09601 288 aa16.52■□□□□ 0.24
SCRN3-206ENST00000437944 LARP1Q6PKG0 1096 aaKnown RBP16.52■□□□□ 0.24
SCRN3-206ENST00000437944 TOM1L2Q6ZVM7 507 aa16.52■□□□□ 0.24
SCRN3-206ENST00000437944 AEBP1Q8IUX7 1158 aa16.52■□□□□ 0.24
SCRN3-206ENST00000437944 UNC5CLQ8IV45 518 aa16.52■□□□□ 0.24
SCRN3-206ENST00000437944 SOCS7O14512 581 aa16.5■□□□□ 0.23
SCRN3-206ENST00000437944 PRKAR2BP31323 418 aa16.5■□□□□ 0.23
SCRN3-206ENST00000437944 USHBP1Q8N6Y0 703 aa16.5■□□□□ 0.23
SCRN3-206ENST00000437944 RUNDC1Q96C34 613 aa16.5■□□□□ 0.23
SCRN3-206ENST00000437944 PLEKHF1Q96S99 279 aa16.5■□□□□ 0.23
SCRN3-206ENST00000437944 PLEKHG2Q9H7P9 1386 aa16.5■□□□□ 0.23
SCRN3-206ENST00000437944 USP21Q9UK80 565 aa16.49■□□□□ 0.23
SCRN3-206ENST00000437944 WNK3Q9BYP7 1800 aa16.49■□□□□ 0.23
SCRN3-206ENST00000437944 AFF2P51816 1311 aa16.48■□□□□ 0.23
SCRN3-206ENST00000437944 VPS72Q15906 364 aa16.48■□□□□ 0.23
SCRN3-206ENST00000437944 CCDC146Q8IYE0 955 aa16.48■□□□□ 0.23
SCRN3-206ENST00000437944 PARP4Q9UKK3 1724 aaKnown RBP16.48■□□□□ 0.23
SCRN3-206ENST00000437944 SPATA31A5Q5VU36 1347 aa16.47■□□□□ 0.23
SCRN3-206ENST00000437944 SPATA31A7Q8IWB4 1347 aa16.47■□□□□ 0.23
SCRN3-206ENST00000437944 NEFMP07197 916 aa16.47■□□□□ 0.23
SCRN3-206ENST00000437944 SPATA31A1Q5TZJ5 1347 aa16.46■□□□□ 0.23
SCRN3-206ENST00000437944 MAPK8IP3Q9UPT6 1336 aa16.46■□□□□ 0.23
SCRN3-206ENST00000437944 THRAP3Q9Y2W1 955 aaKnown RBP16.46■□□□□ 0.23
SCRN3-206ENST00000437944 RAPGEF4Q8WZA2 1011 aa16.45■□□□□ 0.22
SCRN3-206ENST00000437944 PHACTR3Q96KR7 559 aa16.45■□□□□ 0.22
SCRN3-206ENST00000437944 DLG5Q8TDM6 1919 aa16.45■□□□□ 0.22
SCRN3-206ENST00000437944 PKD1L3Q7Z443 1732 aa16.45■□□□□ 0.22
SCRN3-206ENST00000437944 MEGF6O75095 1541 aa16.45■□□□□ 0.22
SCRN3-206ENST00000437944 ATRNO75882 1429 aa16.45■□□□□ 0.22
SCRN3-206ENST00000437944 TATP17735 454 aaPredicted RBP16.44■□□□□ 0.22
SCRN3-206ENST00000437944 TCP11L2Q8N4U5 519 aa16.44■□□□□ 0.22
SCRN3-206ENST00000437944 DISP2A7MBM2 1401 aa16.44■□□□□ 0.22
SCRN3-206ENST00000437944 APAF1O14727 1248 aa16.43■□□□□ 0.22
SCRN3-206ENST00000437944 IL2RBP14784 551 aa16.43■□□□□ 0.22
SCRN3-206ENST00000437944 NGEFQ8N5V2 710 aa16.43■□□□□ 0.22
SCRN3-206ENST00000437944 RTN4Q9NQC3 1192 aaKnown RBP16.43■□□□□ 0.22
SCRN3-206ENST00000437944 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.43■□□□□ 0.22
SCRN3-206ENST00000437944 TRPC5Q9UL62 973 aaPredicted RBP16.43■□□□□ 0.22
SCRN3-206ENST00000437944 OVOS2A0A0G2JMS6 1433 aa16.43■□□□□ 0.22
SCRN3-206ENST00000437944 TMPOP42166 694 aaKnown RBP16.42■□□□□ 0.22
SCRN3-206ENST00000437944 VASPP50552 380 aaPredicted RBP16.42■□□□□ 0.22
SCRN3-206ENST00000437944 AMOTQ4VCS5 1084 aa16.42■□□□□ 0.22
SCRN3-206ENST00000437944 PLEKHO1Q53GL0 409 aaPredicted RBP16.42■□□□□ 0.22
SCRN3-206ENST00000437944 BARGINQ6ZT62 677 aa16.42■□□□□ 0.22
SCRN3-206ENST00000437944 CDCA7Q9BWT1 371 aaPredicted RBP16.42■□□□□ 0.22
SCRN3-206ENST00000437944 USP35Q9P2H5 1018 aa16.42■□□□□ 0.22
SCRN3-206ENST00000437944 CCDC9Q9Y3X0 531 aaKnown RBP16.42■□□□□ 0.22
SCRN3-206ENST00000437944 HNRNPUQ00839 825 aaKnown RBP eCLIP16.41■□□□□ 0.22
SCRN3-206ENST00000437944 NFE2L2Q16236 605 aa16.41■□□□□ 0.22
SCRN3-206ENST00000437944 ZNF772Q68DY9 489 aaPredicted RBP16.41■□□□□ 0.22
SCRN3-206ENST00000437944 GAS2L2Q8NHY3 880 aa16.41■□□□□ 0.22
SCRN3-206ENST00000437944 GLI3P10071 1580 aa16.41■□□□□ 0.22
SCRN3-206ENST00000437944 SHANK3Q9BYB0 1731 aa16.4■□□□□ 0.22
SCRN3-206ENST00000437944 MTHFSDQ2M296 383 aaKnown RBP16.4■□□□□ 0.22
SCRN3-206ENST00000437944 GJD4Q96KN9 370 aaPredicted RBP16.4■□□□□ 0.22
SCRN3-206ENST00000437944 QTRT2Q9H974 415 aaKnown RBP16.39■□□□□ 0.21
SCRN3-206ENST00000437944 SPG7Q9UQ90 795 aa16.39■□□□□ 0.21
SCRN3-206ENST00000437944 CCDC27Q2M243 656 aa16.38■□□□□ 0.21
SCRN3-206ENST00000437944 VIRMAQ69YN4 1812 aaKnown RBP16.38■□□□□ 0.21
SCRN3-206ENST00000437944 THSD7AQ9UPZ6 1657 aa16.37■□□□□ 0.21
SCRN3-206ENST00000437944 RIPK4P57078 832 aa16.37■□□□□ 0.21
SCRN3-206ENST00000437944 ZCRB1Q8TBF4 217 aaKnown RBP16.37■□□□□ 0.21
SCRN3-206ENST00000437944 YTHDC1Q96MU7 727 aaKnown RBP16.37■□□□□ 0.21
SCRN3-206ENST00000437944 RRP7AQ9Y3A4 280 aaKnown RBP16.37■□□□□ 0.21
SCRN3-206ENST00000437944 ONECUT3O60422 494 aaPredicted RBP16.36■□□□□ 0.21
SCRN3-206ENST00000437944 ZNF530Q6P9A1 599 aaPredicted RBP16.36■□□□□ 0.21
SCRN3-206ENST00000437944 LRRC37A3O60309 1634 aa16.36■□□□□ 0.21
SCRN3-206ENST00000437944 ZBED9Q6R2W3 1325 aa16.36■□□□□ 0.21
SCRN3-206ENST00000437944 SENP3-EIF4A1A0A087X0R7 540 aa16.35■□□□□ 0.21
SCRN3-206ENST00000437944 HTATSF1O43719 755 aaKnown RBP16.35■□□□□ 0.21
SCRN3-206ENST00000437944 LMOD3Q0VAK6 560 aa16.35■□□□□ 0.21
SCRN3-206ENST00000437944 NEUROD2Q15784 382 aa16.35■□□□□ 0.21
SCRN3-206ENST00000437944 AKAP4Q5JQC9 854 aa16.35■□□□□ 0.21
SCRN3-206ENST00000437944 RBM42Q9BTD8 480 aaKnown RBP16.35■□□□□ 0.21
SCRN3-206ENST00000437944 TRIM35Q9UPQ4 493 aa16.35■□□□□ 0.21
SCRN3-206ENST00000437944 MAP3K5Q99683 1374 aa16.35■□□□□ 0.21
SCRN3-206ENST00000437944 TNS2Q63HR2 1409 aa16.35■□□□□ 0.21
SCRN3-206ENST00000437944 ADAMTS7Q9UKP4 1686 aa16.34■□□□□ 0.21
SCRN3-206ENST00000437944 GNAT3A8MTJ3 354 aa16.34■□□□□ 0.21
SCRN3-206ENST00000437944 EXOC5O00471 708 aa16.34■□□□□ 0.21
SCRN3-206ENST00000437944 FAM98CQ17RN3 349 aaKnown RBP16.34■□□□□ 0.21
SCRN3-206ENST00000437944 C1orf141Q5JVX7 400 aa16.34■□□□□ 0.21
SCRN3-206ENST00000437944 IFNL2Q8IZJ0 200 aa16.34■□□□□ 0.21
SCRN3-206ENST00000437944 RGS17Q9UGC6 210 aaPredicted RBP16.34■□□□□ 0.21
SCRN3-206ENST00000437944 ZNF521Q96K83 1311 aa16.34■□□□□ 0.21
SCRN3-206ENST00000437944 PCDH11XQ9BZA7 1347 aa16.34■□□□□ 0.21
SCRN3-206ENST00000437944 PCDH11YQ9BZA8 1340 aa16.34■□□□□ 0.21
SCRN3-206ENST00000437944 SCN11AQ9UI33 1791 aa16.33■□□□□ 0.21
SCRN3-206ENST00000437944 CYP27B1O15528 508 aa16.33■□□□□ 0.2
SCRN3-206ENST00000437944 PHKG2P15735 406 aa16.33■□□□□ 0.2
SCRN3-206ENST00000437944 RBM6P78332 1123 aaKnown RBP16.33■□□□□ 0.2
SCRN3-206ENST00000437944 WWC1Q8IX03 1113 aa16.33■□□□□ 0.2
SCRN3-206ENST00000437944 SALL2Q9Y467 1007 aaPredicted RBP16.33■□□□□ 0.2
SCRN3-206ENST00000437944 DDB1Q16531 1140 aa16.32■□□□□ 0.2
SCRN3-206ENST00000437944 HSP90AB1P08238 724 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms