RNA–Protein interactions for RNA: ENST00000437811.1

HLA-DPA1-243, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-243ENST00000437811 GNAI1P63096 354 aa17.63■□□□□ 0.41
HLA-DPA1-243ENST00000437811 TSR2Q969E8 191 aaKnown RBP17.63■□□□□ 0.41
HLA-DPA1-243ENST00000437811 HTATSF1O43719 755 aaKnown RBP17.62■□□□□ 0.41
HLA-DPA1-243ENST00000437811 ZNF853P0CG23 659 aa17.62■□□□□ 0.41
HLA-DPA1-243ENST00000437811 MAP3K5Q99683 1374 aa17.62■□□□□ 0.41
HLA-DPA1-243ENST00000437811 COL5A2P05997 1499 aaPredicted RBP17.61■□□□□ 0.41
HLA-DPA1-243ENST00000437811 CT47B1P0C2W7 299 aaPredicted RBP17.61■□□□□ 0.41
HLA-DPA1-243ENST00000437811 DCTN1Q14203 1278 aa17.61■□□□□ 0.41
HLA-DPA1-243ENST00000437811 CRB1P82279 1406 aa17.61■□□□□ 0.41
HLA-DPA1-243ENST00000437811 PLEKHG2Q9H7P9 1386 aa17.6■□□□□ 0.41
HLA-DPA1-243ENST00000437811 UBAP1LF5GYI3 381 aa17.6■□□□□ 0.41
HLA-DPA1-243ENST00000437811 CSB-PGBD3P0DP91 1061 aa17.6■□□□□ 0.41
HLA-DPA1-243ENST00000437811 NLRP2Q9NX02 1062 aa17.6■□□□□ 0.41
HLA-DPA1-243ENST00000437811 COL14A1Q05707 1796 aaKnown RBP17.6■□□□□ 0.41
HLA-DPA1-243ENST00000437811 PIP4K2BP78356 416 aa17.59■□□□□ 0.41
HLA-DPA1-243ENST00000437811 EXOSC9Q06265 439 aaKnown RBP17.59■□□□□ 0.41
HLA-DPA1-243ENST00000437811 MCM10Q7L590 875 aa17.59■□□□□ 0.41
HLA-DPA1-243ENST00000437811 RTF1Q92541 710 aaKnown RBP17.59■□□□□ 0.41
HLA-DPA1-243ENST00000437811 CFAP44Q96MT7 982 aa17.59■□□□□ 0.41
HLA-DPA1-243ENST00000437811 GNAT3A8MTJ3 354 aa17.58■□□□□ 0.4
HLA-DPA1-243ENST00000437811 AMOTQ4VCS5 1084 aa17.58■□□□□ 0.4
HLA-DPA1-243ENST00000437811 PLEKHO1Q53GL0 409 aaPredicted RBP17.58■□□□□ 0.4
HLA-DPA1-243ENST00000437811 LAS1LQ9Y4W2 734 aaKnown RBP17.58■□□□□ 0.4
HLA-DPA1-243ENST00000437811 WDR17Q8IZU2 1322 aa17.58■□□□□ 0.4
HLA-DPA1-243ENST00000437811 MBIPQ9NS73 344 aa17.57■□□□□ 0.4
HLA-DPA1-243ENST00000437811 DCAF8L1A6NGE4 600 aa17.56■□□□□ 0.4
HLA-DPA1-243ENST00000437811 RARSP54136 660 aaKnown RBP17.56■□□□□ 0.4
HLA-DPA1-243ENST00000437811 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.56■□□□□ 0.4
HLA-DPA1-243ENST00000437811 CERKQ8TCT0 537 aa17.56■□□□□ 0.4
HLA-DPA1-243ENST00000437811 MEGF6O75095 1541 aa17.56■□□□□ 0.4
HLA-DPA1-243ENST00000437811 PKD1L3Q7Z443 1732 aa17.56■□□□□ 0.4
HLA-DPA1-243ENST00000437811 ZNF530Q6P9A1 599 aaPredicted RBP17.55■□□□□ 0.4
HLA-DPA1-243ENST00000437811 RAPGEF4Q8WZA2 1011 aa17.55■□□□□ 0.4
HLA-DPA1-243ENST00000437811 PARP4Q9UKK3 1724 aaKnown RBP17.55■□□□□ 0.4
HLA-DPA1-243ENST00000437811 CHL1O00533 1208 aa17.54■□□□□ 0.4
HLA-DPA1-243ENST00000437811 PLIN1O60240 522 aa17.54■□□□□ 0.4
HLA-DPA1-243ENST00000437811 BCAR3O75815 825 aa17.54■□□□□ 0.4
HLA-DPA1-243ENST00000437811 TATP17735 454 aaPredicted RBP17.54■□□□□ 0.4
HLA-DPA1-243ENST00000437811 ADAMTS7Q9UKP4 1686 aa17.54■□□□□ 0.4
HLA-DPA1-243ENST00000437811 AKAP4Q5JQC9 854 aa17.53■□□□□ 0.4
HLA-DPA1-243ENST00000437811 CEMIPQ8WUJ3 1361 aa17.53■□□□□ 0.4
HLA-DPA1-243ENST00000437811 OVOS2A0A0G2JMS6 1433 aa17.53■□□□□ 0.4
HLA-DPA1-243ENST00000437811 IL17REQ8NFR9 667 aa17.53■□□□□ 0.4
HLA-DPA1-243ENST00000437811 PLCH1Q4KWH8 1693 aa17.52■□□□□ 0.4
HLA-DPA1-243ENST00000437811 VIRMAQ69YN4 1812 aaKnown RBP17.52■□□□□ 0.39
HLA-DPA1-243ENST00000437811 TOM1L2Q6ZVM7 507 aa17.52■□□□□ 0.39
HLA-DPA1-243ENST00000437811 ZNF428Q96B54 188 aa17.52■□□□□ 0.39
HLA-DPA1-243ENST00000437811 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.52■□□□□ 0.39
HLA-DPA1-243ENST00000437811 C1orf141Q5JVX7 400 aa17.51■□□□□ 0.39
HLA-DPA1-243ENST00000437811 CARD10Q9BWT7 1032 aa17.51■□□□□ 0.39
HLA-DPA1-243ENST00000437811 PPP4R2Q9NY27 417 aa17.51■□□□□ 0.39
HLA-DPA1-243ENST00000437811 BABAM1Q9NWV8 329 aa17.5■□□□□ 0.39
HLA-DPA1-243ENST00000437811 NRAPQ86VF7 1730 aa17.49■□□□□ 0.39
HLA-DPA1-243ENST00000437811 EVA1CP58658 441 aa17.49■□□□□ 0.39
HLA-DPA1-243ENST00000437811 ALDH1L2Q3SY69 923 aa17.49■□□□□ 0.39
HLA-DPA1-243ENST00000437811 LARP1Q6PKG0 1096 aaKnown RBP17.49■□□□□ 0.39
HLA-DPA1-243ENST00000437811 STRN4Q9NRL3 753 aa17.49■□□□□ 0.39
HLA-DPA1-243ENST00000437811 SPG7Q9UQ90 795 aa17.49■□□□□ 0.39
HLA-DPA1-243ENST00000437811 VAMP4O75379 141 aa17.48■□□□□ 0.39
HLA-DPA1-243ENST00000437811 C20orf194Q5TEA3 1177 aa17.48■□□□□ 0.39
HLA-DPA1-243ENST00000437811 TSPYL6Q8N831 410 aa17.48■□□□□ 0.39
HLA-DPA1-243ENST00000437811 C8orf58Q8NAV2 365 aa17.48■□□□□ 0.39
HLA-DPA1-243ENST00000437811 SSH1Q8WYL5 1049 aa17.48■□□□□ 0.39
HLA-DPA1-243ENST00000437811 BCL2L13Q9BXK5 485 aa17.48■□□□□ 0.39
HLA-DPA1-243ENST00000437811 SMC4Q9NTJ3 1288 aa17.48■□□□□ 0.39
HLA-DPA1-243ENST00000437811 BTG4Q9NY30 223 aa17.48■□□□□ 0.39
HLA-DPA1-243ENST00000437811 TSPYL4Q9UJ04 414 aa17.48■□□□□ 0.39
HLA-DPA1-243ENST00000437811 KDM3BQ7LBC6 1761 aa17.48■□□□□ 0.39
HLA-DPA1-243ENST00000437811 JCADQ9P266 1359 aa17.47■□□□□ 0.39
HLA-DPA1-243ENST00000437811 SIPA1L3O60292 1781 aaPredicted RBP17.47■□□□□ 0.39
HLA-DPA1-243ENST00000437811 SCN11AQ9UI33 1791 aa17.47■□□□□ 0.39
HLA-DPA1-243ENST00000437811 RNMTO43148 476 aaKnown RBP17.47■□□□□ 0.39
HLA-DPA1-243ENST00000437811 TWISTNBQ3B726 338 aaPredicted RBP17.47■□□□□ 0.39
HLA-DPA1-243ENST00000437811 EXOC6Q8TAG9 804 aa17.47■□□□□ 0.39
HLA-DPA1-243ENST00000437811 LGR6Q9HBX8 967 aa17.47■□□□□ 0.39
HLA-DPA1-243ENST00000437811 CANXP27824 592 aaKnown RBP17.46■□□□□ 0.39
HLA-DPA1-243ENST00000437811 TAF7Q15545 349 aaPredicted RBP17.46■□□□□ 0.39
HLA-DPA1-243ENST00000437811 CRBNQ96SW2 442 aa17.46■□□□□ 0.39
HLA-DPA1-243ENST00000437811 NWD2Q9ULI1 1742 aa17.46■□□□□ 0.39
HLA-DPA1-243ENST00000437811 PHKG2P15735 406 aa17.45■□□□□ 0.38
HLA-DPA1-243ENST00000437811 PDE3AQ14432 1141 aa17.45■□□□□ 0.38
HLA-DPA1-243ENST00000437811 MPRIPQ6WCQ1 1025 aa17.45■□□□□ 0.38
HLA-DPA1-243ENST00000437811 MIS18AQ9NYP9 233 aa17.45■□□□□ 0.38
HLA-DPA1-243ENST00000437811 SHANK3Q9BYB0 1731 aa17.45■□□□□ 0.38
HLA-DPA1-243ENST00000437811 KDM6AO15550 1401 aaPredicted RBP17.45■□□□□ 0.38
HLA-DPA1-243ENST00000437811 WNK3Q9BYP7 1800 aa17.45■□□□□ 0.38
HLA-DPA1-243ENST00000437811 IL2RBP14784 551 aa17.44■□□□□ 0.38
HLA-DPA1-243ENST00000437811 BRPF1P55201 1214 aaPredicted RBP17.44■□□□□ 0.38
HLA-DPA1-243ENST00000437811 IFNL2Q8IZJ0 200 aa17.44■□□□□ 0.38
HLA-DPA1-243ENST00000437811 FRAT1Q92837 279 aaPredicted RBP17.44■□□□□ 0.38
HLA-DPA1-243ENST00000437811 KIF16BQ96L93 1317 aa17.44■□□□□ 0.38
HLA-DPA1-243ENST00000437811 MRC1P22897 1456 aa17.43■□□□□ 0.38
HLA-DPA1-243ENST00000437811 ELL2O00472 640 aaPredicted RBP17.43■□□□□ 0.38
HLA-DPA1-243ENST00000437811 ADAMTS2O95450 1211 aa17.43■□□□□ 0.38
HLA-DPA1-243ENST00000437811 TEFQ10587 303 aa17.43■□□□□ 0.38
HLA-DPA1-243ENST00000437811 NUTM2BA6NNL0 878 aaPredicted RBP17.42■□□□□ 0.38
HLA-DPA1-243ENST00000437811 NUTM2EB1AL46 878 aaPredicted RBP17.42■□□□□ 0.38
HLA-DPA1-243ENST00000437811 KRT24Q2M2I5 525 aa17.42■□□□□ 0.38
HLA-DPA1-243ENST00000437811 ZKSCAN2Q63HK3 967 aa17.42■□□□□ 0.38
HLA-DPA1-243ENST00000437811 NUTM2AQ8IVF1 878 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms