RNA–Protein interactions for RNA: ENST00000437201.5

SBDSP1-203, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 1 (best)

Gene SBDSP1, Length 839 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-203ENST00000437201 USHBP1Q8N6Y0 703 aa24.13■■□□□ 1.45
SBDSP1-203ENST00000437201 PANK3Q9H999 370 aa24.13■■□□□ 1.45
SBDSP1-203ENST00000437201 MEGF6O75095 1541 aa24.13■■□□□ 1.45
SBDSP1-203ENST00000437201 WASHC2AQ641Q2 1341 aa24.12■■□□□ 1.45
SBDSP1-203ENST00000437201 SLC15A2Q16348 729 aa24.12■■□□□ 1.45
SBDSP1-203ENST00000437201 SYTL4Q96C24 671 aaPredicted RBP24.12■■□□□ 1.45
SBDSP1-203ENST00000437201 PPP1R1BQ9UD71 204 aaPredicted RBP24.11■■□□□ 1.45
SBDSP1-203ENST00000437201 RGPD2P0DJD1 1756 aa24.11■■□□□ 1.45
SBDSP1-203ENST00000437201 PRIM1P49642 420 aaKnown RBP24.1■■□□□ 1.45
SBDSP1-203ENST00000437201 SLC27A3Q5K4L6 730 aa24.09■■□□□ 1.45
SBDSP1-203ENST00000437201 PCDH11XQ9BZA7 1347 aa24.09■■□□□ 1.45
SBDSP1-203ENST00000437201 PCDH11YQ9BZA8 1340 aa24.09■■□□□ 1.45
SBDSP1-203ENST00000437201 NSD2O96028 1365 aa24.08■■□□□ 1.45
SBDSP1-203ENST00000437201 KAT6BQ8WYB5 2073 aa24.08■■□□□ 1.45
SBDSP1-203ENST00000437201 POLKQ9UBT6 870 aa24.08■■□□□ 1.45
SBDSP1-203ENST00000437201 BTAF1O14981 1849 aa24.07■■□□□ 1.44
SBDSP1-203ENST00000437201 TNNT2P45379 298 aaPredicted RBP24.05■■□□□ 1.44
SBDSP1-203ENST00000437201 KNSTRNQ9Y448 316 aa24.05■■□□□ 1.44
SBDSP1-203ENST00000437201 HMGB2P26583 209 aaKnown RBP24.04■■□□□ 1.44
SBDSP1-203ENST00000437201 SPG7Q9UQ90 795 aa24.03■■□□□ 1.44
SBDSP1-203ENST00000437201 ANKRD26Q9UPS8 1709 aa24.03■■□□□ 1.44
SBDSP1-203ENST00000437201 EYA1Q99502 592 aa24.02■■□□□ 1.44
SBDSP1-203ENST00000437201 LRRC4BQ9NT99 713 aa24.02■■□□□ 1.44
SBDSP1-203ENST00000437201 MAP2P11137 1827 aaKnown RBP24.01■■□□□ 1.43
SBDSP1-203ENST00000437201 ZBTB7AO95365 584 aa24.01■■□□□ 1.43
SBDSP1-203ENST00000437201 MORC1Q86VD1 984 aa24.01■■□□□ 1.43
SBDSP1-203ENST00000437201 SHANK3Q9BYB0 1731 aa24.01■■□□□ 1.43
SBDSP1-203ENST00000437201 CASZ1Q86V15 1759 aa24.01■■□□□ 1.43
SBDSP1-203ENST00000437201 NCAPD2Q15021 1401 aa24.01■■□□□ 1.43
SBDSP1-203ENST00000437201 PDGFDQ9GZP0 370 aaPredicted RBP24■■□□□ 1.43
SBDSP1-203ENST00000437201 MTFR1LQ9H019 292 aa24■■□□□ 1.43
SBDSP1-203ENST00000437201 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24■■□□□ 1.43
SBDSP1-203ENST00000437201 DOT1LQ8TEK3 1739 aa23.99■■□□□ 1.43
SBDSP1-203ENST00000437201 DCAF8L1A6NGE4 600 aa23.98■■□□□ 1.43
SBDSP1-203ENST00000437201 CYP27B1O15528 508 aa23.98■■□□□ 1.43
SBDSP1-203ENST00000437201 EIF4A2Q14240 407 aaKnown RBP23.98■■□□□ 1.43
SBDSP1-203ENST00000437201 PAPPAQ13219 1627 aa23.97■■□□□ 1.43
SBDSP1-203ENST00000437201 CCNL1Q9UK58 526 aaPredicted RBP23.97■■□□□ 1.43
SBDSP1-203ENST00000437201 ATF5Q9Y2D1 282 aaPredicted RBP23.97■■□□□ 1.43
SBDSP1-203ENST00000437201 PLEKHG2Q9H7P9 1386 aa23.96■■□□□ 1.43
SBDSP1-203ENST00000437201 KIF7Q2M1P5 1343 aa23.96■■□□□ 1.43
SBDSP1-203ENST00000437201 ZNF827Q17R98 1081 aa23.96■■□□□ 1.43
SBDSP1-203ENST00000437201 AKT1S1Q96B36 256 aa23.96■■□□□ 1.43
SBDSP1-203ENST00000437201 NKX1-1Q15270 411 aaPredicted RBP23.95■■□□□ 1.42
SBDSP1-203ENST00000437201 TFCP2L1Q9NZI6 479 aa23.95■■□□□ 1.42
SBDSP1-203ENST00000437201 PTGER2P43116 358 aa23.94■■□□□ 1.42
SBDSP1-203ENST00000437201 MPRIPQ6WCQ1 1025 aa23.94■■□□□ 1.42
SBDSP1-203ENST00000437201 SLC16A10Q8TF71 515 aa23.94■■□□□ 1.42
SBDSP1-203ENST00000437201 SMARCC1Q92922 1105 aaPredicted RBP23.93■■□□□ 1.42
SBDSP1-203ENST00000437201 IFNL2Q8IZJ0 200 aa23.92■■□□□ 1.42
SBDSP1-203ENST00000437201 PKD1L3Q7Z443 1732 aa23.92■■□□□ 1.42
SBDSP1-203ENST00000437201 KCNQ4P56696 695 aa23.91■■□□□ 1.42
SBDSP1-203ENST00000437201 LY75O60449 1722 aa23.9■■□□□ 1.42
SBDSP1-203ENST00000437201 IGSF1Q8N6C5 1336 aa23.9■■□□□ 1.42
SBDSP1-203ENST00000437201 AMER1Q5JTC6 1135 aaPredicted RBP23.89■■□□□ 1.41
SBDSP1-203ENST00000437201 PALLDQ8WX93 1383 aa23.89■■□□□ 1.41
SBDSP1-203ENST00000437201 PHKG2P15735 406 aa23.88■■□□□ 1.41
SBDSP1-203ENST00000437201 PLEKHO1Q53GL0 409 aaPredicted RBP23.87■■□□□ 1.41
SBDSP1-203ENST00000437201 SGIP1Q9BQI5 828 aa23.87■■□□□ 1.41
SBDSP1-203ENST00000437201 TMOD3Q9NYL9 352 aa23.87■■□□□ 1.41
SBDSP1-203ENST00000437201 PNPLA7Q6ZV29 1317 aa23.86■■□□□ 1.41
SBDSP1-203ENST00000437201 HSP90AB1P08238 724 aaKnown RBP23.86■■□□□ 1.41
SBDSP1-203ENST00000437201 AMOTQ4VCS5 1084 aa23.86■■□□□ 1.41
SBDSP1-203ENST00000437201 PIGBQ92521 554 aa23.86■■□□□ 1.41
SBDSP1-203ENST00000437201 ARXQ96QS3 562 aa23.86■■□□□ 1.41
SBDSP1-203ENST00000437201 POLD1P28340 1107 aa23.85■■□□□ 1.41
SBDSP1-203ENST00000437201 QSER1Q2KHR3 1735 aa23.84■■□□□ 1.41
SBDSP1-203ENST00000437201 FLAD1Q8NFF5 587 aa23.84■■□□□ 1.41
SBDSP1-203ENST00000437201 PER1O15534 1290 aaPredicted RBP23.83■■□□□ 1.41
SBDSP1-203ENST00000437201 FHDC1Q9C0D6 1143 aaPredicted RBP23.83■■□□□ 1.41
SBDSP1-203ENST00000437201 SYT17Q9BSW7 474 aa23.82■■□□□ 1.4
SBDSP1-203ENST00000437201 ERVV-2B6SEH9 535 aa23.81■■□□□ 1.4
SBDSP1-203ENST00000437201 MSH5O43196 834 aa23.81■■□□□ 1.4
SBDSP1-203ENST00000437201 DCAF5Q96JK2 942 aa23.81■■□□□ 1.4
SBDSP1-203ENST00000437201 TOGARAM1Q9Y4F4 1720 aa23.8■■□□□ 1.4
SBDSP1-203ENST00000437201 ITGB4P16144 1822 aa23.8■■□□□ 1.4
SBDSP1-203ENST00000437201 IL13P35225 146 aa23.79■■□□□ 1.4
SBDSP1-203ENST00000437201 MTHFSP49914 203 aa23.79■■□□□ 1.4
SBDSP1-203ENST00000437201 SULT6B1Q6IMI4 303 aa23.79■■□□□ 1.4
SBDSP1-203ENST00000437201 ZNF530Q6P9A1 599 aaPredicted RBP23.79■■□□□ 1.4
SBDSP1-203ENST00000437201 MAP3K5Q99683 1374 aa23.78■■□□□ 1.4
SBDSP1-203ENST00000437201 LOC102724428A0A0B4J2F2 783 aa23.78■■□□□ 1.4
SBDSP1-203ENST00000437201 SIK1P57059 783 aa23.78■■□□□ 1.4
SBDSP1-203ENST00000437201 C1orf141Q5JVX7 400 aa23.78■■□□□ 1.4
SBDSP1-203ENST00000437201 CC2D1BQ5T0F9 858 aaKnown RBP23.78■■□□□ 1.4
SBDSP1-203ENST00000437201 AK7Q96M32 723 aa23.78■■□□□ 1.4
SBDSP1-203ENST00000437201 NPC1L1Q9UHC9 1359 aa23.78■■□□□ 1.4
SBDSP1-203ENST00000437201 COL23A1Q86Y22 540 aaPredicted RBP23.77■■□□□ 1.4
SBDSP1-203ENST00000437201 AEBP1Q8IUX7 1158 aa23.76■■□□□ 1.39
SBDSP1-203ENST00000437201 ASAP1Q9ULH1 1129 aa23.76■■□□□ 1.39
SBDSP1-203ENST00000437201 C5P01031 1676 aa23.76■■□□□ 1.39
SBDSP1-203ENST00000437201 KDRP35968 1356 aa23.76■■□□□ 1.39
SBDSP1-203ENST00000437201 CABP4P57796 275 aa23.74■■□□□ 1.39
SBDSP1-203ENST00000437201 YY1P25490 414 aa23.73■■□□□ 1.39
SBDSP1-203ENST00000437201 ATP6V1AP38606 617 aa23.73■■□□□ 1.39
SBDSP1-203ENST00000437201 ATG3Q9NT62 314 aa23.73■■□□□ 1.39
SBDSP1-203ENST00000437201 TUBGCP6Q96RT7 1819 aa23.73■■□□□ 1.39
SBDSP1-203ENST00000437201 DIAPH1O60610 1272 aaKnown RBP23.72■■□□□ 1.39
SBDSP1-203ENST00000437201 C4BP0C0L5 1744 aa23.7■■□□□ 1.39
SBDSP1-203ENST00000437201 KLHL34Q8N239 644 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms