RNA–Protein interactions for RNA: ENST00000437028.5

SNHG11-208, Transcript of small nucleolar RNA host gene 11, humanhuman

TSL 3

Gene SNHG11, Length 1,169 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG11-208ENST00000437028 KIF24Q5T7B8 1368 aa21.46■■□□□ 1.03
SNHG11-208ENST00000437028 RGPD2P0DJD1 1756 aa21.46■■□□□ 1.03
SNHG11-208ENST00000437028 RAPGEF4Q8WZA2 1011 aa21.45■■□□□ 1.02
SNHG11-208ENST00000437028 DOT1LQ8TEK3 1739 aa21.45■■□□□ 1.02
SNHG11-208ENST00000437028 MEGF6O75095 1541 aa21.45■■□□□ 1.02
SNHG11-208ENST00000437028 PRIM1P49642 420 aaKnown RBP21.43■■□□□ 1.02
SNHG11-208ENST00000437028 LRRC4BQ9NT99 713 aa21.43■■□□□ 1.02
SNHG11-208ENST00000437028 INSRP06213 1382 aa21.43■■□□□ 1.02
SNHG11-208ENST00000437028 FLT4P35916 1363 aa21.43■■□□□ 1.02
SNHG11-208ENST00000437028 SHANK3Q9BYB0 1731 aa21.43■■□□□ 1.02
SNHG11-208ENST00000437028 NBPF6Q5VWK0 638 aa21.42■■□□□ 1.02
SNHG11-208ENST00000437028 NBPF4Q96M43 638 aa21.42■■□□□ 1.02
SNHG11-208ENST00000437028 QSER1Q2KHR3 1735 aa21.41■■□□□ 1.02
SNHG11-208ENST00000437028 TATP17735 454 aaPredicted RBP21.41■■□□□ 1.02
SNHG11-208ENST00000437028 ZNF827Q17R98 1081 aa21.41■■□□□ 1.02
SNHG11-208ENST00000437028 SLC16A10Q8TF71 515 aa21.41■■□□□ 1.02
SNHG11-208ENST00000437028 AKT1S1Q96B36 256 aa21.4■■□□□ 1.02
SNHG11-208ENST00000437028 ARXQ96QS3 562 aa21.4■■□□□ 1.02
SNHG11-208ENST00000437028 SGIP1Q9BQI5 828 aa21.4■■□□□ 1.02
SNHG11-208ENST00000437028 FHDC1Q9C0D6 1143 aaPredicted RBP21.4■■□□□ 1.02
SNHG11-208ENST00000437028 LY75O60449 1722 aa21.39■■□□□ 1.01
SNHG11-208ENST00000437028 HMGB2P26583 209 aaKnown RBP21.39■■□□□ 1.01
SNHG11-208ENST00000437028 SYT17Q9BSW7 474 aa21.39■■□□□ 1.01
SNHG11-208ENST00000437028 NSD3Q9BZ95 1437 aa21.38■■□□□ 1.01
SNHG11-208ENST00000437028 PCDH11XQ9BZA7 1347 aa21.38■■□□□ 1.01
SNHG11-208ENST00000437028 PCDH11YQ9BZA8 1340 aa21.38■■□□□ 1.01
SNHG11-208ENST00000437028 HSP90AB2PQ58FF8 381 aa21.38■■□□□ 1.01
SNHG11-208ENST00000437028 USHBP1Q8N6Y0 703 aa21.38■■□□□ 1.01
SNHG11-208ENST00000437028 NSD2O96028 1365 aa21.37■■□□□ 1.01
SNHG11-208ENST00000437028 TFCP2L1Q9NZI6 479 aa21.37■■□□□ 1.01
SNHG11-208ENST00000437028 MAP3K5Q99683 1374 aa21.36■■□□□ 1.01
SNHG11-208ENST00000437028 POLD1P28340 1107 aa21.36■■□□□ 1.01
SNHG11-208ENST00000437028 CARD14Q9BXL6 1004 aa21.36■■□□□ 1.01
SNHG11-208ENST00000437028 CCNL1Q9UK58 526 aaPredicted RBP21.35■■□□□ 1.01
SNHG11-208ENST00000437028 PNPLA7Q6ZV29 1317 aa21.33■■□□□ 1.01
SNHG11-208ENST00000437028 PPM1GO15355 546 aaPredicted RBP21.31■■□□□ 1
SNHG11-208ENST00000437028 EMILIN1Q9Y6C2 1016 aa21.31■■□□□ 1
SNHG11-208ENST00000437028 ANKRD26Q9UPS8 1709 aa21.31■■□□□ 1
SNHG11-208ENST00000437028 TUBGCP6Q96RT7 1819 aa21.3■■□□□ 1
SNHG11-208ENST00000437028 KCNQ4P56696 695 aa21.3■■□□□ 1
SNHG11-208ENST00000437028 COL24A1Q17RW2 1714 aa21.29■■□□□ 1
SNHG11-208ENST00000437028 PKD1L3Q7Z443 1732 aa21.29■■□□□ 1
SNHG11-208ENST00000437028 POLR3GLQ9BT43 218 aa21.28■■□□□ 1
SNHG11-208ENST00000437028 SPG7Q9UQ90 795 aa21.28■■□□□ 1
SNHG11-208ENST00000437028 WASHC2AQ641Q2 1341 aa21.28■■□□□ 1
SNHG11-208ENST00000437028 MSH5O43196 834 aa21.27■■□□□ 1
SNHG11-208ENST00000437028 NCAPD2Q15021 1401 aa21.27■■□□□ 1
SNHG11-208ENST00000437028 C5P01031 1676 aa21.27■■□□□ 1
SNHG11-208ENST00000437028 MAP2P11137 1827 aaKnown RBP21.27■□□□□ 0.99
SNHG11-208ENST00000437028 PALLDQ8WX93 1383 aa21.26■□□□□ 0.99
SNHG11-208ENST00000437028 MPRIPQ6WCQ1 1025 aa21.26■□□□□ 0.99
SNHG11-208ENST00000437028 KLHL34Q8N239 644 aa21.26■□□□□ 0.99
SNHG11-208ENST00000437028 SMARCC1Q92922 1105 aaPredicted RBP21.26■□□□□ 0.99
SNHG11-208ENST00000437028 CYP27B1O15528 508 aa21.25■□□□□ 0.99
SNHG11-208ENST00000437028 EIF4G2P78344 907 aaKnown RBP eCLIP21.25■□□□□ 0.99
SNHG11-208ENST00000437028 FLAD1Q8NFF5 587 aa21.25■□□□□ 0.99
SNHG11-208ENST00000437028 CHD4Q14839 1912 aa21.25■□□□□ 0.99
SNHG11-208ENST00000437028 GPR162Q16538 588 aa21.24■□□□□ 0.99
SNHG11-208ENST00000437028 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.24■□□□□ 0.99
SNHG11-208ENST00000437028 ITGB4P16144 1822 aa21.22■□□□□ 0.99
SNHG11-208ENST00000437028 TOGARAM1Q9Y4F4 1720 aa21.22■□□□□ 0.99
SNHG11-208ENST00000437028 NKX1-1Q15270 411 aaPredicted RBP21.22■□□□□ 0.99
SNHG11-208ENST00000437028 POLKQ9UBT6 870 aa21.22■□□□□ 0.99
SNHG11-208ENST00000437028 UTRNP46939 3433 aa21.22■□□□□ 0.99
SNHG11-208ENST00000437028 COL23A1Q86Y22 540 aaPredicted RBP21.21■□□□□ 0.99
SNHG11-208ENST00000437028 EYA1Q99502 592 aa21.21■□□□□ 0.99
SNHG11-208ENST00000437028 PLEKHG2Q9H7P9 1386 aa21.21■□□□□ 0.99
SNHG11-208ENST00000437028 TAF1LQ8IZX4 1826 aa21.2■□□□□ 0.98
SNHG11-208ENST00000437028 ZNF784Q8NCA9 323 aaPredicted RBP21.19■□□□□ 0.98
SNHG11-208ENST00000437028 IFNL2Q8IZJ0 200 aa21.18■□□□□ 0.98
SNHG11-208ENST00000437028 PIGBQ92521 554 aa21.18■□□□□ 0.98
SNHG11-208ENST00000437028 AK7Q96M32 723 aa21.18■□□□□ 0.98
SNHG11-208ENST00000437028 TMOD3Q9NYL9 352 aa21.18■□□□□ 0.98
SNHG11-208ENST00000437028 C4BP0C0L5 1744 aa21.18■□□□□ 0.98
SNHG11-208ENST00000437028 HSPA5P11021 654 aaKnown RBP21.17■□□□□ 0.98
SNHG11-208ENST00000437028 TNNT2P45379 298 aaPredicted RBP21.17■□□□□ 0.98
SNHG11-208ENST00000437028 PELP1Q8IZL8 1130 aaKnown RBP21.17■□□□□ 0.98
SNHG11-208ENST00000437028 EIF4A2Q14240 407 aaKnown RBP21.16■□□□□ 0.98
SNHG11-208ENST00000437028 PHKG2P15735 406 aa21.15■□□□□ 0.98
SNHG11-208ENST00000437028 PANK3Q9H999 370 aa21.15■□□□□ 0.98
SNHG11-208ENST00000437028 MSL1Q68DK7 614 aa21.14■□□□□ 0.97
SNHG11-208ENST00000437028 LOC102724428A0A0B4J2F2 783 aa21.13■□□□□ 0.97
SNHG11-208ENST00000437028 GRIN3BO60391 1043 aa21.13■□□□□ 0.97
SNHG11-208ENST00000437028 SIK1P57059 783 aa21.13■□□□□ 0.97
SNHG11-208ENST00000437028 NLGN2Q8NFZ4 835 aa21.13■□□□□ 0.97
SNHG11-208ENST00000437028 IGSF1Q8N6C5 1336 aa21.11■□□□□ 0.97
SNHG11-208ENST00000437028 HSP90AB1P08238 724 aaKnown RBP21.11■□□□□ 0.97
SNHG11-208ENST00000437028 SSFA2P28290 1259 aa21.11■□□□□ 0.97
SNHG11-208ENST00000437028 CD2APQ9Y5K6 639 aa21.11■□□□□ 0.97
SNHG11-208ENST00000437028 UBR3Q6ZT12 1888 aa21.1■□□□□ 0.97
SNHG11-208ENST00000437028 MORC1Q86VD1 984 aa21.1■□□□□ 0.97
SNHG11-208ENST00000437028 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.09■□□□□ 0.97
SNHG11-208ENST00000437028 PHF14O94880 888 aa21.09■□□□□ 0.97
SNHG11-208ENST00000437028 PLEKHO1Q53GL0 409 aaPredicted RBP21.09■□□□□ 0.97
SNHG11-208ENST00000437028 ERVV-2B6SEH9 535 aa21.08■□□□□ 0.97
SNHG11-208ENST00000437028 ATP6V1AP38606 617 aa21.08■□□□□ 0.97
SNHG11-208ENST00000437028 AMOTQ4VCS5 1084 aa21.08■□□□□ 0.97
SNHG11-208ENST00000437028 ASAP1Q9ULH1 1129 aa21.08■□□□□ 0.97
SNHG11-208ENST00000437028 KNSTRNQ9Y448 316 aa21.08■□□□□ 0.97
SNHG11-208ENST00000437028 ZEB1P37275 1124 aaPredicted RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 250 ms