RNA–Protein interactions for RNA: ENST00000436976.1

HMGN1P19-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 19, humanhuman

BASIC

Gene HMGN1P19, Length 333 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P19-201ENST00000436976 MSH5O43196 834 aa23.72■■□□□ 1.39
HMGN1P19-201ENST00000436976 DDX54Q8TDD1 881 aaKnown RBP23.72■■□□□ 1.39
HMGN1P19-201ENST00000436976 ANKRD24Q8TF21 1146 aa23.72■■□□□ 1.39
HMGN1P19-201ENST00000436976 ANKRD36BQ8N2N9 1353 aa23.72■■□□□ 1.39
HMGN1P19-201ENST00000436976 PRIM1P49642 420 aaKnown RBP23.71■■□□□ 1.39
HMGN1P19-201ENST00000436976 SYTL4Q96C24 671 aaPredicted RBP23.71■■□□□ 1.39
HMGN1P19-201ENST00000436976 EVC2Q86UK5 1308 aa23.7■■□□□ 1.38
HMGN1P19-201ENST00000436976 APLP1P51693 650 aa23.7■■□□□ 1.38
HMGN1P19-201ENST00000436976 USP31Q70CQ4 1352 aa23.69■■□□□ 1.38
HMGN1P19-201ENST00000436976 KTN1Q86UP2 1357 aaKnown RBP23.69■■□□□ 1.38
HMGN1P19-201ENST00000436976 CCNL1Q9UK58 526 aaPredicted RBP23.69■■□□□ 1.38
HMGN1P19-201ENST00000436976 TOGARAM1Q9Y4F4 1720 aa23.68■■□□□ 1.38
HMGN1P19-201ENST00000436976 CICQ96RK0 1608 aaPredicted RBP23.66■■□□□ 1.38
HMGN1P19-201ENST00000436976 WWC3Q9ULE0 1092 aa23.66■■□□□ 1.38
HMGN1P19-201ENST00000436976 UBR3Q6ZT12 1888 aa23.66■■□□□ 1.38
HMGN1P19-201ENST00000436976 IGSF1Q8N6C5 1336 aa23.64■■□□□ 1.38
HMGN1P19-201ENST00000436976 COL13A1Q5TAT6 717 aaPredicted RBP23.64■■□□□ 1.37
HMGN1P19-201ENST00000436976 NME9Q86XW9 330 aa23.64■■□□□ 1.37
HMGN1P19-201ENST00000436976 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.64■■□□□ 1.37
HMGN1P19-201ENST00000436976 CD163L1Q9NR16 1453 aa23.62■■□□□ 1.37
HMGN1P19-201ENST00000436976 KIAA1551Q9HCM1 1747 aa23.61■■□□□ 1.37
HMGN1P19-201ENST00000436976 C4BP0C0L5 1744 aa23.6■■□□□ 1.37
HMGN1P19-201ENST00000436976 CAPN15O75808 1086 aa23.6■■□□□ 1.37
HMGN1P19-201ENST00000436976 SBNO2Q9Y2G9 1366 aa23.6■■□□□ 1.37
HMGN1P19-201ENST00000436976 N4BP2Q86UW6 1770 aaPredicted RBP23.58■■□□□ 1.37
HMGN1P19-201ENST00000436976 USP47Q96K76 1375 aa23.58■■□□□ 1.37
HMGN1P19-201ENST00000436976 TOMM70O94826 608 aa23.58■■□□□ 1.37
HMGN1P19-201ENST00000436976 KIF13BQ9NQT8 1826 aa23.58■■□□□ 1.37
HMGN1P19-201ENST00000436976 MEGF6O75095 1541 aa23.58■■□□□ 1.36
HMGN1P19-201ENST00000436976 ITGB4P16144 1822 aa23.57■■□□□ 1.36
HMGN1P19-201ENST00000436976 AMIGO3Q86WK7 504 aa23.57■■□□□ 1.36
HMGN1P19-201ENST00000436976 LTV1Q96GA3 475 aaPredicted RBP23.56■■□□□ 1.36
HMGN1P19-201ENST00000436976 IP6K1Q92551 441 aa23.55■■□□□ 1.36
HMGN1P19-201ENST00000436976 HTRA3P83110 453 aa23.54■■□□□ 1.36
HMGN1P19-201ENST00000436976 ZCRB1Q8TBF4 217 aaKnown RBP23.54■■□□□ 1.36
HMGN1P19-201ENST00000436976 FLAD1Q8NFF5 587 aa23.53■■□□□ 1.36
HMGN1P19-201ENST00000436976 BRCA1P38398 1863 aaKnown RBP23.52■■□□□ 1.36
HMGN1P19-201ENST00000436976 JMYQ8N9B5 988 aa23.52■■□□□ 1.36
HMGN1P19-201ENST00000436976 KLRG1Q96E93 195 aa23.52■■□□□ 1.36
HMGN1P19-201ENST00000436976 SMIM5Q71RC9 77 aa23.51■■□□□ 1.35
HMGN1P19-201ENST00000436976 NMRK2Q9NPI5 230 aa23.51■■□□□ 1.35
HMGN1P19-201ENST00000436976 MAP2P11137 1827 aaKnown RBP23.51■■□□□ 1.35
HMGN1P19-201ENST00000436976 PRELPP51888 382 aa23.5■■□□□ 1.35
HMGN1P19-201ENST00000436976 TNS4Q8IZW8 715 aa23.48■■□□□ 1.35
HMGN1P19-201ENST00000436976 PALLDQ8WX93 1383 aa23.48■■□□□ 1.35
HMGN1P19-201ENST00000436976 EDC4Q6P2E9 1401 aaKnown RBP23.47■■□□□ 1.35
HMGN1P19-201ENST00000436976 PKD1L3Q7Z443 1732 aa23.47■■□□□ 1.35
HMGN1P19-201ENST00000436976 PXDNLA1KZ92 1463 aa23.46■■□□□ 1.35
HMGN1P19-201ENST00000436976 PHF14O94880 888 aa23.44■■□□□ 1.34
HMGN1P19-201ENST00000436976 RBM46Q8TBY0 533 aaKnown RBP23.44■■□□□ 1.34
HMGN1P19-201ENST00000436976 ARFGEF1Q9Y6D6 1849 aa23.44■■□□□ 1.34
HMGN1P19-201ENST00000436976 HOXC9P31274 260 aa23.43■■□□□ 1.34
HMGN1P19-201ENST00000436976 MAP3K19Q56UN5 1328 aa23.42■■□□□ 1.34
HMGN1P19-201ENST00000436976 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.42■■□□□ 1.34
HMGN1P19-201ENST00000436976 AK7Q96M32 723 aa23.42■■□□□ 1.34
HMGN1P19-201ENST00000436976 A0A1W2PP64 1363 aa23.41■■□□□ 1.34
HMGN1P19-201ENST00000436976 FBLN1P23142 703 aa23.41■■□□□ 1.34
HMGN1P19-201ENST00000436976 SLC12A5Q9H2X9 1139 aa23.41■■□□□ 1.34
HMGN1P19-201ENST00000436976 ROCK2O75116 1388 aaKnown RBP23.4■■□□□ 1.34
HMGN1P19-201ENST00000436976 L3MBTL2Q969R5 705 aa23.4■■□□□ 1.34
HMGN1P19-201ENST00000436976 SBF1O95248 1867 aa23.4■■□□□ 1.34
HMGN1P19-201ENST00000436976 HDGFL2Q7Z4V5 671 aaPredicted RBP23.39■■□□□ 1.33
HMGN1P19-201ENST00000436976 TMC1Q8TDI8 760 aa23.39■■□□□ 1.33
HMGN1P19-201ENST00000436976 NBPF6Q5VWK0 638 aa23.38■■□□□ 1.33
HMGN1P19-201ENST00000436976 MPRIPQ6WCQ1 1025 aa23.38■■□□□ 1.33
HMGN1P19-201ENST00000436976 USHBP1Q8N6Y0 703 aa23.38■■□□□ 1.33
HMGN1P19-201ENST00000436976 NBPF4Q96M43 638 aa23.38■■□□□ 1.33
HMGN1P19-201ENST00000436976 NSD3Q9BZ95 1437 aa23.38■■□□□ 1.33
HMGN1P19-201ENST00000436976 HMGB2P26583 209 aaKnown RBP23.37■■□□□ 1.33
HMGN1P19-201ENST00000436976 BCS1LQ9Y276 419 aa23.37■■□□□ 1.33
HMGN1P19-201ENST00000436976 TNRC6CQ9HCJ0 1690 aaKnown RBP23.37■■□□□ 1.33
HMGN1P19-201ENST00000436976 SSFA2P28290 1259 aa23.36■■□□□ 1.33
HMGN1P19-201ENST00000436976 CGNL1Q0VF96 1302 aa23.35■■□□□ 1.33
HMGN1P19-201ENST00000436976 KCPQ6ZWJ8 1503 aa23.35■■□□□ 1.33
HMGN1P19-201ENST00000436976 FSTL1Q12841 308 aa23.35■■□□□ 1.33
HMGN1P19-201ENST00000436976 AMPHP49418 695 aa23.34■■□□□ 1.33
HMGN1P19-201ENST00000436976 ARHGAP27Q6ZUM4 889 aa23.34■■□□□ 1.33
HMGN1P19-201ENST00000436976 LINC00116Q8NCU8 138 aa23.34■■□□□ 1.33
HMGN1P19-201ENST00000436976 C10orf71Q711Q0 1435 aa23.33■■□□□ 1.33
HMGN1P19-201ENST00000436976 A0A0G2JLW4 131 aa23.33■■□□□ 1.33
HMGN1P19-201ENST00000436976 MMP10P09238 476 aa23.33■■□□□ 1.33
HMGN1P19-201ENST00000436976 PCDH11XQ9BZA7 1347 aa23.33■■□□□ 1.32
HMGN1P19-201ENST00000436976 PCDH11YQ9BZA8 1340 aa23.33■■□□□ 1.32
HMGN1P19-201ENST00000436976 C16orf71Q8IYS4 520 aaPredicted RBP23.32■■□□□ 1.32
HMGN1P19-201ENST00000436976 C4AP0C0L4 1744 aa23.31■■□□□ 1.32
HMGN1P19-201ENST00000436976 CYP27B1O15528 508 aa23.31■■□□□ 1.32
HMGN1P19-201ENST00000436976 TGFB2P61812 414 aa23.31■■□□□ 1.32
HMGN1P19-201ENST00000436976 RAPGEF4Q8WZA2 1011 aa23.31■■□□□ 1.32
HMGN1P19-201ENST00000436976 SMARCC1Q92922 1105 aaPredicted RBP23.31■■□□□ 1.32
HMGN1P19-201ENST00000436976 PLEKHG2Q9H7P9 1386 aa23.3■■□□□ 1.32
HMGN1P19-201ENST00000436976 C9orf131Q5VYM1 1079 aa23.3■■□□□ 1.32
HMGN1P19-201ENST00000436976 TERF2IPQ9NYB0 399 aa23.3■■□□□ 1.32
HMGN1P19-201ENST00000436976 RTL1A6NKG5 1358 aa23.29■■□□□ 1.32
HMGN1P19-201ENST00000436976 TATP17735 454 aaPredicted RBP23.29■■□□□ 1.32
HMGN1P19-201ENST00000436976 PIGBQ92521 554 aa23.29■■□□□ 1.32
HMGN1P19-201ENST00000436976 COG3Q96JB2 828 aa23.28■■□□□ 1.32
HMGN1P19-201ENST00000436976 LOC102724428A0A0B4J2F2 783 aa23.27■■□□□ 1.32
HMGN1P19-201ENST00000436976 GNPATO15228 680 aa23.27■■□□□ 1.32
HMGN1P19-201ENST00000436976 FCHSD2O94868 740 aa23.27■■□□□ 1.32
HMGN1P19-201ENST00000436976 HSPA1AP0DMV8 641 aaKnown RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms