RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 CARD11Q9BXL7 1154 aa21.05■□□□□ 0.96
HDAC8-213ENST00000436675 A0A1W2PP64 1363 aa21.04■□□□□ 0.96
HDAC8-213ENST00000436675 FAM208AQ9UK61 1670 aaKnown RBP21.03■□□□□ 0.96
HDAC8-213ENST00000436675 FBLN1P23142 703 aa21.03■□□□□ 0.96
HDAC8-213ENST00000436675 TERF2IPQ9NYB0 399 aa21.03■□□□□ 0.96
HDAC8-213ENST00000436675 LY75O60449 1722 aa21.02■□□□□ 0.96
HDAC8-213ENST00000436675 CEP350Q5VT06 3117 aa21.02■□□□□ 0.96
HDAC8-213ENST00000436675 SHANK3Q9BYB0 1731 aa21.01■□□□□ 0.95
HDAC8-213ENST00000436675 ANKRD36BQ8N2N9 1353 aa21.01■□□□□ 0.95
HDAC8-213ENST00000436675 CCNL1Q9UK58 526 aaPredicted RBP21.01■□□□□ 0.95
HDAC8-213ENST00000436675 NSD2O96028 1365 aa21■□□□□ 0.95
HDAC8-213ENST00000436675 YBX3P16989 372 aaKnown RBP eCLIP21■□□□□ 0.95
HDAC8-213ENST00000436675 MSL1Q68DK7 614 aa21■□□□□ 0.95
HDAC8-213ENST00000436675 AMPHP49418 695 aa20.99■□□□□ 0.95
HDAC8-213ENST00000436675 ZCRB1Q8TBF4 217 aaKnown RBP20.99■□□□□ 0.95
HDAC8-213ENST00000436675 MAP3K19Q56UN5 1328 aa20.99■□□□□ 0.95
HDAC8-213ENST00000436675 HOXC9P31274 260 aa20.98■□□□□ 0.95
HDAC8-213ENST00000436675 COL23A1Q86Y22 540 aaPredicted RBP20.98■□□□□ 0.95
HDAC8-213ENST00000436675 COG3Q96JB2 828 aa20.97■□□□□ 0.95
HDAC8-213ENST00000436675 MEGF6O75095 1541 aa20.97■□□□□ 0.95
HDAC8-213ENST00000436675 GRIN3BO60391 1043 aa20.95■□□□□ 0.94
HDAC8-213ENST00000436675 USHBP1Q8N6Y0 703 aa20.95■□□□□ 0.94
HDAC8-213ENST00000436675 USP47Q96K76 1375 aa20.94■□□□□ 0.94
HDAC8-213ENST00000436675 NBPF6Q5VWK0 638 aa20.92■□□□□ 0.94
HDAC8-213ENST00000436675 NBPF4Q96M43 638 aa20.92■□□□□ 0.94
HDAC8-213ENST00000436675 RRS1Q15050 365 aaKnown RBP20.91■□□□□ 0.94
HDAC8-213ENST00000436675 C5P01031 1676 aa20.9■□□□□ 0.94
HDAC8-213ENST00000436675 ATP10DQ9P241 1426 aa20.9■□□□□ 0.94
HDAC8-213ENST00000436675 IFFO2Q5TF58 517 aa20.9■□□□□ 0.94
HDAC8-213ENST00000436675 TAF1LQ8IZX4 1826 aa20.88■□□□□ 0.93
HDAC8-213ENST00000436675 ZNF526Q8TF50 670 aaPredicted RBP20.88■□□□□ 0.93
HDAC8-213ENST00000436675 RAPGEF4Q8WZA2 1011 aa20.88■□□□□ 0.93
HDAC8-213ENST00000436675 PUS7Q96PZ0 661 aaKnown RBP20.88■□□□□ 0.93
HDAC8-213ENST00000436675 WWC3Q9ULE0 1092 aa20.88■□□□□ 0.93
HDAC8-213ENST00000436675 ST20-MTHFSA0A0A6YYL1 179 aa20.86■□□□□ 0.93
HDAC8-213ENST00000436675 TATP17735 454 aaPredicted RBP20.86■□□□□ 0.93
HDAC8-213ENST00000436675 MPRIPQ6WCQ1 1025 aa20.86■□□□□ 0.93
HDAC8-213ENST00000436675 GGNBP2Q9H3C7 697 aa20.86■□□□□ 0.93
HDAC8-213ENST00000436675 SMIM5Q71RC9 77 aa20.85■□□□□ 0.93
HDAC8-213ENST00000436675 TESK2Q96S53 571 aa20.85■□□□□ 0.93
HDAC8-213ENST00000436675 GPBP1L1Q9HC44 474 aaPredicted RBP20.85■□□□□ 0.93
HDAC8-213ENST00000436675 CD2APQ9Y5K6 639 aa20.84■□□□□ 0.93
HDAC8-213ENST00000436675 RTL1A6NKG5 1358 aa20.84■□□□□ 0.93
HDAC8-213ENST00000436675 PALLDQ8WX93 1383 aa20.84■□□□□ 0.93
HDAC8-213ENST00000436675 TONSLQ96HA7 1378 aa20.84■□□□□ 0.93
HDAC8-213ENST00000436675 SMG6Q86US8 1419 aaKnown RBP20.83■□□□□ 0.93
HDAC8-213ENST00000436675 ITGB4P16144 1822 aa20.83■□□□□ 0.92
HDAC8-213ENST00000436675 CGNL1Q0VF96 1302 aa20.82■□□□□ 0.92
HDAC8-213ENST00000436675 PHF14O94880 888 aa20.82■□□□□ 0.92
HDAC8-213ENST00000436675 HSP90AB2PQ58FF8 381 aa20.82■□□□□ 0.92
HDAC8-213ENST00000436675 FYB1O15117 783 aa20.81■□□□□ 0.92
HDAC8-213ENST00000436675 AMIGO3Q86WK7 504 aa20.81■□□□□ 0.92
HDAC8-213ENST00000436675 FLAD1Q8NFF5 587 aa20.81■□□□□ 0.92
HDAC8-213ENST00000436675 C4BP0C0L5 1744 aa20.81■□□□□ 0.92
HDAC8-213ENST00000436675 PCDH11XQ9BZA7 1347 aa20.8■□□□□ 0.92
HDAC8-213ENST00000436675 PCDH11YQ9BZA8 1340 aa20.8■□□□□ 0.92
HDAC8-213ENST00000436675 AK7Q96M32 723 aa20.8■□□□□ 0.92
HDAC8-213ENST00000436675 TOGARAM1Q9Y4F4 1720 aa20.8■□□□□ 0.92
HDAC8-213ENST00000436675 CYP27B1O15528 508 aa20.79■□□□□ 0.92
HDAC8-213ENST00000436675 IGSF1Q8N6C5 1336 aa20.78■□□□□ 0.92
HDAC8-213ENST00000436675 UBR3Q6ZT12 1888 aa20.78■□□□□ 0.92
HDAC8-213ENST00000436675 KIF20BQ96Q89 1820 aa20.76■□□□□ 0.91
HDAC8-213ENST00000436675 ADCY9O60503 1353 aa20.76■□□□□ 0.91
HDAC8-213ENST00000436675 HSPA6P17066 643 aa20.76■□□□□ 0.91
HDAC8-213ENST00000436675 INSRP06213 1382 aa20.75■□□□□ 0.91
HDAC8-213ENST00000436675 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.75■□□□□ 0.91
HDAC8-213ENST00000436675 SMARCC1Q92922 1105 aaPredicted RBP20.75■□□□□ 0.91
HDAC8-213ENST00000436675 PIGBQ92521 554 aa20.74■□□□□ 0.91
HDAC8-213ENST00000436675 FLT4P35916 1363 aa20.73■□□□□ 0.91
HDAC8-213ENST00000436675 HMGB2P26583 209 aaKnown RBP20.73■□□□□ 0.91
HDAC8-213ENST00000436675 LINC00116Q8NCU8 138 aa20.72■□□□□ 0.91
HDAC8-213ENST00000436675 EMILIN1Q9Y6C2 1016 aa20.72■□□□□ 0.91
HDAC8-213ENST00000436675 PKD1L3Q7Z443 1732 aa20.72■□□□□ 0.91
HDAC8-213ENST00000436675 PPM1GO15355 546 aaPredicted RBP20.71■□□□□ 0.91
HDAC8-213ENST00000436675 MAP2P11137 1827 aaKnown RBP20.71■□□□□ 0.91
HDAC8-213ENST00000436675 SLC24A1O60721 1099 aa20.7■□□□□ 0.9
HDAC8-213ENST00000436675 TMF1P82094 1093 aa20.7■□□□□ 0.9
HDAC8-213ENST00000436675 LOC102724428A0A0B4J2F2 783 aa20.69■□□□□ 0.9
HDAC8-213ENST00000436675 GNPATO15228 680 aa20.69■□□□□ 0.9
HDAC8-213ENST00000436675 SIK1P57059 783 aa20.69■□□□□ 0.9
HDAC8-213ENST00000436675 SSFA2P28290 1259 aa20.68■□□□□ 0.9
HDAC8-213ENST00000436675 ASAP1Q9ULH1 1129 aa20.68■□□□□ 0.9
HDAC8-213ENST00000436675 NSD3Q9BZ95 1437 aa20.68■□□□□ 0.9
HDAC8-213ENST00000436675 KIF3CO14782 793 aa20.67■□□□□ 0.9
HDAC8-213ENST00000436675 ITPK1Q13572 414 aa20.67■□□□□ 0.9
HDAC8-213ENST00000436675 TMOD3Q9NYL9 352 aa20.67■□□□□ 0.9
HDAC8-213ENST00000436675 SPG7Q9UQ90 795 aa20.67■□□□□ 0.9
HDAC8-213ENST00000436675 N4BP2Q86UW6 1770 aaPredicted RBP20.67■□□□□ 0.9
HDAC8-213ENST00000436675 ATP6V1AP38606 617 aa20.66■□□□□ 0.9
HDAC8-213ENST00000436675 KIF24Q5T7B8 1368 aa20.65■□□□□ 0.9
HDAC8-213ENST00000436675 MMP10P09238 476 aa20.65■□□□□ 0.9
HDAC8-213ENST00000436675 NKX1-1Q15270 411 aaPredicted RBP20.65■□□□□ 0.9
HDAC8-213ENST00000436675 CARD14Q9BXL6 1004 aa20.64■□□□□ 0.89
HDAC8-213ENST00000436675 EYA1Q99502 592 aa20.62■□□□□ 0.89
HDAC8-213ENST00000436675 BCS1LQ9Y276 419 aa20.62■□□□□ 0.89
HDAC8-213ENST00000436675 A0A0G2JLW4 131 aa20.61■□□□□ 0.89
HDAC8-213ENST00000436675 ATG3Q9NT62 314 aa20.61■□□□□ 0.89
HDAC8-213ENST00000436675 PXDNLA1KZ92 1463 aa20.61■□□□□ 0.89
HDAC8-213ENST00000436675 KIAA1551Q9HCM1 1747 aa20.61■□□□□ 0.89
HDAC8-213ENST00000436675 NCAPD2Q15021 1401 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms