RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 BMP2KQ9NSY1 1161 aaPredicted RBP9.46□□□□□ -0.9
LSM3P3-201ENST00000436601 POLKQ9UBT6 870 aa9.46□□□□□ -0.9
LSM3P3-201ENST00000436601 AATKQ6ZMQ8 1374 aa9.46□□□□□ -0.9
LSM3P3-201ENST00000436601 FOXK1P85037 733 aa9.45□□□□□ -0.9
LSM3P3-201ENST00000436601 TMC2Q8TDI7 906 aa9.45□□□□□ -0.9
LSM3P3-201ENST00000436601 EMILIN3Q9NT22 766 aa9.45□□□□□ -0.9
LSM3P3-201ENST00000436601 TRIM35Q9UPQ4 493 aa9.45□□□□□ -0.9
LSM3P3-201ENST00000436601 SPATA31A3Q5VYP0 1347 aa9.45□□□□□ -0.9
LSM3P3-201ENST00000436601 UBAP1LF5GYI3 381 aa9.44□□□□□ -0.9
LSM3P3-201ENST00000436601 CLCN6P51797 869 aa9.44□□□□□ -0.9
LSM3P3-201ENST00000436601 DSG2Q14126 1118 aa9.44□□□□□ -0.9
LSM3P3-201ENST00000436601 MICALL2Q8IY33 904 aa9.44□□□□□ -0.9
LSM3P3-201ENST00000436601 IQSEC2Q5JU85 1478 aa9.44□□□□□ -0.9
LSM3P3-201ENST00000436601 PIK3C2AO00443 1686 aa9.43□□□□□ -0.9
LSM3P3-201ENST00000436601 PNPLA6Q8IY17 1366 aa9.43□□□□□ -0.9
LSM3P3-201ENST00000436601 USP19O94966 1318 aa9.43□□□□□ -0.9
LSM3P3-201ENST00000436601 RRS1Q15050 365 aaKnown RBP9.43□□□□□ -0.9
LSM3P3-201ENST00000436601 EMILIN1Q9Y6C2 1016 aa9.43□□□□□ -0.9
LSM3P3-201ENST00000436601 TRPM3Q9HCF6 1732 aaPredicted RBP9.42□□□□□ -0.9
LSM3P3-201ENST00000436601 TNS3Q68CZ2 1445 aa9.42□□□□□ -0.9
LSM3P3-201ENST00000436601 SMG6Q86US8 1419 aaKnown RBP9.42□□□□□ -0.9
LSM3P3-201ENST00000436601 INSRP06213 1382 aa9.42□□□□□ -0.9
LSM3P3-201ENST00000436601 MAP3K19Q56UN5 1328 aa9.42□□□□□ -0.9
LSM3P3-201ENST00000436601 PIP4K2BP78356 416 aa9.42□□□□□ -0.9
LSM3P3-201ENST00000436601 FAM9BQ8IZU0 186 aa9.42□□□□□ -0.9
LSM3P3-201ENST00000436601 ARHGEF10O15013 1369 aa9.41□□□□□ -0.9
LSM3P3-201ENST00000436601 KIF20BQ96Q89 1820 aa9.41□□□□□ -0.9
LSM3P3-201ENST00000436601 PPM1GO15355 546 aaPredicted RBP9.41□□□□□ -0.9
LSM3P3-201ENST00000436601 GCP02774 474 aa9.41□□□□□ -0.9
LSM3P3-201ENST00000436601 KCNH5Q8NCM2 988 aa9.41□□□□□ -0.9
LSM3P3-201ENST00000436601 CABLES1Q8TDN4 633 aa9.41□□□□□ -0.9
LSM3P3-201ENST00000436601 CFAP53Q96M91 514 aa9.41□□□□□ -0.9
LSM3P3-201ENST00000436601 ANKRD26Q9UPS8 1709 aa9.4□□□□□ -0.9
LSM3P3-201ENST00000436601 ADAMTS8Q9UP79 889 aa9.4□□□□□ -0.9
LSM3P3-201ENST00000436601 SLIT3O75094 1523 aa9.4□□□□□ -0.91
LSM3P3-201ENST00000436601 COL3A1P02461 1466 aaPredicted RBP9.4□□□□□ -0.91
LSM3P3-201ENST00000436601 ROBO1Q9Y6N7 1651 aa9.39□□□□□ -0.91
LSM3P3-201ENST00000436601 MED1Q15648 1581 aaPredicted RBP9.39□□□□□ -0.91
LSM3P3-201ENST00000436601 TRIM66O15016 1216 aa9.39□□□□□ -0.91
LSM3P3-201ENST00000436601 IL13P35225 146 aa9.39□□□□□ -0.91
LSM3P3-201ENST00000436601 HSP90AB2PQ58FF8 381 aa9.39□□□□□ -0.91
LSM3P3-201ENST00000436601 ARHGEF25Q86VW2 580 aa9.39□□□□□ -0.91
LSM3P3-201ENST00000436601 PDCD7Q8N8D1 485 aaKnown RBP9.39□□□□□ -0.91
LSM3P3-201ENST00000436601 LRRC59Q96AG4 307 aaKnown RBP9.39□□□□□ -0.91
LSM3P3-201ENST00000436601 YTHDC1Q96MU7 727 aaKnown RBP9.39□□□□□ -0.91
LSM3P3-201ENST00000436601 NFAT5O94916 1531 aa9.39□□□□□ -0.91
LSM3P3-201ENST00000436601 USP54Q70EL1 1684 aa9.39□□□□□ -0.91
LSM3P3-201ENST00000436601 ALS2Q96Q42 1657 aa9.39□□□□□ -0.91
LSM3P3-201ENST00000436601 NHSL1Q5SYE7 1610 aa9.38□□□□□ -0.91
LSM3P3-201ENST00000436601 AHDC1Q5TGY3 1603 aaPredicted RBP9.38□□□□□ -0.91
LSM3P3-201ENST00000436601 DIAPH1O60610 1272 aaKnown RBP9.38□□□□□ -0.91
LSM3P3-201ENST00000436601 HOXC9P31274 260 aa9.38□□□□□ -0.91
LSM3P3-201ENST00000436601 WDR43Q15061 677 aaKnown RBP eCLIP9.38□□□□□ -0.91
LSM3P3-201ENST00000436601 DPY19L2Q6NUT2 758 aa9.38□□□□□ -0.91
LSM3P3-201ENST00000436601 TMEM121BQ9BXQ6 578 aaPredicted RBP9.38□□□□□ -0.91
LSM3P3-201ENST00000436601 KDM4CQ9H3R0 1056 aa9.38□□□□□ -0.91
LSM3P3-201ENST00000436601 GPBP1L1Q9HC44 474 aaPredicted RBP9.38□□□□□ -0.91
LSM3P3-201ENST00000436601 MARF1Q9Y4F3 1742 aaKnown RBP9.38□□□□□ -0.91
LSM3P3-201ENST00000436601 CDK12Q9NYV4 1490 aaPredicted RBP9.38□□□□□ -0.91
LSM3P3-201ENST00000436601 AMPHP49418 695 aa9.37□□□□□ -0.91
LSM3P3-201ENST00000436601 ZC3H6P61129 1189 aaKnown RBP9.37□□□□□ -0.91
LSM3P3-201ENST00000436601 PDE4DQ08499 809 aa9.37□□□□□ -0.91
LSM3P3-201ENST00000436601 EIF4A2Q14240 407 aaKnown RBP9.37□□□□□ -0.91
LSM3P3-201ENST00000436601 PLPP6Q8IY26 295 aa9.37□□□□□ -0.91
LSM3P3-201ENST00000436601 IP6K1Q92551 441 aa9.37□□□□□ -0.91
LSM3P3-201ENST00000436601 FLT4P35916 1363 aa9.37□□□□□ -0.91
LSM3P3-201ENST00000436601 KIF24Q5T7B8 1368 aa9.37□□□□□ -0.91
LSM3P3-201ENST00000436601 GALR2O43603 387 aaPredicted RBP9.36□□□□□ -0.91
LSM3P3-201ENST00000436601 IER5LQ5T953 404 aa9.36□□□□□ -0.91
LSM3P3-201ENST00000436601 HOMEZQ8IX15 550 aa9.36□□□□□ -0.91
LSM3P3-201ENST00000436601 NUDCQ9Y266 331 aa9.36□□□□□ -0.91
LSM3P3-201ENST00000436601 BOLA1Q9Y3E2 137 aa9.36□□□□□ -0.91
LSM3P3-201ENST00000436601 ZBTB7CA1YPR0 619 aa9.35□□□□□ -0.91
LSM3P3-201ENST00000436601 G3V3G9 751 aa9.35□□□□□ -0.91
LSM3P3-201ENST00000436601 KIF3CO14782 793 aa9.35□□□□□ -0.91
LSM3P3-201ENST00000436601 U2SURPO15042 1029 aaKnown RBP9.35□□□□□ -0.91
LSM3P3-201ENST00000436601 GPR37O15354 613 aa9.35□□□□□ -0.91
LSM3P3-201ENST00000436601 U2AF1L5P0DN76 240 aaPredicted RBP9.35□□□□□ -0.91
LSM3P3-201ENST00000436601 U2AF1Q01081 240 aaKnown RBP eCLIP9.35□□□□□ -0.91
LSM3P3-201ENST00000436601 OCEL1Q9H607 264 aa9.35□□□□□ -0.91
LSM3P3-201ENST00000436601 PEAK1Q9H792 1746 aa9.35□□□□□ -0.91
LSM3P3-201ENST00000436601 AXIN2Q9Y2T1 843 aa9.35□□□□□ -0.91
LSM3P3-201ENST00000436601 RTL1A6NKG5 1358 aa9.35□□□□□ -0.91
LSM3P3-201ENST00000436601 CPDO75976 1380 aa9.35□□□□□ -0.91
LSM3P3-201ENST00000436601 BLMP54132 1417 aaPredicted RBP9.34□□□□□ -0.91
LSM3P3-201ENST00000436601 IRX5P78411 483 aaPredicted RBP9.34□□□□□ -0.91
LSM3P3-201ENST00000436601 CCDC146Q8IYE0 955 aa9.34□□□□□ -0.91
LSM3P3-201ENST00000436601 KIAA0232Q92628 1395 aa9.34□□□□□ -0.91
LSM3P3-201ENST00000436601 COL16A1Q07092 1604 aaPredicted RBP9.34□□□□□ -0.91
LSM3P3-201ENST00000436601 SENP3-EIF4A1A0A087X0R7 540 aa9.33□□□□□ -0.92
LSM3P3-201ENST00000436601 C2orf72A6NCS6 295 aa9.33□□□□□ -0.92
LSM3P3-201ENST00000436601 MAP3K9P80192 1104 aa9.33□□□□□ -0.92
LSM3P3-201ENST00000436601 HNRNPUQ00839 825 aaKnown RBP eCLIP9.33□□□□□ -0.92
LSM3P3-201ENST00000436601 CHRNA2Q15822 529 aa9.33□□□□□ -0.92
LSM3P3-201ENST00000436601 IL27Q8NEV9 243 aa9.33□□□□□ -0.92
LSM3P3-201ENST00000436601 LTV1Q96GA3 475 aaPredicted RBP9.33□□□□□ -0.92
LSM3P3-201ENST00000436601 PLEKHF1Q96S99 279 aa9.33□□□□□ -0.92
LSM3P3-201ENST00000436601 EYA1Q99502 592 aa9.33□□□□□ -0.92
LSM3P3-201ENST00000436601 SHPRHQ149N8 1683 aa9.32□□□□□ -0.92
LSM3P3-201ENST00000436601 FAM83GA6ND36 823 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms