RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 USP31Q70CQ4 1352 aa10.9□□□□□ -0.66
VPS50-203ENST00000436177 NINLQ9Y2I6 1382 aa10.9□□□□□ -0.66
VPS50-203ENST00000436177 ERBB3P21860 1342 aa10.9□□□□□ -0.66
VPS50-203ENST00000436177 PLSCR1O15162 318 aa10.9□□□□□ -0.66
VPS50-203ENST00000436177 ASTLQ6HA08 431 aaPredicted RBP10.9□□□□□ -0.66
VPS50-203ENST00000436177 SLC12A5Q9H2X9 1139 aa10.9□□□□□ -0.66
VPS50-203ENST00000436177 AKAP12Q02952 1782 aa10.9□□□□□ -0.67
VPS50-203ENST00000436177 RREB1Q92766 1687 aa10.89□□□□□ -0.67
VPS50-203ENST00000436177 KCNQ2O43526 872 aa10.89□□□□□ -0.67
VPS50-203ENST00000436177 ANKRD24Q8TF21 1146 aa10.89□□□□□ -0.67
VPS50-203ENST00000436177 STK32BQ9NY57 414 aa10.89□□□□□ -0.67
VPS50-203ENST00000436177 BCL9O00512 1426 aa10.89□□□□□ -0.67
VPS50-203ENST00000436177 A0A1W2PP64 1363 aa10.89□□□□□ -0.67
VPS50-203ENST00000436177 IL2RBP14784 551 aa10.88□□□□□ -0.67
VPS50-203ENST00000436177 NUP188Q5SRE5 1749 aa10.88□□□□□ -0.67
VPS50-203ENST00000436177 COG3Q96JB2 828 aa10.88□□□□□ -0.67
VPS50-203ENST00000436177 PUS7Q96PZ0 661 aaKnown RBP10.88□□□□□ -0.67
VPS50-203ENST00000436177 COL18A1P39060 1754 aa10.88□□□□□ -0.67
VPS50-203ENST00000436177 MON2Q7Z3U7 1717 aa10.87□□□□□ -0.67
VPS50-203ENST00000436177 PEAK1Q9H792 1746 aa10.87□□□□□ -0.67
VPS50-203ENST00000436177 RASEFQ8IZ41 740 aa10.87□□□□□ -0.67
VPS50-203ENST00000436177 ANO8Q9HCE9 1232 aaPredicted RBP10.87□□□□□ -0.67
VPS50-203ENST00000436177 ST20-MTHFSA0A0A6YYL1 179 aa10.86□□□□□ -0.67
VPS50-203ENST00000436177 AMPHP49418 695 aa10.86□□□□□ -0.67
VPS50-203ENST00000436177 TXNRD1Q16881 649 aa10.86□□□□□ -0.67
VPS50-203ENST00000436177 PLCD3Q8N3E9 789 aa10.86□□□□□ -0.67
VPS50-203ENST00000436177 SLC39A7Q92504 469 aa10.86□□□□□ -0.67
VPS50-203ENST00000436177 KIF12Q96FN5 646 aa10.86□□□□□ -0.67
VPS50-203ENST00000436177 LTV1Q96GA3 475 aaPredicted RBP10.86□□□□□ -0.67
VPS50-203ENST00000436177 CD163L1Q9NR16 1453 aa10.86□□□□□ -0.67
VPS50-203ENST00000436177 RGPD3A6NKT7 1758 aaPredicted RBP10.85□□□□□ -0.67
VPS50-203ENST00000436177 RGPD4Q7Z3J3 1758 aa10.85□□□□□ -0.67
VPS50-203ENST00000436177 ATN1P54259 1190 aaPredicted RBP10.85□□□□□ -0.67
VPS50-203ENST00000436177 PTF1AQ7RTS3 328 aa10.85□□□□□ -0.67
VPS50-203ENST00000436177 ACSBG1Q96GR2 724 aa10.85□□□□□ -0.67
VPS50-203ENST00000436177 WNK3Q9BYP7 1800 aa10.85□□□□□ -0.67
VPS50-203ENST00000436177 ZBTB7AO95365 584 aa10.84□□□□□ -0.67
VPS50-203ENST00000436177 TMF1P82094 1093 aa10.84□□□□□ -0.67
VPS50-203ENST00000436177 CDCA8Q53HL2 280 aa10.84□□□□□ -0.67
VPS50-203ENST00000436177 TRPC6Q9Y210 931 aa10.84□□□□□ -0.67
VPS50-203ENST00000436177 USP47Q96K76 1375 aa10.83□□□□□ -0.68
VPS50-203ENST00000436177 MAP3K13O43283 966 aa10.83□□□□□ -0.68
VPS50-203ENST00000436177 C7P10643 843 aa10.83□□□□□ -0.68
VPS50-203ENST00000436177 YY1P25490 414 aa10.83□□□□□ -0.68
VPS50-203ENST00000436177 TRIM26Q12899 539 aaPredicted RBP10.83□□□□□ -0.68
VPS50-203ENST00000436177 DDX54Q8TDD1 881 aaKnown RBP10.83□□□□□ -0.68
VPS50-203ENST00000436177 IP6K1Q92551 441 aa10.83□□□□□ -0.68
VPS50-203ENST00000436177 PLSCR2Q9NRY7 297 aa10.83□□□□□ -0.68
VPS50-203ENST00000436177 SMG6Q86US8 1419 aaKnown RBP10.83□□□□□ -0.68
VPS50-203ENST00000436177 USP54Q70EL1 1684 aa10.82□□□□□ -0.68
VPS50-203ENST00000436177 ANKRD36BQ8N2N9 1353 aa10.82□□□□□ -0.68
VPS50-203ENST00000436177 SLC15A2Q16348 729 aa10.82□□□□□ -0.68
VPS50-203ENST00000436177 SYTL4Q96C24 671 aaPredicted RBP10.82□□□□□ -0.68
VPS50-203ENST00000436177 TESK2Q96S53 571 aa10.82□□□□□ -0.68
VPS50-203ENST00000436177 MAP3K19Q56UN5 1328 aa10.82□□□□□ -0.68
VPS50-203ENST00000436177 RGPD5Q99666 1765 aa10.81□□□□□ -0.68
VPS50-203ENST00000436177 RTL1A6NKG5 1358 aa10.8□□□□□ -0.68
VPS50-203ENST00000436177 NHSQ6T4R5 1651 aa10.8□□□□□ -0.68
VPS50-203ENST00000436177 SBF2Q86WG5 1849 aa10.8□□□□□ -0.68
VPS50-203ENST00000436177 POTEJP0CG39 1038 aa10.8□□□□□ -0.68
VPS50-203ENST00000436177 HOXC9P31274 260 aa10.8□□□□□ -0.68
VPS50-203ENST00000436177 MTFR1LQ9H019 292 aa10.8□□□□□ -0.68
VPS50-203ENST00000436177 BMP2KQ9NSY1 1161 aaPredicted RBP10.8□□□□□ -0.68
VPS50-203ENST00000436177 LTN1O94822 1766 aa10.8□□□□□ -0.68
VPS50-203ENST00000436177 FKBP8Q14318 412 aa10.79□□□□□ -0.68
VPS50-203ENST00000436177 RAPGEF4Q8WZA2 1011 aa10.79□□□□□ -0.68
VPS50-203ENST00000436177 SLC27A3Q5K4L6 730 aa10.78□□□□□ -0.68
VPS50-203ENST00000436177 ZCRB1Q8TBF4 217 aaKnown RBP10.78□□□□□ -0.68
VPS50-203ENST00000436177 PDGFDQ9GZP0 370 aaPredicted RBP10.78□□□□□ -0.68
VPS50-203ENST00000436177 GGNBP2Q9H3C7 697 aa10.78□□□□□ -0.68
VPS50-203ENST00000436177 FAM208AQ9UK61 1670 aaKnown RBP10.78□□□□□ -0.68
VPS50-203ENST00000436177 RRS1Q15050 365 aaKnown RBP10.77□□□□□ -0.69
VPS50-203ENST00000436177 CGNL1Q0VF96 1302 aa10.77□□□□□ -0.69
VPS50-203ENST00000436177 CASZ1Q86V15 1759 aa10.76□□□□□ -0.69
VPS50-203ENST00000436177 TATP17735 454 aaPredicted RBP10.76□□□□□ -0.69
VPS50-203ENST00000436177 POLD1P28340 1107 aa10.76□□□□□ -0.69
VPS50-203ENST00000436177 PTGER2P43116 358 aa10.76□□□□□ -0.69
VPS50-203ENST00000436177 PRIM1P49642 420 aaKnown RBP10.76□□□□□ -0.69
VPS50-203ENST00000436177 KLHL34Q8N239 644 aa10.76□□□□□ -0.69
VPS50-203ENST00000436177 FHDC1Q9C0D6 1143 aaPredicted RBP10.76□□□□□ -0.69
VPS50-203ENST00000436177 TFCP2L1Q9NZI6 479 aa10.76□□□□□ -0.69
VPS50-203ENST00000436177 FYB1O15117 783 aa10.75□□□□□ -0.69
VPS50-203ENST00000436177 FBLN1P23142 703 aa10.75□□□□□ -0.69
VPS50-203ENST00000436177 ARXQ96QS3 562 aa10.75□□□□□ -0.69
VPS50-203ENST00000436177 FLT4P35916 1363 aa10.75□□□□□ -0.69
VPS50-203ENST00000436177 MEGF6O75095 1541 aa10.74□□□□□ -0.69
VPS50-203ENST00000436177 PPM1GO15355 546 aaPredicted RBP10.74□□□□□ -0.69
VPS50-203ENST00000436177 HMGB2P26583 209 aaKnown RBP10.74□□□□□ -0.69
VPS50-203ENST00000436177 ZNF827Q17R98 1081 aa10.74□□□□□ -0.69
VPS50-203ENST00000436177 USHBP1Q8N6Y0 703 aa10.74□□□□□ -0.69
VPS50-203ENST00000436177 PCDH11XQ9BZA7 1347 aa10.74□□□□□ -0.69
VPS50-203ENST00000436177 PCDH11YQ9BZA8 1340 aa10.74□□□□□ -0.69
VPS50-203ENST00000436177 KAT6BQ8WYB5 2073 aa10.73□□□□□ -0.69
VPS50-203ENST00000436177 MYOM1P52179 1685 aa10.73□□□□□ -0.69
VPS50-203ENST00000436177 BTAF1O14981 1849 aa10.73□□□□□ -0.69
VPS50-203ENST00000436177 NBPF6Q5VWK0 638 aa10.73□□□□□ -0.69
VPS50-203ENST00000436177 SLC16A10Q8TF71 515 aa10.73□□□□□ -0.69
VPS50-203ENST00000436177 NBPF4Q96M43 638 aa10.73□□□□□ -0.69
VPS50-203ENST00000436177 SYT17Q9BSW7 474 aa10.73□□□□□ -0.69
VPS50-203ENST00000436177 POLR3GLQ9BT43 218 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms