RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 QSER1Q2KHR3 1735 aa15.39■□□□□ 0.05
SPTLC1P4-201ENST00000435997 DOT1LQ8TEK3 1739 aa15.39■□□□□ 0.05
SPTLC1P4-201ENST00000435997 DCAF8L1A6NGE4 600 aa15.38■□□□□ 0.05
SPTLC1P4-201ENST00000435997 TMF1P82094 1093 aa15.38■□□□□ 0.05
SPTLC1P4-201ENST00000435997 RRS1Q15050 365 aaKnown RBP15.38■□□□□ 0.05
SPTLC1P4-201ENST00000435997 CGNL1Q0VF96 1302 aa15.38■□□□□ 0.05
SPTLC1P4-201ENST00000435997 PNPLA7Q6ZV29 1317 aa15.38■□□□□ 0.05
SPTLC1P4-201ENST00000435997 COL24A1Q17RW2 1714 aa15.37■□□□□ 0.05
SPTLC1P4-201ENST00000435997 PRIM1P49642 420 aaKnown RBP15.37■□□□□ 0.05
SPTLC1P4-201ENST00000435997 NBPF6Q5VWK0 638 aa15.37■□□□□ 0.05
SPTLC1P4-201ENST00000435997 ZCRB1Q8TBF4 217 aaKnown RBP15.37■□□□□ 0.05
SPTLC1P4-201ENST00000435997 NBPF4Q96M43 638 aa15.37■□□□□ 0.05
SPTLC1P4-201ENST00000435997 GGNBP2Q9H3C7 697 aa15.37■□□□□ 0.05
SPTLC1P4-201ENST00000435997 LY75O60449 1722 aa15.37■□□□□ 0.05
SPTLC1P4-201ENST00000435997 INSRP06213 1382 aa15.36■□□□□ 0.05
SPTLC1P4-201ENST00000435997 NCAPD2Q15021 1401 aa15.36■□□□□ 0.05
SPTLC1P4-201ENST00000435997 SMG6Q86US8 1419 aaKnown RBP15.36■□□□□ 0.05
SPTLC1P4-201ENST00000435997 SLC16A10Q8TF71 515 aa15.36■□□□□ 0.05
SPTLC1P4-201ENST00000435997 ARXQ96QS3 562 aa15.36■□□□□ 0.05
SPTLC1P4-201ENST00000435997 FLT4P35916 1363 aa15.36■□□□□ 0.05
SPTLC1P4-201ENST00000435997 CACNB1Q02641 598 aaPredicted RBP15.35■□□□□ 0.05
SPTLC1P4-201ENST00000435997 RGPD2P0DJD1 1756 aa15.34■□□□□ 0.05
SPTLC1P4-201ENST00000435997 TRIM26Q12899 539 aaPredicted RBP15.33■□□□□ 0.04
SPTLC1P4-201ENST00000435997 CDCA8Q53HL2 280 aa15.33■□□□□ 0.04
SPTLC1P4-201ENST00000435997 SYTL4Q96C24 671 aaPredicted RBP15.33■□□□□ 0.04
SPTLC1P4-201ENST00000435997 KIF20BQ96Q89 1820 aa15.32■□□□□ 0.04
SPTLC1P4-201ENST00000435997 TUBGCP6Q96RT7 1819 aa15.32■□□□□ 0.04
SPTLC1P4-201ENST00000435997 KCNQ4P56696 695 aa15.32■□□□□ 0.04
SPTLC1P4-201ENST00000435997 HSP90AB2PQ58FF8 381 aa15.32■□□□□ 0.04
SPTLC1P4-201ENST00000435997 USHBP1Q8N6Y0 703 aa15.32■□□□□ 0.04
SPTLC1P4-201ENST00000435997 CARD14Q9BXL6 1004 aa15.32■□□□□ 0.04
SPTLC1P4-201ENST00000435997 GOLGB1Q14789 3259 aaKnown RBP15.32■□□□□ 0.04
SPTLC1P4-201ENST00000435997 NSD3Q9BZ95 1437 aa15.32■□□□□ 0.04
SPTLC1P4-201ENST00000435997 ANKRD26Q9UPS8 1709 aa15.31■□□□□ 0.04
SPTLC1P4-201ENST00000435997 ZNF784Q8NCA9 323 aaPredicted RBP15.31■□□□□ 0.04
SPTLC1P4-201ENST00000435997 PCDH11XQ9BZA7 1347 aa15.31■□□□□ 0.04
SPTLC1P4-201ENST00000435997 PCDH11YQ9BZA8 1340 aa15.31■□□□□ 0.04
SPTLC1P4-201ENST00000435997 RAPGEF4Q8WZA2 1011 aa15.3■□□□□ 0.04
SPTLC1P4-201ENST00000435997 TFCP2L1Q9NZI6 479 aa15.3■□□□□ 0.04
SPTLC1P4-201ENST00000435997 CCNL1Q9UK58 526 aaPredicted RBP15.3■□□□□ 0.04
SPTLC1P4-201ENST00000435997 PKD1L3Q7Z443 1732 aa15.29■□□□□ 0.04
SPTLC1P4-201ENST00000435997 CYP27B1O15528 508 aa15.28■□□□□ 0.04
SPTLC1P4-201ENST00000435997 TATP17735 454 aaPredicted RBP15.28■□□□□ 0.04
SPTLC1P4-201ENST00000435997 POLD1P28340 1107 aa15.28■□□□□ 0.04
SPTLC1P4-201ENST00000435997 TIMELESSQ9UNS1 1208 aa15.28■□□□□ 0.04
SPTLC1P4-201ENST00000435997 EMILIN1Q9Y6C2 1016 aa15.28■□□□□ 0.04
SPTLC1P4-201ENST00000435997 TOGARAM1Q9Y4F4 1720 aa15.28■□□□□ 0.04
SPTLC1P4-201ENST00000435997 PALLDQ8WX93 1383 aa15.27■□□□□ 0.04
SPTLC1P4-201ENST00000435997 CLSPNQ9HAW4 1339 aa15.26■□□□□ 0.03
SPTLC1P4-201ENST00000435997 COL23A1Q86Y22 540 aaPredicted RBP15.26■□□□□ 0.03
SPTLC1P4-201ENST00000435997 C5P01031 1676 aa15.25■□□□□ 0.03
SPTLC1P4-201ENST00000435997 WASHC2AQ641Q2 1341 aa15.25■□□□□ 0.03
SPTLC1P4-201ENST00000435997 PLEKHG2Q9H7P9 1386 aa15.24■□□□□ 0.03
SPTLC1P4-201ENST00000435997 NKX1-1Q15270 411 aaPredicted RBP15.24■□□□□ 0.03
SPTLC1P4-201ENST00000435997 NLGN2Q8NFZ4 835 aa15.24■□□□□ 0.03
SPTLC1P4-201ENST00000435997 KAT6BQ8WYB5 2073 aa15.22■□□□□ 0.03
SPTLC1P4-201ENST00000435997 C4BP0C0L5 1744 aa15.21■□□□□ 0.03
SPTLC1P4-201ENST00000435997 HMGB2P26583 209 aaKnown RBP15.21■□□□□ 0.03
SPTLC1P4-201ENST00000435997 GPR162Q16538 588 aa15.21■□□□□ 0.03
SPTLC1P4-201ENST00000435997 MPRIPQ6WCQ1 1025 aa15.21■□□□□ 0.03
SPTLC1P4-201ENST00000435997 AMIGO3Q86WK7 504 aa15.21■□□□□ 0.03
SPTLC1P4-201ENST00000435997 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.21■□□□□ 0.03
SPTLC1P4-201ENST00000435997 POLKQ9UBT6 870 aa15.21■□□□□ 0.03
SPTLC1P4-201ENST00000435997 CHD4Q14839 1912 aa15.2■□□□□ 0.02
SPTLC1P4-201ENST00000435997 PIGBQ92521 554 aa15.2■□□□□ 0.02
SPTLC1P4-201ENST00000435997 SMARCC1Q92922 1105 aaPredicted RBP15.2■□□□□ 0.02
SPTLC1P4-201ENST00000435997 EYA1Q99502 592 aa15.2■□□□□ 0.02
SPTLC1P4-201ENST00000435997 TAF1LQ8IZX4 1826 aa15.2■□□□□ 0.02
SPTLC1P4-201ENST00000435997 YBX3P16989 372 aaKnown RBP eCLIP15.19■□□□□ 0.02
SPTLC1P4-201ENST00000435997 KLHL34Q8N239 644 aa15.19■□□□□ 0.02
SPTLC1P4-201ENST00000435997 FLAD1Q8NFF5 587 aa15.19■□□□□ 0.02
SPTLC1P4-201ENST00000435997 MAP2P11137 1827 aaKnown RBP15.19■□□□□ 0.02
SPTLC1P4-201ENST00000435997 MSL1Q68DK7 614 aa15.18■□□□□ 0.02
SPTLC1P4-201ENST00000435997 SPG7Q9UQ90 795 aa15.18■□□□□ 0.02
SPTLC1P4-201ENST00000435997 KDRP35968 1356 aa15.17■□□□□ 0.02
SPTLC1P4-201ENST00000435997 PPM1GO15355 546 aaPredicted RBP15.17■□□□□ 0.02
SPTLC1P4-201ENST00000435997 CD2APQ9Y5K6 639 aa15.17■□□□□ 0.02
SPTLC1P4-201ENST00000435997 ITGB4P16144 1822 aa15.17■□□□□ 0.02
SPTLC1P4-201ENST00000435997 LOC102724428A0A0B4J2F2 783 aa15.16■□□□□ 0.02
SPTLC1P4-201ENST00000435997 PHKG2P15735 406 aa15.16■□□□□ 0.02
SPTLC1P4-201ENST00000435997 SIK1P57059 783 aa15.16■□□□□ 0.02
SPTLC1P4-201ENST00000435997 EIF4A2Q14240 407 aaKnown RBP15.16■□□□□ 0.02
SPTLC1P4-201ENST00000435997 LINC00116Q8NCU8 138 aa15.16■□□□□ 0.02
SPTLC1P4-201ENST00000435997 IGSF1Q8N6C5 1336 aa15.16■□□□□ 0.02
SPTLC1P4-201ENST00000435997 UBR3Q6ZT12 1888 aa15.15■□□□□ 0.02
SPTLC1P4-201ENST00000435997 C1QTNF8P60827 252 aa15.15■□□□□ 0.02
SPTLC1P4-201ENST00000435997 AK7Q96M32 723 aa15.15■□□□□ 0.02
SPTLC1P4-201ENST00000435997 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.14■□□□□ 0.01
SPTLC1P4-201ENST00000435997 GRIN3BO60391 1043 aa15.14■□□□□ 0.01
SPTLC1P4-201ENST00000435997 SSFA2P28290 1259 aa15.14■□□□□ 0.01
SPTLC1P4-201ENST00000435997 ITPK1Q13572 414 aa15.13■□□□□ 0.01
SPTLC1P4-201ENST00000435997 IFNL2Q8IZJ0 200 aa15.13■□□□□ 0.01
SPTLC1P4-201ENST00000435997 PELP1Q8IZL8 1130 aaKnown RBP15.13■□□□□ 0.01
SPTLC1P4-201ENST00000435997 TMOD3Q9NYL9 352 aa15.13■□□□□ 0.01
SPTLC1P4-201ENST00000435997 ASAP1Q9ULH1 1129 aa15.13■□□□□ 0.01
SPTLC1P4-201ENST00000435997 ADCY9O60503 1353 aa15.12■□□□□ 0.01
SPTLC1P4-201ENST00000435997 KDM6AO15550 1401 aaPredicted RBP15.11■□□□□ 0.01
SPTLC1P4-201ENST00000435997 SMIM5Q71RC9 77 aa15.11■□□□□ 0.01
SPTLC1P4-201ENST00000435997 ATG3Q9NT62 314 aa15.11■□□□□ 0.01
SPTLC1P4-201ENST00000435997 ZNF831Q5JPB2 1677 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms