RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 NLRP2Q9NX02 1062 aa15.15■□□□□ 0.02
CPNE1-214ENST00000435747 QRICH2Q9H0J4 1663 aa15.15■□□□□ 0.02
CPNE1-214ENST00000435747 DCAF11Q8TEB1 546 aa15.13■□□□□ 0.01
CPNE1-214ENST00000435747 CABP2Q9NPB3 220 aa15.12■□□□□ 0.01
CPNE1-214ENST00000435747 PRIM1P49642 420 aaKnown RBP15.11■□□□□ 0.01
CPNE1-214ENST00000435747 FLAD1Q8NFF5 587 aa15.11■□□□□ 0.01
CPNE1-214ENST00000435747 DDX54Q8TDD1 881 aaKnown RBP15.11■□□□□ 0.01
CPNE1-214ENST00000435747 CABP1Q9NZU7 370 aa15.11■□□□□ 0.01
CPNE1-214ENST00000435747 DOT1LQ8TEK3 1739 aa15.11■□□□□ 0.01
CPNE1-214ENST00000435747 ERBB3P21860 1342 aa15.11■□□□□ 0.01
CPNE1-214ENST00000435747 NFAT5O94916 1531 aa15.1■□□□□ 0.01
CPNE1-214ENST00000435747 ANKRD36BQ8N2N9 1353 aa15.1■□□□□ 0.01
CPNE1-214ENST00000435747 STAC3Q96MF2 364 aa15.08■□□□□ 0
CPNE1-214ENST00000435747 C5P01031 1676 aa15.08■□□□□ 0
CPNE1-214ENST00000435747 NSD2O96028 1365 aa15.07■□□□□ 0
CPNE1-214ENST00000435747 USP47Q96K76 1375 aa15.07■□□□□ 0
CPNE1-214ENST00000435747 USP54Q70EL1 1684 aa15.06■□□□□ 0
CPNE1-214ENST00000435747 ARHGAP27Q6ZUM4 889 aa15.06■□□□□ 0
CPNE1-214ENST00000435747 TTC21BQ7Z4L5 1316 aa15.06■□□□□ 0
CPNE1-214ENST00000435747 HMGB2P26583 209 aaKnown RBP15.05■□□□□ -0
CPNE1-214ENST00000435747 SMC1BQ8NDV3 1235 aa15.05■□□□□ -0
CPNE1-214ENST00000435747 ANKRD24Q8TF21 1146 aa15.05■□□□□ -0
CPNE1-214ENST00000435747 PLEKHG2Q9H7P9 1386 aa15.05■□□□□ -0
CPNE1-214ENST00000435747 TAF1LQ8IZX4 1826 aa15.05■□□□□ -0
CPNE1-214ENST00000435747 LTN1O94822 1766 aa15.04■□□□□ -0
CPNE1-214ENST00000435747 TTC21AQ8NDW8 1320 aa15.04■□□□□ -0
CPNE1-214ENST00000435747 KDM2BQ8NHM5 1336 aa15.04■□□□□ -0
CPNE1-214ENST00000435747 BCS1LQ9Y276 419 aa15.04■□□□□ -0
CPNE1-214ENST00000435747 KCPQ6ZWJ8 1503 aa15.02■□□□□ -0
CPNE1-214ENST00000435747 C10orf71Q711Q0 1435 aa15.02■□□□□ -0
CPNE1-214ENST00000435747 CENPJQ9HC77 1338 aaPredicted RBP15.02■□□□□ -0
CPNE1-214ENST00000435747 FAM161AQ3B820 660 aa15.02■□□□□ -0
CPNE1-214ENST00000435747 C9orf131Q5VYM1 1079 aa15.02■□□□□ -0
CPNE1-214ENST00000435747 N4BP2Q86UW6 1770 aaPredicted RBP15.02□□□□□ -0.01
CPNE1-214ENST00000435747 PKD1L3Q7Z443 1732 aa15.02□□□□□ -0.01
CPNE1-214ENST00000435747 KIAA1210Q9ULL0 1709 aa15.02□□□□□ -0.01
CPNE1-214ENST00000435747 TNRC6CQ9HCJ0 1690 aaKnown RBP15.01□□□□□ -0.01
CPNE1-214ENST00000435747 AK7Q96M32 723 aa15.01□□□□□ -0.01
CPNE1-214ENST00000435747 ZNF692Q9BU19 519 aaPredicted RBP15.01□□□□□ -0.01
CPNE1-214ENST00000435747 RRAGCQ9HB90 399 aa15.01□□□□□ -0.01
CPNE1-214ENST00000435747 PXDNLA1KZ92 1463 aa15.01□□□□□ -0.01
CPNE1-214ENST00000435747 PHF14O94880 888 aa15□□□□□ -0.01
CPNE1-214ENST00000435747 KIF13BQ9NQT8 1826 aa15□□□□□ -0.01
CPNE1-214ENST00000435747 UBR3Q6ZT12 1888 aa14.99□□□□□ -0.01
CPNE1-214ENST00000435747 C4BP0C0L5 1744 aa14.99□□□□□ -0.01
CPNE1-214ENST00000435747 KIAA1551Q9HCM1 1747 aa14.98□□□□□ -0.01
CPNE1-214ENST00000435747 TOGARAM1Q9Y4F4 1720 aa14.98□□□□□ -0.01
CPNE1-214ENST00000435747 NSD3Q9BZ95 1437 aa14.98□□□□□ -0.01
CPNE1-214ENST00000435747 FAM208AQ9UK61 1670 aaKnown RBP14.97□□□□□ -0.01
CPNE1-214ENST00000435747 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.97□□□□□ -0.01
CPNE1-214ENST00000435747 FCHSD2O94868 740 aa14.97□□□□□ -0.01
CPNE1-214ENST00000435747 TGFB2P61812 414 aa14.97□□□□□ -0.01
CPNE1-214ENST00000435747 A0A0G2JLW4 131 aa14.96□□□□□ -0.01
CPNE1-214ENST00000435747 AMIGO3Q86WK7 504 aa14.96□□□□□ -0.01
CPNE1-214ENST00000435747 BRCA1P38398 1863 aaKnown RBP14.95□□□□□ -0.02
CPNE1-214ENST00000435747 ARFGEF1Q9Y6D6 1849 aa14.95□□□□□ -0.02
CPNE1-214ENST00000435747 SMIM5Q71RC9 77 aa14.95□□□□□ -0.02
CPNE1-214ENST00000435747 ZCRB1Q8TBF4 217 aaKnown RBP14.95□□□□□ -0.02
CPNE1-214ENST00000435747 PRDM10Q9NQV6 1147 aa14.95□□□□□ -0.02
CPNE1-214ENST00000435747 PALLDQ8WX93 1383 aa14.95□□□□□ -0.02
CPNE1-214ENST00000435747 LTV1Q96GA3 475 aaPredicted RBP14.94□□□□□ -0.02
CPNE1-214ENST00000435747 RNF181Q9P0P0 153 aa14.94□□□□□ -0.02
CPNE1-214ENST00000435747 KTN1Q86UP2 1357 aaKnown RBP14.94□□□□□ -0.02
CPNE1-214ENST00000435747 EVC2Q86UK5 1308 aa14.93□□□□□ -0.02
CPNE1-214ENST00000435747 FOXN1O15353 648 aa14.93□□□□□ -0.02
CPNE1-214ENST00000435747 MMP10P09238 476 aa14.93□□□□□ -0.02
CPNE1-214ENST00000435747 SSFA2P28290 1259 aa14.93□□□□□ -0.02
CPNE1-214ENST00000435747 NBPF1Q3BBV0 1214 aa14.93□□□□□ -0.02
CPNE1-214ENST00000435747 USP31Q70CQ4 1352 aa14.93□□□□□ -0.02
CPNE1-214ENST00000435747 PDE4DIPQ5VU43 2346 aa14.92□□□□□ -0.02
CPNE1-214ENST00000435747 SBF1O95248 1867 aa14.92□□□□□ -0.02
CPNE1-214ENST00000435747 DPEP1P16444 411 aa14.91□□□□□ -0.02
CPNE1-214ENST00000435747 MLLT1Q03111 559 aaPredicted RBP14.91□□□□□ -0.02
CPNE1-214ENST00000435747 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.91□□□□□ -0.02
CPNE1-214ENST00000435747 MON2Q7Z3U7 1717 aa14.91□□□□□ -0.02
CPNE1-214ENST00000435747 MEGF6O75095 1541 aa14.89□□□□□ -0.03
CPNE1-214ENST00000435747 CTCFP49711 727 aaPredicted RBP14.89□□□□□ -0.03
CPNE1-214ENST00000435747 NME9Q86XW9 330 aa14.89□□□□□ -0.03
CPNE1-214ENST00000435747 AIDAQ96BJ3 306 aa14.89□□□□□ -0.03
CPNE1-214ENST00000435747 ABHD8Q96I13 439 aa14.89□□□□□ -0.03
CPNE1-214ENST00000435747 MKRN1Q9UHC7 482 aaKnown RBP14.89□□□□□ -0.03
CPNE1-214ENST00000435747 RGPD2P0DJD1 1756 aa14.88□□□□□ -0.03
CPNE1-214ENST00000435747 VEGFAP15692 232 aaPredicted RBP14.88□□□□□ -0.03
CPNE1-214ENST00000435747 MPRIPQ6WCQ1 1025 aa14.88□□□□□ -0.03
CPNE1-214ENST00000435747 IP6K1Q92551 441 aa14.88□□□□□ -0.03
CPNE1-214ENST00000435747 SMARCC1Q92922 1105 aaPredicted RBP14.88□□□□□ -0.03
CPNE1-214ENST00000435747 CCDC87Q9NVE4 849 aa14.88□□□□□ -0.03
CPNE1-214ENST00000435747 L3MBTL2Q969R5 705 aa14.87□□□□□ -0.03
CPNE1-214ENST00000435747 SIN3AQ96ST3 1273 aa14.87□□□□□ -0.03
CPNE1-214ENST00000435747 DCAF5Q96JK2 942 aa14.86□□□□□ -0.03
CPNE1-214ENST00000435747 PIM2Q9P1W9 311 aa14.86□□□□□ -0.03
CPNE1-214ENST00000435747 ITGB4P16144 1822 aa14.86□□□□□ -0.03
CPNE1-214ENST00000435747 GNPATO15228 680 aa14.85□□□□□ -0.03
CPNE1-214ENST00000435747 DALRD3Q5D0E6 543 aaKnown RBP14.85□□□□□ -0.03
CPNE1-214ENST00000435747 CREBZFQ9NS37 354 aa14.85□□□□□ -0.03
CPNE1-214ENST00000435747 ZC3H4Q9UPT8 1303 aaKnown RBP14.85□□□□□ -0.03
CPNE1-214ENST00000435747 LINC00116Q8NCU8 138 aa14.84□□□□□ -0.03
CPNE1-214ENST00000435747 CGNL1Q0VF96 1302 aa14.84□□□□□ -0.03
CPNE1-214ENST00000435747 C4AP0C0L4 1744 aa14.83□□□□□ -0.03
CPNE1-214ENST00000435747 KCNA3P22001 575 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms