RNA–Protein interactions for RNA: ENST00000435706.6

TOP2B-204, Transcript of DNA topoisomerase II beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOP2B, Length 5,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-204ENST00000435706 SPDYE4A6NLX3 237 aa26.41■■□□□ 1.82
TOP2B-204ENST00000435706 ZSCAN12O43309 604 aa26.41■■□□□ 1.82
TOP2B-204ENST00000435706 IGHDP01880 384 aa26.41■■□□□ 1.82
TOP2B-204ENST00000435706 ARHGAP29Q52LW3 1261 aa26.41■■□□□ 1.82
TOP2B-204ENST00000435706 GOLGA6L7A0A1B0GV03 622 aa26.41■■□□□ 1.82
TOP2B-204ENST00000435706 FCHSD2O94868 740 aa26.41■■□□□ 1.82
TOP2B-204ENST00000435706 TRHP20396 242 aaPredicted RBP26.41■■□□□ 1.82
TOP2B-204ENST00000435706 SIL1Q9H173 461 aa26.41■■□□□ 1.82
TOP2B-204ENST00000435706 ANKRD30BQ9BXX2 1392 aa26.41■■□□□ 1.82
TOP2B-204ENST00000435706 EXOC6BQ9Y2D4 811 aa26.4■■□□□ 1.82
TOP2B-204ENST00000435706 NLRP6P59044 892 aa26.4■■□□□ 1.82
TOP2B-204ENST00000435706 ZSCAN23Q3MJ62 389 aa26.4■■□□□ 1.82
TOP2B-204ENST00000435706 TRIM34Q9BYJ4 488 aa26.4■■□□□ 1.82
TOP2B-204ENST00000435706 ANO10Q9NW15 660 aa26.4■■□□□ 1.82
TOP2B-204ENST00000435706 MX1P20591 662 aa26.4■■□□□ 1.82
TOP2B-204ENST00000435706 LUC7LQ9NQ29 371 aaKnown RBP26.4■■□□□ 1.82
TOP2B-204ENST00000435706 RBM27Q9P2N5 1060 aaKnown RBP26.4■■□□□ 1.82
TOP2B-204ENST00000435706 SMARCA5O60264 1052 aaPredicted RBP26.39■■□□□ 1.82
TOP2B-204ENST00000435706 URI1O94763 535 aaPredicted RBP26.39■■□□□ 1.82
TOP2B-204ENST00000435706 TRIM22Q8IYM9 498 aa26.39■■□□□ 1.82
TOP2B-204ENST00000435706 EPB41L2O43491 1005 aaKnown RBP26.39■■□□□ 1.82
TOP2B-204ENST00000435706 PRAM1Q96QH2 718 aa26.39■■□□□ 1.82
TOP2B-204ENST00000435706 CENPHQ9H3R5 247 aa26.39■■□□□ 1.82
TOP2B-204ENST00000435706 ALDH1L2Q3SY69 923 aa26.39■■□□□ 1.81
TOP2B-204ENST00000435706 NUTM2GQ5VZR2 741 aa26.39■■□□□ 1.81
TOP2B-204ENST00000435706 STIM1Q13586 685 aa26.38■■□□□ 1.81
TOP2B-204ENST00000435706 CCDC43Q96MW1 224 aaKnown RBP26.38■■□□□ 1.81
TOP2B-204ENST00000435706 TRERF1Q96PN7 1200 aa26.38■■□□□ 1.81
TOP2B-204ENST00000435706 ARHGAP5Q13017 1502 aa26.38■■□□□ 1.81
TOP2B-204ENST00000435706 EVA1CP58658 441 aa26.38■■□□□ 1.81
TOP2B-204ENST00000435706 DDX11Q96FC9 970 aa26.38■■□□□ 1.81
TOP2B-204ENST00000435706 POLR3GO15318 223 aaPredicted RBP26.38■■□□□ 1.81
TOP2B-204ENST00000435706 TXLNBQ8N3L3 684 aa26.38■■□□□ 1.81
TOP2B-204ENST00000435706 UVSSAQ2YD98 709 aa26.37■■□□□ 1.81
TOP2B-204ENST00000435706 NUTM1Q86Y26 1132 aa26.37■■□□□ 1.81
TOP2B-204ENST00000435706 NFE2L2Q16236 605 aa26.37■■□□□ 1.81
TOP2B-204ENST00000435706 STK11IPQ8N1F8 1099 aa26.37■■□□□ 1.81
TOP2B-204ENST00000435706 CDK5RAP3Q96JB5 506 aa26.37■■□□□ 1.81
TOP2B-204ENST00000435706 NSD3Q9BZ95 1437 aa26.37■■□□□ 1.81
TOP2B-204ENST00000435706 NEMFO60524 1076 aa26.37■■□□□ 1.81
TOP2B-204ENST00000435706 CCDC158Q5M9N0 1113 aa26.36■■□□□ 1.81
TOP2B-204ENST00000435706 LRRFIP2Q9Y608 721 aaKnown RBP26.36■■□□□ 1.81
TOP2B-204ENST00000435706 TTC39AQ5SRH9 613 aa26.36■■□□□ 1.81
TOP2B-204ENST00000435706 ZFYVE27Q5T4F4 411 aa26.36■■□□□ 1.81
TOP2B-204ENST00000435706 CRACR2AQ9BSW2 395 aa26.36■■□□□ 1.81
TOP2B-204ENST00000435706 MTMR7Q9Y216 660 aa26.36■■□□□ 1.81
TOP2B-204ENST00000435706 BMP2KLQ5H9B9 411 aa26.35■■□□□ 1.81
TOP2B-204ENST00000435706 TBC1D9Q6ZT07 1266 aa26.35■■□□□ 1.81
TOP2B-204ENST00000435706 GDPD2Q9HCC8 539 aa26.35■■□□□ 1.81
TOP2B-204ENST00000435706 GTF2F1P35269 517 aaKnown RBP eCLIP26.35■■□□□ 1.81
TOP2B-204ENST00000435706 SH2B1Q9NRF2 756 aaPredicted RBP26.35■■□□□ 1.81
TOP2B-204ENST00000435706 TRMT1Q9NXH9 659 aaKnown RBP26.35■■□□□ 1.81
TOP2B-204ENST00000435706 CABP1Q9NZU7 370 aa26.35■■□□□ 1.81
TOP2B-204ENST00000435706 CASQ1P31415 396 aa26.34■■□□□ 1.81
TOP2B-204ENST00000435706 CKAP2LQ8IYA6 745 aa26.34■■□□□ 1.81
TOP2B-204ENST00000435706 CDKL5O76039 1030 aa26.34■■□□□ 1.81
TOP2B-204ENST00000435706 LRSAM1Q6UWE0 723 aa26.34■■□□□ 1.81
TOP2B-204ENST00000435706 CCDC148Q8NFR7 591 aa26.34■■□□□ 1.81
TOP2B-204ENST00000435706 DHX29Q7Z478 1369 aaKnown RBP26.34■■□□□ 1.81
TOP2B-204ENST00000435706 PRPF40BQ6NWY9 871 aaKnown RBP26.34■■□□□ 1.81
TOP2B-204ENST00000435706 SHTN1A0MZ66 631 aa26.33■■□□□ 1.81
TOP2B-204ENST00000435706 CCAR1Q8IX12 1150 aaKnown RBP26.33■■□□□ 1.81
TOP2B-204ENST00000435706 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.33■■□□□ 1.814e-7■■□□□ 12
TOP2B-204ENST00000435706 GPRASP1Q5JY77 1395 aa26.32■■□□□ 1.8
TOP2B-204ENST00000435706 SUPT6HQ7KZ85 1726 aaKnown RBP26.32■■□□□ 1.8
TOP2B-204ENST00000435706 TRIM27P14373 513 aa26.31■■□□□ 1.8
TOP2B-204ENST00000435706 PLEKHO1Q53GL0 409 aaPredicted RBP26.31■■□□□ 1.8
TOP2B-204ENST00000435706 CDK19Q9BWU1 502 aa26.31■■□□□ 1.8
TOP2B-204ENST00000435706 CCDC69A6NI79 296 aa26.31■■□□□ 1.8
TOP2B-204ENST00000435706 C8orf34Q49A92 452 aa26.31■■□□□ 1.8
TOP2B-204ENST00000435706 AFAP1Q8N556 730 aa26.31■■□□□ 1.8
TOP2B-204ENST00000435706 GIMAP7Q8NHV1 300 aa26.31■■□□□ 1.8
TOP2B-204ENST00000435706 LIMCH1Q9UPQ0 1083 aa26.31■■□□□ 1.8
TOP2B-204ENST00000435706 DDX19AQ9NUU7 478 aaKnown RBP26.3■■□□□ 1.8
TOP2B-204ENST00000435706 NLRP2Q9NX02 1062 aa26.3■■□□□ 1.8
TOP2B-204ENST00000435706 JAKMIP3Q5VZ66 844 aa26.3■■□□□ 1.8
TOP2B-204ENST00000435706 KIAA1328Q86T90 577 aa26.3■■□□□ 1.8
TOP2B-204ENST00000435706 CTAGE5O15320 804 aa26.29■■□□□ 1.8
TOP2B-204ENST00000435706 KIF5CO60282 957 aa26.29■■□□□ 1.8
TOP2B-204ENST00000435706 ABCC11Q96J66 1382 aa26.29■■□□□ 1.8
TOP2B-204ENST00000435706 TOP1P11387 765 aaKnown RBP26.29■■□□□ 1.8
TOP2B-204ENST00000435706 MAP3K1Q13233 1512 aa26.28■■□□□ 1.8
TOP2B-204ENST00000435706 NOL7Q9UMY1 257 aaKnown RBP26.28■■□□□ 1.8
TOP2B-204ENST00000435706 PAXBP1Q9Y5B6 917 aa26.28■■□□□ 1.8
TOP2B-204ENST00000435706 GSDMDP57764 484 aa26.28■■□□□ 1.8
TOP2B-204ENST00000435706 BMS1Q14692 1282 aaKnown RBP26.28■■□□□ 1.8
TOP2B-204ENST00000435706 MAP9Q49MG5 647 aa26.28■■□□□ 1.8
TOP2B-204ENST00000435706 CTNNA3Q9UI47 895 aa26.28■■□□□ 1.8
TOP2B-204ENST00000435706 GLRX3O76003 335 aaKnown RBP26.28■■□□□ 1.8
TOP2B-204ENST00000435706 SYTL4Q96C24 671 aaPredicted RBP26.28■■□□□ 1.8
TOP2B-204ENST00000435706 KIF1BPQ96EK5 621 aa26.28■■□□□ 1.8
TOP2B-204ENST00000435706 TANGO6Q9C0B7 1094 aa26.28■■□□□ 1.8
TOP2B-204ENST00000435706 DHX37Q8IY37 1157 aaKnown RBP26.27■■□□□ 1.8
TOP2B-204ENST00000435706 THUMPD2Q9BTF0 503 aaKnown RBP26.27■■□□□ 1.8
TOP2B-204ENST00000435706 KIF4BQ2VIQ3 1234 aa26.27■■□□□ 1.8
TOP2B-204ENST00000435706 NOLC1Q14978 699 aaKnown RBP eCLIP26.27■■□□□ 1.81e-6■■■□□ 16.6
TOP2B-204ENST00000435706 CTDP1Q9Y5B0 961 aaPredicted RBP26.27■■□□□ 1.8
TOP2B-204ENST00000435706 ZKSCAN5Q9Y2L8 839 aa26.27■■□□□ 1.8
TOP2B-204ENST00000435706 CEP135Q66GS9 1140 aa26.26■■□□□ 1.79
TOP2B-204ENST00000435706 RAB11FIP3O75154 756 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms