RNA–Protein interactions for RNA: ENST00000435354.1

LINC01006-204, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-204ENST00000435354 ZBTB7AO95365 584 aa19.97■□□□□ 0.79
LINC01006-204ENST00000435354 ZCRB1Q8TBF4 217 aaKnown RBP19.97■□□□□ 0.79
LINC01006-204ENST00000435354 PPP1R1BQ9UD71 204 aaPredicted RBP19.97■□□□□ 0.79
LINC01006-204ENST00000435354 KIF24Q5T7B8 1368 aa19.96■□□□□ 0.79
LINC01006-204ENST00000435354 LRRC4BQ9NT99 713 aa19.96■□□□□ 0.79
LINC01006-204ENST00000435354 ANKRD26Q9UPS8 1709 aa19.96■□□□□ 0.79
LINC01006-204ENST00000435354 NSD2O96028 1365 aa19.95■□□□□ 0.79
LINC01006-204ENST00000435354 EMILIN1Q9Y6C2 1016 aa19.95■□□□□ 0.78
LINC01006-204ENST00000435354 PTGER2P43116 358 aa19.94■□□□□ 0.78
LINC01006-204ENST00000435354 PRIM1P49642 420 aaKnown RBP19.94■□□□□ 0.78
LINC01006-204ENST00000435354 ZNF827Q17R98 1081 aa19.93■□□□□ 0.78
LINC01006-204ENST00000435354 CGNL1Q0VF96 1302 aa19.93■□□□□ 0.78
LINC01006-204ENST00000435354 RAPGEF4Q8WZA2 1011 aa19.92■□□□□ 0.78
LINC01006-204ENST00000435354 ATF5Q9Y2D1 282 aaPredicted RBP19.92■□□□□ 0.78
LINC01006-204ENST00000435354 LY75O60449 1722 aa19.92■□□□□ 0.78
LINC01006-204ENST00000435354 MAP2P11137 1827 aaKnown RBP19.91■□□□□ 0.78
LINC01006-204ENST00000435354 CCER1Q8TC90 406 aaPredicted RBP19.91■□□□□ 0.78
LINC01006-204ENST00000435354 SYTL4Q96C24 671 aaPredicted RBP19.91■□□□□ 0.78
LINC01006-204ENST00000435354 HSPA5P11021 654 aaKnown RBP19.9■□□□□ 0.78
LINC01006-204ENST00000435354 SLC27A3Q5K4L6 730 aa19.9■□□□□ 0.78
LINC01006-204ENST00000435354 NCAPD2Q15021 1401 aa19.9■□□□□ 0.78
LINC01006-204ENST00000435354 TATP17735 454 aaPredicted RBP19.89■□□□□ 0.77
LINC01006-204ENST00000435354 EIF4G2P78344 907 aaKnown RBP eCLIP19.89■□□□□ 0.77
LINC01006-204ENST00000435354 AKT1S1Q96B36 256 aa19.89■□□□□ 0.77
LINC01006-204ENST00000435354 SGIP1Q9BQI5 828 aa19.89■□□□□ 0.77
LINC01006-204ENST00000435354 POLR3GLQ9BT43 218 aa19.89■□□□□ 0.77
LINC01006-204ENST00000435354 MTFR1LQ9H019 292 aa19.89■□□□□ 0.77
LINC01006-204ENST00000435354 TUBGCP6Q96RT7 1819 aa19.88■□□□□ 0.77
LINC01006-204ENST00000435354 QSER1Q2KHR3 1735 aa19.88■□□□□ 0.77
LINC01006-204ENST00000435354 PKD1L3Q7Z443 1732 aa19.88■□□□□ 0.77
LINC01006-204ENST00000435354 KCNQ4P56696 695 aa19.88■□□□□ 0.77
LINC01006-204ENST00000435354 PPM1GO15355 546 aaPredicted RBP19.87■□□□□ 0.77
LINC01006-204ENST00000435354 WASHC2AQ641Q2 1341 aa19.86■□□□□ 0.77
LINC01006-204ENST00000435354 PCDH11XQ9BZA7 1347 aa19.86■□□□□ 0.77
LINC01006-204ENST00000435354 PCDH11YQ9BZA8 1340 aa19.86■□□□□ 0.77
LINC01006-204ENST00000435354 POLKQ9UBT6 870 aa19.86■□□□□ 0.77
LINC01006-204ENST00000435354 TOGARAM1Q9Y4F4 1720 aa19.85■□□□□ 0.77
LINC01006-204ENST00000435354 CYP27B1O15528 508 aa19.85■□□□□ 0.77
LINC01006-204ENST00000435354 PNPLA7Q6ZV29 1317 aa19.83■□□□□ 0.77
LINC01006-204ENST00000435354 ITGB4P16144 1822 aa19.82■□□□□ 0.76
LINC01006-204ENST00000435354 EYA1Q99502 592 aa19.82■□□□□ 0.76
LINC01006-204ENST00000435354 FHDC1Q9C0D6 1143 aaPredicted RBP19.82■□□□□ 0.76
LINC01006-204ENST00000435354 PANK3Q9H999 370 aa19.82■□□□□ 0.76
LINC01006-204ENST00000435354 CCNL1Q9UK58 526 aaPredicted RBP19.82■□□□□ 0.76
LINC01006-204ENST00000435354 COL24A1Q17RW2 1714 aa19.82■□□□□ 0.76
LINC01006-204ENST00000435354 TNNT2P45379 298 aaPredicted RBP19.81■□□□□ 0.76
LINC01006-204ENST00000435354 SYT17Q9BSW7 474 aa19.8■□□□□ 0.76
LINC01006-204ENST00000435354 ARXQ96QS3 562 aa19.79■□□□□ 0.76
LINC01006-204ENST00000435354 TFCP2L1Q9NZI6 479 aa19.79■□□□□ 0.76
LINC01006-204ENST00000435354 C5P01031 1676 aa19.78■□□□□ 0.76
LINC01006-204ENST00000435354 EIF4A2Q14240 407 aaKnown RBP19.78■□□□□ 0.76
LINC01006-204ENST00000435354 SLC16A10Q8TF71 515 aa19.78■□□□□ 0.76
LINC01006-204ENST00000435354 TAF1LQ8IZX4 1826 aa19.78■□□□□ 0.76
LINC01006-204ENST00000435354 NKX1-1Q15270 411 aaPredicted RBP19.77■□□□□ 0.76
LINC01006-204ENST00000435354 MPRIPQ6WCQ1 1025 aa19.77■□□□□ 0.76
LINC01006-204ENST00000435354 PALLDQ8WX93 1383 aa19.77■□□□□ 0.76
LINC01006-204ENST00000435354 MAP3K5Q99683 1374 aa19.76■□□□□ 0.75
LINC01006-204ENST00000435354 DCAF8L1A6NGE4 600 aa19.76■□□□□ 0.75
LINC01006-204ENST00000435354 YY1P25490 414 aa19.76■□□□□ 0.75
LINC01006-204ENST00000435354 SPG7Q9UQ90 795 aa19.76■□□□□ 0.75
LINC01006-204ENST00000435354 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.75■□□□□ 0.75
LINC01006-204ENST00000435354 PIGBQ92521 554 aa19.74■□□□□ 0.75
LINC01006-204ENST00000435354 COL23A1Q86Y22 540 aaPredicted RBP19.73■□□□□ 0.75
LINC01006-204ENST00000435354 IGSF1Q8N6C5 1336 aa19.73■□□□□ 0.75
LINC01006-204ENST00000435354 PHKG2P15735 406 aa19.71■□□□□ 0.75
LINC01006-204ENST00000435354 SMARCC1Q92922 1105 aaPredicted RBP19.71■□□□□ 0.75
LINC01006-204ENST00000435354 C4BP0C0L5 1744 aa19.71■□□□□ 0.75
LINC01006-204ENST00000435354 MORC1Q86VD1 984 aa19.7■□□□□ 0.74
LINC01006-204ENST00000435354 PLEKHG2Q9H7P9 1386 aa19.7■□□□□ 0.74
LINC01006-204ENST00000435354 POLD1P28340 1107 aa19.69■□□□□ 0.74
LINC01006-204ENST00000435354 IFNL2Q8IZJ0 200 aa19.69■□□□□ 0.74
LINC01006-204ENST00000435354 KIF7Q2M1P5 1343 aa19.69■□□□□ 0.74
LINC01006-204ENST00000435354 UTRNP46939 3433 aa19.69■□□□□ 0.74
LINC01006-204ENST00000435354 MSH5O43196 834 aa19.68■□□□□ 0.74
LINC01006-204ENST00000435354 UBR3Q6ZT12 1888 aa19.67■□□□□ 0.74
LINC01006-204ENST00000435354 AMIGO3Q86WK7 504 aa19.67■□□□□ 0.74
LINC01006-204ENST00000435354 TMOD3Q9NYL9 352 aa19.67■□□□□ 0.74
LINC01006-204ENST00000435354 KNSTRNQ9Y448 316 aa19.67■□□□□ 0.74
LINC01006-204ENST00000435354 AMER1Q5JTC6 1135 aaPredicted RBP19.66■□□□□ 0.74
LINC01006-204ENST00000435354 MSL1Q68DK7 614 aa19.66■□□□□ 0.74
LINC01006-204ENST00000435354 ASAP1Q9ULH1 1129 aa19.66■□□□□ 0.74
LINC01006-204ENST00000435354 LOC102724428A0A0B4J2F2 783 aa19.65■□□□□ 0.74
LINC01006-204ENST00000435354 SIK1P57059 783 aa19.65■□□□□ 0.74
LINC01006-204ENST00000435354 AEBP1Q8IUX7 1158 aa19.65■□□□□ 0.74
LINC01006-204ENST00000435354 KLHL34Q8N239 644 aa19.65■□□□□ 0.74
LINC01006-204ENST00000435354 CHD4Q14839 1912 aa19.64■□□□□ 0.74
LINC01006-204ENST00000435354 NLGN2Q8NFZ4 835 aa19.64■□□□□ 0.73
LINC01006-204ENST00000435354 HMGB2P26583 209 aaKnown RBP19.63■□□□□ 0.73
LINC01006-204ENST00000435354 SMIM5Q71RC9 77 aa19.63■□□□□ 0.73
LINC01006-204ENST00000435354 LINC00116Q8NCU8 138 aa19.63■□□□□ 0.73
LINC01006-204ENST00000435354 FLAD1Q8NFF5 587 aa19.63■□□□□ 0.73
LINC01006-204ENST00000435354 AK7Q96M32 723 aa19.63■□□□□ 0.73
LINC01006-204ENST00000435354 ATG3Q9NT62 314 aa19.63■□□□□ 0.73
LINC01006-204ENST00000435354 KDM6AO15550 1401 aaPredicted RBP19.62■□□□□ 0.73
LINC01006-204ENST00000435354 ITPK1Q13572 414 aa19.62■□□□□ 0.73
LINC01006-204ENST00000435354 IL13P35225 146 aa19.61■□□□□ 0.73
LINC01006-204ENST00000435354 PLEKHO1Q53GL0 409 aaPredicted RBP19.61■□□□□ 0.73
LINC01006-204ENST00000435354 ZNF530Q6P9A1 599 aaPredicted RBP19.61■□□□□ 0.73
LINC01006-204ENST00000435354 KDRP35968 1356 aa19.6■□□□□ 0.73
LINC01006-204ENST00000435354 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms