RNA–Protein interactions for RNA: ENST00000435305.1

PTPA-219, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 2 BASIC

Gene PTPA, Length 530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-219ENST00000435305 NBPF4Q96M43 638 aa17.39■□□□□ 0.37
PTPA-219ENST00000435305 SPON1Q9HCB6 807 aa17.38■□□□□ 0.37
PTPA-219ENST00000435305 BTAF1O14981 1849 aa17.37■□□□□ 0.37
PTPA-219ENST00000435305 USHBP1Q8N6Y0 703 aa17.37■□□□□ 0.37
PTPA-219ENST00000435305 PANK3Q9H999 370 aa17.37■□□□□ 0.37
PTPA-219ENST00000435305 PPP1R1BQ9UD71 204 aaPredicted RBP17.37■□□□□ 0.37
PTPA-219ENST00000435305 EMILIN1Q9Y6C2 1016 aa17.37■□□□□ 0.37
PTPA-219ENST00000435305 PROM2Q8N271 834 aa17.36■□□□□ 0.37
PTPA-219ENST00000435305 ANKRD26Q9UPS8 1709 aa17.35■□□□□ 0.37
PTPA-219ENST00000435305 TNNT2P45379 298 aaPredicted RBP17.35■□□□□ 0.37
PTPA-219ENST00000435305 KNSTRNQ9Y448 316 aa17.34■□□□□ 0.37
PTPA-219ENST00000435305 MEGF6O75095 1541 aa17.33■□□□□ 0.37
PTPA-219ENST00000435305 WASHC2AQ641Q2 1341 aa17.33■□□□□ 0.36
PTPA-219ENST00000435305 PCDH11XQ9BZA7 1347 aa17.33■□□□□ 0.36
PTPA-219ENST00000435305 PCDH11YQ9BZA8 1340 aa17.33■□□□□ 0.36
PTPA-219ENST00000435305 PRIM1P49642 420 aaKnown RBP17.33■□□□□ 0.36
PTPA-219ENST00000435305 SLC15A2Q16348 729 aa17.33■□□□□ 0.36
PTPA-219ENST00000435305 ANO8Q9HCE9 1232 aaPredicted RBP17.32■□□□□ 0.36
PTPA-219ENST00000435305 DOT1LQ8TEK3 1739 aa17.32■□□□□ 0.36
PTPA-219ENST00000435305 NSD2O96028 1365 aa17.31■□□□□ 0.36
PTPA-219ENST00000435305 HMGB2P26583 209 aaKnown RBP17.31■□□□□ 0.36
PTPA-219ENST00000435305 SLC27A3Q5K4L6 730 aa17.31■□□□□ 0.36
PTPA-219ENST00000435305 POLKQ9UBT6 870 aa17.31■□□□□ 0.36
PTPA-219ENST00000435305 SPG7Q9UQ90 795 aa17.31■□□□□ 0.36
PTPA-219ENST00000435305 SRCAPQ6ZRS2 3230 aa17.3■□□□□ 0.36
PTPA-219ENST00000435305 SHANK3Q9BYB0 1731 aa17.3■□□□□ 0.36
PTPA-219ENST00000435305 DCAF8L1A6NGE4 600 aa17.3■□□□□ 0.36
PTPA-219ENST00000435305 MORC1Q86VD1 984 aa17.3■□□□□ 0.36
PTPA-219ENST00000435305 EYA1Q99502 592 aa17.27■□□□□ 0.36
PTPA-219ENST00000435305 ZBTB7AO95365 584 aa17.26■□□□□ 0.35
PTPA-219ENST00000435305 CASZ1Q86V15 1759 aa17.25■□□□□ 0.35
PTPA-219ENST00000435305 ATF5Q9Y2D1 282 aaPredicted RBP17.25■□□□□ 0.35
PTPA-219ENST00000435305 EIF4A2Q14240 407 aaKnown RBP17.24■□□□□ 0.35
PTPA-219ENST00000435305 DIEXFQ68CQ4 756 aaKnown RBP17.24■□□□□ 0.35
PTPA-219ENST00000435305 MPRIPQ6WCQ1 1025 aa17.24■□□□□ 0.35
PTPA-219ENST00000435305 MTFR1LQ9H019 292 aa17.24■□□□□ 0.35
PTPA-219ENST00000435305 LRRC4BQ9NT99 713 aa17.24■□□□□ 0.35
PTPA-219ENST00000435305 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.24■□□□□ 0.35
PTPA-219ENST00000435305 TFCP2L1Q9NZI6 479 aa17.24■□□□□ 0.35
PTPA-219ENST00000435305 CCNL1Q9UK58 526 aaPredicted RBP17.24■□□□□ 0.35
PTPA-219ENST00000435305 LY75O60449 1722 aa17.24■□□□□ 0.35
PTPA-219ENST00000435305 KIF7Q2M1P5 1343 aa17.23■□□□□ 0.35
PTPA-219ENST00000435305 PKD1L3Q7Z443 1732 aa17.23■□□□□ 0.35
PTPA-219ENST00000435305 ITGB4P16144 1822 aa17.22■□□□□ 0.35
PTPA-219ENST00000435305 CYP27B1O15528 508 aa17.22■□□□□ 0.35
PTPA-219ENST00000435305 IFNL2Q8IZJ0 200 aa17.22■□□□□ 0.35
PTPA-219ENST00000435305 SMARCC1Q92922 1105 aaPredicted RBP17.22■□□□□ 0.35
PTPA-219ENST00000435305 PDGFDQ9GZP0 370 aaPredicted RBP17.22■□□□□ 0.35
PTPA-219ENST00000435305 NCAPD2Q15021 1401 aa17.21■□□□□ 0.34
PTPA-219ENST00000435305 ZNF827Q17R98 1081 aa17.2■□□□□ 0.34
PTPA-219ENST00000435305 SLC16A10Q8TF71 515 aa17.2■□□□□ 0.34
PTPA-219ENST00000435305 PAPPAQ13219 1627 aa17.2■□□□□ 0.34
PTPA-219ENST00000435305 MSH5O43196 834 aa17.19■□□□□ 0.34
PTPA-219ENST00000435305 KCNQ4P56696 695 aa17.19■□□□□ 0.34
PTPA-219ENST00000435305 NKX1-1Q15270 411 aaPredicted RBP17.19■□□□□ 0.34
PTPA-219ENST00000435305 PLEKHO1Q53GL0 409 aaPredicted RBP17.19■□□□□ 0.34
PTPA-219ENST00000435305 AKT1S1Q96B36 256 aa17.19■□□□□ 0.34
PTPA-219ENST00000435305 QSER1Q2KHR3 1735 aa17.18■□□□□ 0.34
PTPA-219ENST00000435305 PLEKHG2Q9H7P9 1386 aa17.18■□□□□ 0.34
PTPA-219ENST00000435305 HSP90AB1P08238 724 aaKnown RBP17.18■□□□□ 0.34
PTPA-219ENST00000435305 POLD1P28340 1107 aa17.18■□□□□ 0.34
PTPA-219ENST00000435305 TMOD3Q9NYL9 352 aa17.18■□□□□ 0.34
PTPA-219ENST00000435305 IGSF1Q8N6C5 1336 aa17.18■□□□□ 0.34
PTPA-219ENST00000435305 PHKG2P15735 406 aa17.17■□□□□ 0.34
PTPA-219ENST00000435305 AMOTQ4VCS5 1084 aa17.17■□□□□ 0.34
PTPA-219ENST00000435305 PALLDQ8WX93 1383 aa17.16■□□□□ 0.34
PTPA-219ENST00000435305 PTGER2P43116 358 aa17.16■□□□□ 0.34
PTPA-219ENST00000435305 DDX10Q13206 875 aaKnown RBP17.16■□□□□ 0.34
PTPA-219ENST00000435305 AMER1Q5JTC6 1135 aaPredicted RBP17.16■□□□□ 0.34
PTPA-219ENST00000435305 CC2D1BQ5T0F9 858 aaKnown RBP17.16■□□□□ 0.34
PTPA-219ENST00000435305 ARXQ96QS3 562 aa17.15■□□□□ 0.34
PTPA-219ENST00000435305 C5P01031 1676 aa17.14■□□□□ 0.33
PTPA-219ENST00000435305 TOGARAM1Q9Y4F4 1720 aa17.14■□□□□ 0.33
PTPA-219ENST00000435305 C1orf141Q5JVX7 400 aa17.14■□□□□ 0.33
PTPA-219ENST00000435305 FLAD1Q8NFF5 587 aa17.14■□□□□ 0.33
PTPA-219ENST00000435305 PIGBQ92521 554 aa17.14■□□□□ 0.33
PTPA-219ENST00000435305 PNPLA7Q6ZV29 1317 aa17.14■□□□□ 0.33
PTPA-219ENST00000435305 TAF1LQ8IZX4 1826 aa17.13■□□□□ 0.33
PTPA-219ENST00000435305 TUBGCP6Q96RT7 1819 aa17.13■□□□□ 0.33
PTPA-219ENST00000435305 MTHFSP49914 203 aa17.13■□□□□ 0.33
PTPA-219ENST00000435305 SULT6B1Q6IMI4 303 aa17.13■□□□□ 0.33
PTPA-219ENST00000435305 ZNF530Q6P9A1 599 aaPredicted RBP17.13■□□□□ 0.33
PTPA-219ENST00000435305 PER1O15534 1290 aaPredicted RBP17.12■□□□□ 0.33
PTPA-219ENST00000435305 CNGB1Q14028 1251 aaPredicted RBP17.12■□□□□ 0.33
PTPA-219ENST00000435305 DCAF5Q96JK2 942 aa17.12■□□□□ 0.33
PTPA-219ENST00000435305 AK7Q96M32 723 aa17.12■□□□□ 0.33
PTPA-219ENST00000435305 FHDC1Q9C0D6 1143 aaPredicted RBP17.12■□□□□ 0.33
PTPA-219ENST00000435305 ERVV-2B6SEH9 535 aa17.11■□□□□ 0.33
PTPA-219ENST00000435305 SYT17Q9BSW7 474 aa17.11■□□□□ 0.33
PTPA-219ENST00000435305 IL13P35225 146 aa17.1■□□□□ 0.33
PTPA-219ENST00000435305 CABP4P57796 275 aa17.1■□□□□ 0.33
PTPA-219ENST00000435305 KLHL34Q8N239 644 aa17.1■□□□□ 0.33
PTPA-219ENST00000435305 SGIP1Q9BQI5 828 aa17.1■□□□□ 0.33
PTPA-219ENST00000435305 LOC102724428A0A0B4J2F2 783 aa17.09■□□□□ 0.33
PTPA-219ENST00000435305 DIAPH1O60610 1272 aaKnown RBP17.09■□□□□ 0.33
PTPA-219ENST00000435305 ATP6V1AP38606 617 aa17.09■□□□□ 0.33
PTPA-219ENST00000435305 SIK1P57059 783 aa17.09■□□□□ 0.33
PTPA-219ENST00000435305 COL23A1Q86Y22 540 aaPredicted RBP17.08■□□□□ 0.32
PTPA-219ENST00000435305 AEBP1Q8IUX7 1158 aa17.08■□□□□ 0.32
PTPA-219ENST00000435305 ASAP1Q9ULH1 1129 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms