RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 U2AF2P26368 475 aaKnown RBP eCLIP8.87□□□□□ -0.99
GARNL3-205ENST00000435213 CCDC91Q7Z6B0 441 aa8.87□□□□□ -0.99
GARNL3-205ENST00000435213 KIF13AQ9H1H9 1805 aa8.87□□□□□ -0.99
GARNL3-205ENST00000435213 ADGRB2O60241 1585 aa8.86□□□□□ -0.99
GARNL3-205ENST00000435213 ADGRL1O94910 1474 aa8.86□□□□□ -0.99
GARNL3-205ENST00000435213 KIF1BO60333 1816 aa8.86□□□□□ -0.99
GARNL3-205ENST00000435213 GOLGA6L22H0YM25 854 aa8.86□□□□□ -0.99
GARNL3-205ENST00000435213 PPP1R12AO14974 1030 aaPredicted RBP8.86□□□□□ -0.99
GARNL3-205ENST00000435213 KIAA2012Q0VF49 1180 aa8.86□□□□□ -0.99
GARNL3-205ENST00000435213 GAS2L3Q86XJ1 694 aa8.86□□□□□ -0.99
GARNL3-205ENST00000435213 WDR63Q8IWG1 891 aa8.86□□□□□ -0.99
GARNL3-205ENST00000435213 ZNF513Q8N8E2 541 aaPredicted RBP8.86□□□□□ -0.99
GARNL3-205ENST00000435213 PHF23Q9BUL5 403 aaPredicted RBP8.86□□□□□ -0.99
GARNL3-205ENST00000435213 C22orf23Q9BZE7 217 aa8.86□□□□□ -0.99
GARNL3-205ENST00000435213 KIF3CO14782 793 aa8.86□□□□□ -0.99
GARNL3-205ENST00000435213 CALR3Q96L12 384 aaKnown RBP8.86□□□□□ -0.99
GARNL3-205ENST00000435213 HSCBQ8IWL3 235 aa8.86□□□□□ -0.99
GARNL3-205ENST00000435213 ITFG2Q969R8 447 aa8.86□□□□□ -0.99
GARNL3-205ENST00000435213 RUNDC1Q96C34 613 aa8.86□□□□□ -0.99
GARNL3-205ENST00000435213 DEF6Q9H4E7 631 aa8.86□□□□□ -0.99
GARNL3-205ENST00000435213 SBNO2Q9Y2G9 1366 aa8.85□□□□□ -0.99
GARNL3-205ENST00000435213 CCDC27Q2M243 656 aa8.85□□□□□ -0.99
GARNL3-205ENST00000435213 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.85□□□□□ -0.99
GARNL3-205ENST00000435213 CIZ1Q9ULV3 898 aaPredicted RBP8.85□□□□□ -0.99
GARNL3-205ENST00000435213 SUFUQ9UMX1 484 aa8.85□□□□□ -0.99
GARNL3-205ENST00000435213 LIG1P18858 919 aa8.84□□□□□ -0.99
GARNL3-205ENST00000435213 CASQ1P31415 396 aa8.84□□□□□ -0.99
GARNL3-205ENST00000435213 FAM210AQ96ND0 272 aa8.84□□□□□ -0.99
GARNL3-205ENST00000435213 TRERF1Q96PN7 1200 aa8.84□□□□□ -0.99
GARNL3-205ENST00000435213 ZNF692Q9BU19 519 aaPredicted RBP8.84□□□□□ -0.99
GARNL3-205ENST00000435213 NBPF3Q9H094 633 aa8.84□□□□□ -0.99
GARNL3-205ENST00000435213 BCL2L12Q9HB09 334 aa8.84□□□□□ -0.99
GARNL3-205ENST00000435213 GBP4Q96PP9 640 aa8.84□□□□□ -0.99
GARNL3-205ENST00000435213 CXorf56Q9H5V9 222 aa8.84□□□□□ -0.99
GARNL3-205ENST00000435213 ERICH4A6NGS2 130 aa8.84□□□□□ -0.99
GARNL3-205ENST00000435213 RLBP1P12271 317 aa8.84□□□□□ -0.99
GARNL3-205ENST00000435213 DDIT3P35638 169 aa8.84□□□□□ -0.99
GARNL3-205ENST00000435213 MVPQ14764 893 aaKnown RBP8.84□□□□□ -0.99
GARNL3-205ENST00000435213 SENP3Q9H4L4 574 aaPredicted RBP8.84□□□□□ -0.99
GARNL3-205ENST00000435213 DIAPH3Q9NSV4 1193 aa8.84□□□□□ -0.99
GARNL3-205ENST00000435213 VWDEQ8N2E2 1590 aa8.84□□□□□ -0.99
GARNL3-205ENST00000435213 SETBP1Q9Y6X0 1596 aa8.84□□□□□ -0.99
GARNL3-205ENST00000435213 RAD50Q92878 1312 aa8.84□□□□□ -0.99
GARNL3-205ENST00000435213 HSP90AB1P08238 724 aaKnown RBP8.83□□□□□ -1
GARNL3-205ENST00000435213 CT47B1P0C2W7 299 aaPredicted RBP8.83□□□□□ -1
GARNL3-205ENST00000435213 CHAF1AQ13111 956 aaPredicted RBP8.83□□□□□ -1
GARNL3-205ENST00000435213 SNX21Q969T3 373 aa8.83□□□□□ -1
GARNL3-205ENST00000435213 RICTORQ6R327 1708 aa8.83□□□□□ -1
GARNL3-205ENST00000435213 RAD51AP2Q09MP3 1159 aa8.83□□□□□ -1
GARNL3-205ENST00000435213 REREQ9P2R6 1566 aa8.83□□□□□ -1
GARNL3-205ENST00000435213 QRICH2Q9H0J4 1663 aa8.83□□□□□ -1
GARNL3-205ENST00000435213 TNNT1P13805 278 aa8.83□□□□□ -1
GARNL3-205ENST00000435213 HDAC1Q13547 482 aaPredicted RBP8.83□□□□□ -1
GARNL3-205ENST00000435213 TOMM22Q9NS69 142 aa8.83□□□□□ -1
GARNL3-205ENST00000435213 ZNF518AQ6AHZ1 1483 aa8.83□□□□□ -1
GARNL3-205ENST00000435213 TRDNQ13061 729 aa8.82□□□□□ -1
GARNL3-205ENST00000435213 ANKRD7Q92527 254 aa8.82□□□□□ -1
GARNL3-205ENST00000435213 PDLIM2Q96JY6 352 aa8.82□□□□□ -1
GARNL3-205ENST00000435213 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.82□□□□□ -1
GARNL3-205ENST00000435213 DIP2BQ9P265 1576 aa8.82□□□□□ -1
GARNL3-205ENST00000435213 IBTKQ9P2D0 1353 aaPredicted RBP8.82□□□□□ -1
GARNL3-205ENST00000435213 BIRC2Q13490 618 aa8.82□□□□□ -1
GARNL3-205ENST00000435213 KRT222Q8N1A0 295 aa8.82□□□□□ -1
GARNL3-205ENST00000435213 CARD14Q9BXL6 1004 aa8.82□□□□□ -1
GARNL3-205ENST00000435213 TMX1Q9H3N1 280 aa8.82□□□□□ -1
GARNL3-205ENST00000435213 JRKLQ9Y4A0 524 aa8.82□□□□□ -1
GARNL3-205ENST00000435213 SMC5Q8IY18 1101 aa8.82□□□□□ -1
GARNL3-205ENST00000435213 NOL10Q9BSC4 688 aaKnown RBP8.82□□□□□ -1
GARNL3-205ENST00000435213 CFAP65Q6ZU64 1925 aaKnown RBP8.82□□□□□ -1
GARNL3-205ENST00000435213 ZFYVE16Q7Z3T8 1539 aa8.81□□□□□ -1
GARNL3-205ENST00000435213 NRDCO43847 1150 aa8.81□□□□□ -1
GARNL3-205ENST00000435213 ZKSCAN2Q63HK3 967 aa8.81□□□□□ -1
GARNL3-205ENST00000435213 SPRYD3Q8NCJ5 442 aa8.81□□□□□ -1
GARNL3-205ENST00000435213 NRXN1Q9ULB1 1477 aa8.81□□□□□ -1
GARNL3-205ENST00000435213 ATP6V1AP38606 617 aa8.81□□□□□ -1
GARNL3-205ENST00000435213 TSC1Q92574 1164 aa8.81□□□□□ -1
GARNL3-205ENST00000435213 MROH2AA6NES4 1674 aa8.81□□□□□ -1
GARNL3-205ENST00000435213 H0YHG0 523 aa8.81□□□□□ -1
GARNL3-205ENST00000435213 HNRNPH2P55795 449 aaKnown RBP8.81□□□□□ -1
GARNL3-205ENST00000435213 SARNPP82979 210 aaKnown RBP8.81□□□□□ -1
GARNL3-205ENST00000435213 NOM1Q5C9Z4 860 aaKnown RBP8.81□□□□□ -1
GARNL3-205ENST00000435213 TCP11L2Q8N4U5 519 aa8.81□□□□□ -1
GARNL3-205ENST00000435213 JMYQ8N9B5 988 aa8.81□□□□□ -1
GARNL3-205ENST00000435213 MORC2Q9Y6X9 1032 aaPredicted RBP8.81□□□□□ -1
GARNL3-205ENST00000435213 NSD3Q9BZ95 1437 aa8.8□□□□□ -1
GARNL3-205ENST00000435213 CCDC189A1A4V9 331 aa8.8□□□□□ -1
GARNL3-205ENST00000435213 KLHL33A6NCF5 533 aa8.8□□□□□ -1
GARNL3-205ENST00000435213 CCDC96Q2M329 555 aa8.8□□□□□ -1
GARNL3-205ENST00000435213 DZIP1LQ8IYY4 767 aaKnown RBP8.8□□□□□ -1
GARNL3-205ENST00000435213 TMTC2Q8N394 836 aa8.8□□□□□ -1
GARNL3-205ENST00000435213 DDX41Q9UJV9 622 aaKnown RBP8.8□□□□□ -1
GARNL3-205ENST00000435213 TNNQ9UQP3 1299 aa8.8□□□□□ -1
GARNL3-205ENST00000435213 FRMPD1Q5SYB0 1578 aa8.8□□□□□ -1
GARNL3-205ENST00000435213 MTA1Q13330 715 aa8.8□□□□□ -1
GARNL3-205ENST00000435213 DNAJC21Q5F1R6 531 aaKnown RBP8.8□□□□□ -1
GARNL3-205ENST00000435213 SWT1Q5T5J6 900 aaKnown RBP8.8□□□□□ -1
GARNL3-205ENST00000435213 PLCH2O75038 1416 aa8.8□□□□□ -1
GARNL3-205ENST00000435213 RAB3GAP1Q15042 981 aa8.79□□□□□ -1
GARNL3-205ENST00000435213 HSP90AB4PQ58FF6 505 aa8.79□□□□□ -1
GARNL3-205ENST00000435213 A0A1B0GUL7 405 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms