RNA–Protein interactions for RNA: ENST00000435197.2

SMG1P3-201, Transcript of SMG1 pseudogene 3, humanhuman

TSL 3

Gene SMG1P3, Length 416 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-201ENST00000435197 A0A1W2PP64 1363 aa25.63■■□□□ 1.69
SMG1P3-201ENST00000435197 ANKRD36BQ8N2N9 1353 aa25.63■■□□□ 1.69
SMG1P3-201ENST00000435197 NSD2O96028 1365 aa25.62■■□□□ 1.69
SMG1P3-201ENST00000435197 SLC12A5Q9H2X9 1139 aa25.62■■□□□ 1.69
SMG1P3-201ENST00000435197 NEUROD1Q13562 356 aa25.61■■□□□ 1.69
SMG1P3-201ENST00000435197 SYTL4Q96C24 671 aaPredicted RBP25.61■■□□□ 1.69
SMG1P3-201ENST00000435197 LTV1Q96GA3 475 aaPredicted RBP25.61■■□□□ 1.69
SMG1P3-201ENST00000435197 PRIM1P49642 420 aaKnown RBP25.59■■□□□ 1.69
SMG1P3-201ENST00000435197 TERF2IPQ9NYB0 399 aa25.59■■□□□ 1.69
SMG1P3-201ENST00000435197 MEGF6O75095 1541 aa25.57■■□□□ 1.68
SMG1P3-201ENST00000435197 CARD11Q9BXL7 1154 aa25.56■■□□□ 1.68
SMG1P3-201ENST00000435197 C5P01031 1676 aa25.55■■□□□ 1.68
SMG1P3-201ENST00000435197 YBX3P16989 372 aaKnown RBP eCLIP25.55■■□□□ 1.68
SMG1P3-201ENST00000435197 CCNL1Q9UK58 526 aaPredicted RBP25.55■■□□□ 1.68
SMG1P3-201ENST00000435197 GRIN3BO60391 1043 aa25.53■■□□□ 1.68
SMG1P3-201ENST00000435197 MAP3K19Q56UN5 1328 aa25.53■■□□□ 1.68
SMG1P3-201ENST00000435197 HOXC9P31274 260 aa25.52■■□□□ 1.68
SMG1P3-201ENST00000435197 ZCRB1Q8TBF4 217 aaKnown RBP25.52■■□□□ 1.68
SMG1P3-201ENST00000435197 COL23A1Q86Y22 540 aaPredicted RBP25.51■■□□□ 1.67
SMG1P3-201ENST00000435197 PUS7Q96PZ0 661 aaKnown RBP25.51■■□□□ 1.67
SMG1P3-201ENST00000435197 TAF1LQ8IZX4 1826 aa25.51■■□□□ 1.67
SMG1P3-201ENST00000435197 MSH5O43196 834 aa25.5■■□□□ 1.67
SMG1P3-201ENST00000435197 IFFO2Q5TF58 517 aa25.5■■□□□ 1.67
SMG1P3-201ENST00000435197 USP47Q96K76 1375 aa25.5■■□□□ 1.67
SMG1P3-201ENST00000435197 AMPHP49418 695 aa25.49■■□□□ 1.67
SMG1P3-201ENST00000435197 COG3Q96JB2 828 aa25.49■■□□□ 1.67
SMG1P3-201ENST00000435197 ATP10DQ9P241 1426 aa25.48■■□□□ 1.67
SMG1P3-201ENST00000435197 MSL1Q68DK7 614 aa25.47■■□□□ 1.67
SMG1P3-201ENST00000435197 RTL1A6NKG5 1358 aa25.46■■□□□ 1.67
SMG1P3-201ENST00000435197 FBLN1P23142 703 aa25.46■■□□□ 1.67
SMG1P3-201ENST00000435197 CGNL1Q0VF96 1302 aa25.42■■□□□ 1.66
SMG1P3-201ENST00000435197 GOLGB1Q14789 3259 aaKnown RBP25.42■■□□□ 1.66
SMG1P3-201ENST00000435197 NBPF6Q5VWK0 638 aa25.42■■□□□ 1.66
SMG1P3-201ENST00000435197 NBPF4Q96M43 638 aa25.42■■□□□ 1.66
SMG1P3-201ENST00000435197 CD2APQ9Y5K6 639 aa25.42■■□□□ 1.66
SMG1P3-201ENST00000435197 TOGARAM1Q9Y4F4 1720 aa25.41■■□□□ 1.66
SMG1P3-201ENST00000435197 ITGB4P16144 1822 aa25.41■■□□□ 1.66
SMG1P3-201ENST00000435197 C4BP0C0L5 1744 aa25.4■■□□□ 1.66
SMG1P3-201ENST00000435197 USHBP1Q8N6Y0 703 aa25.4■■□□□ 1.66
SMG1P3-201ENST00000435197 ADCY9O60503 1353 aa25.4■■□□□ 1.66
SMG1P3-201ENST00000435197 SMG6Q86US8 1419 aaKnown RBP25.39■■□□□ 1.66
SMG1P3-201ENST00000435197 RAPGEF4Q8WZA2 1011 aa25.39■■□□□ 1.66
SMG1P3-201ENST00000435197 PALLDQ8WX93 1383 aa25.39■■□□□ 1.65
SMG1P3-201ENST00000435197 UBR3Q6ZT12 1888 aa25.38■■□□□ 1.65
SMG1P3-201ENST00000435197 RRS1Q15050 365 aaKnown RBP25.38■■□□□ 1.65
SMG1P3-201ENST00000435197 FLAD1Q8NFF5 587 aa25.38■■□□□ 1.65
SMG1P3-201ENST00000435197 TESK2Q96S53 571 aa25.38■■□□□ 1.65
SMG1P3-201ENST00000435197 TIMELESSQ9UNS1 1208 aa25.38■■□□□ 1.65
SMG1P3-201ENST00000435197 GPBP1L1Q9HC44 474 aaPredicted RBP25.37■■□□□ 1.65
SMG1P3-201ENST00000435197 KIF20BQ96Q89 1820 aa25.36■■□□□ 1.65
SMG1P3-201ENST00000435197 PCDH11XQ9BZA7 1347 aa25.36■■□□□ 1.65
SMG1P3-201ENST00000435197 PCDH11YQ9BZA8 1340 aa25.36■■□□□ 1.65
SMG1P3-201ENST00000435197 PKD1L3Q7Z443 1732 aa25.35■■□□□ 1.65
SMG1P3-201ENST00000435197 TONSLQ96HA7 1378 aa25.35■■□□□ 1.65
SMG1P3-201ENST00000435197 TATP17735 454 aaPredicted RBP25.35■■□□□ 1.65
SMG1P3-201ENST00000435197 HMGB2P26583 209 aaKnown RBP25.35■■□□□ 1.65
SMG1P3-201ENST00000435197 ST20-MTHFSA0A0A6YYL1 179 aa25.32■■□□□ 1.64
SMG1P3-201ENST00000435197 INSRP06213 1382 aa25.31■■□□□ 1.64
SMG1P3-201ENST00000435197 HSPA6P17066 643 aa25.31■■□□□ 1.64
SMG1P3-201ENST00000435197 MPRIPQ6WCQ1 1025 aa25.31■■□□□ 1.64
SMG1P3-201ENST00000435197 ZNF526Q8TF50 670 aaPredicted RBP25.31■■□□□ 1.64
SMG1P3-201ENST00000435197 GGNBP2Q9H3C7 697 aa25.31■■□□□ 1.64
SMG1P3-201ENST00000435197 MAP2P11137 1827 aaKnown RBP25.3■■□□□ 1.64
SMG1P3-201ENST00000435197 FYB1O15117 783 aa25.3■■□□□ 1.64
SMG1P3-201ENST00000435197 CEP350Q5VT06 3117 aa25.3■■□□□ 1.64
SMG1P3-201ENST00000435197 AMIGO3Q86WK7 504 aa25.29■■□□□ 1.64
SMG1P3-201ENST00000435197 AK7Q96M32 723 aa25.29■■□□□ 1.64
SMG1P3-201ENST00000435197 IGSF1Q8N6C5 1336 aa25.29■■□□□ 1.64
SMG1P3-201ENST00000435197 FLT4P35916 1363 aa25.29■■□□□ 1.64
SMG1P3-201ENST00000435197 NSD3Q9BZ95 1437 aa25.29■■□□□ 1.64
SMG1P3-201ENST00000435197 CYP27B1O15528 508 aa25.28■■□□□ 1.64
SMG1P3-201ENST00000435197 HSP90AB2PQ58FF8 381 aa25.28■■□□□ 1.64
SMG1P3-201ENST00000435197 SMARCC1Q92922 1105 aaPredicted RBP25.28■■□□□ 1.64
SMG1P3-201ENST00000435197 SLC24A1O60721 1099 aa25.27■■□□□ 1.64
SMG1P3-201ENST00000435197 CICQ96RK0 1608 aaPredicted RBP25.26■■□□□ 1.63
SMG1P3-201ENST00000435197 PHF14O94880 888 aa25.26■■□□□ 1.63
SMG1P3-201ENST00000435197 KIF24Q5T7B8 1368 aa25.26■■□□□ 1.63
SMG1P3-201ENST00000435197 WWC3Q9ULE0 1092 aa25.25■■□□□ 1.63
SMG1P3-201ENST00000435197 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.24■■□□□ 1.63
SMG1P3-201ENST00000435197 SMIM5Q71RC9 77 aa25.24■■□□□ 1.63
SMG1P3-201ENST00000435197 NCAPD2Q15021 1401 aa25.22■■□□□ 1.63
SMG1P3-201ENST00000435197 KIF13BQ9NQT8 1826 aa25.22■■□□□ 1.63
SMG1P3-201ENST00000435197 SSFA2P28290 1259 aa25.22■■□□□ 1.63
SMG1P3-201ENST00000435197 PIGBQ92521 554 aa25.22■■□□□ 1.63
SMG1P3-201ENST00000435197 ANKRD26Q9UPS8 1709 aa25.22■■□□□ 1.63
SMG1P3-201ENST00000435197 KIAA1551Q9HCM1 1747 aa25.21■■□□□ 1.63
SMG1P3-201ENST00000435197 KIF3CO14782 793 aa25.19■■□□□ 1.62
SMG1P3-201ENST00000435197 NKX1-1Q15270 411 aaPredicted RBP25.19■■□□□ 1.62
SMG1P3-201ENST00000435197 LINC00116Q8NCU8 138 aa25.19■■□□□ 1.62
SMG1P3-201ENST00000435197 LOC102724428A0A0B4J2F2 783 aa25.18■■□□□ 1.62
SMG1P3-201ENST00000435197 ZEB1P37275 1124 aaPredicted RBP25.18■■□□□ 1.62
SMG1P3-201ENST00000435197 SIK1P57059 783 aa25.18■■□□□ 1.62
SMG1P3-201ENST00000435197 TMF1P82094 1093 aa25.17■■□□□ 1.62
SMG1P3-201ENST00000435197 N4BP2Q86UW6 1770 aaPredicted RBP25.17■■□□□ 1.62
SMG1P3-201ENST00000435197 EMILIN1Q9Y6C2 1016 aa25.16■■□□□ 1.62
SMG1P3-201ENST00000435197 PXDNLA1KZ92 1463 aa25.15■■□□□ 1.62
SMG1P3-201ENST00000435197 GNPATO15228 680 aa25.14■■□□□ 1.62
SMG1P3-201ENST00000435197 SPG7Q9UQ90 795 aa25.14■■□□□ 1.62
SMG1P3-201ENST00000435197 ITPK1Q13572 414 aa25.13■■□□□ 1.61
SMG1P3-201ENST00000435197 TMOD3Q9NYL9 352 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms