RNA–Protein interactions for RNA: ENST00000434658.6

FAM3A-212, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-212ENST00000434658 MYH16Q9H6N6 1097 aa23.89■■□□□ 1.42
FAM3A-212ENST00000434658 LTN1O94822 1766 aa23.88■■□□□ 1.41
FAM3A-212ENST00000434658 MAP3K19Q56UN5 1328 aa23.88■■□□□ 1.41
FAM3A-212ENST00000434658 COL5A2P05997 1499 aaPredicted RBP23.87■■□□□ 1.41
FAM3A-212ENST00000434658 RRS1Q15050 365 aaKnown RBP23.87■■□□□ 1.41
FAM3A-212ENST00000434658 LARP1Q6PKG0 1096 aaKnown RBP23.87■■□□□ 1.41
FAM3A-212ENST00000434658 SPATA31A5Q5VU36 1347 aa23.87■■□□□ 1.41
FAM3A-212ENST00000434658 SPATA31A7Q8IWB4 1347 aa23.87■■□□□ 1.41
FAM3A-212ENST00000434658 CANXP27824 592 aaKnown RBP23.87■■□□□ 1.41
FAM3A-212ENST00000434658 AMPHP49418 695 aa23.86■■□□□ 1.41
FAM3A-212ENST00000434658 ZBTB47Q9UFB7 747 aaPredicted RBP23.86■■□□□ 1.41
FAM3A-212ENST00000434658 GLI3P10071 1580 aa23.86■■□□□ 1.41
FAM3A-212ENST00000434658 IP6K1Q92551 441 aa23.85■■□□□ 1.41
FAM3A-212ENST00000434658 RGPD5Q99666 1765 aa23.85■■□□□ 1.41
FAM3A-212ENST00000434658 AAMPQ13685 434 aa23.84■■□□□ 1.41
FAM3A-212ENST00000434658 MAP2P11137 1827 aaKnown RBP23.84■■□□□ 1.41
FAM3A-212ENST00000434658 U2SURPO15042 1029 aaKnown RBP23.84■■□□□ 1.41
FAM3A-212ENST00000434658 USP35Q9P2H5 1018 aa23.84■■□□□ 1.41
FAM3A-212ENST00000434658 ABCC6O95255 1503 aa23.84■■□□□ 1.41
FAM3A-212ENST00000434658 CDK12Q9NYV4 1490 aaPredicted RBP23.84■■□□□ 1.41
FAM3A-212ENST00000434658 SPATA31A1Q5TZJ5 1347 aa23.83■■□□□ 1.41
FAM3A-212ENST00000434658 CT47B1P0C2W7 299 aaPredicted RBP23.83■■□□□ 1.41
FAM3A-212ENST00000434658 DIAPH1O60610 1272 aaKnown RBP23.82■■□□□ 1.4
FAM3A-212ENST00000434658 CSB-PGBD3P0DP91 1061 aa23.82■■□□□ 1.4
FAM3A-212ENST00000434658 TMPOP42166 694 aaKnown RBP23.82■■□□□ 1.4
FAM3A-212ENST00000434658 PANK1Q8TE04 598 aa23.82■■□□□ 1.4
FAM3A-212ENST00000434658 CLUAP1Q96AJ1 413 aa23.82■■□□□ 1.4
FAM3A-212ENST00000434658 WDR17Q8IZU2 1322 aa23.82■■□□□ 1.4
FAM3A-212ENST00000434658 MAPK8IP3Q9UPT6 1336 aa23.82■■□□□ 1.4
FAM3A-212ENST00000434658 HOXC9P31274 260 aa23.82■■□□□ 1.4
FAM3A-212ENST00000434658 TOM1L2Q6ZVM7 507 aa23.82■■□□□ 1.4
FAM3A-212ENST00000434658 RGS12O14924 1447 aa23.82■■□□□ 1.4
FAM3A-212ENST00000434658 NPM2Q86SE8 214 aaKnown RBP23.81■■□□□ 1.4
FAM3A-212ENST00000434658 PNNQ9H307 717 aaKnown RBP23.81■■□□□ 1.4
FAM3A-212ENST00000434658 IL16Q14005 1332 aa23.81■■□□□ 1.4
FAM3A-212ENST00000434658 PPM1GO15355 546 aaPredicted RBP23.8■■□□□ 1.4
FAM3A-212ENST00000434658 FAM98CQ17RN3 349 aaKnown RBP23.8■■□□□ 1.4
FAM3A-212ENST00000434658 COG6Q9Y2V7 657 aa23.8■■□□□ 1.4
FAM3A-212ENST00000434658 CRB1P82279 1406 aa23.8■■□□□ 1.4
FAM3A-212ENST00000434658 ONECUT3O60422 494 aaPredicted RBP23.8■■□□□ 1.4
FAM3A-212ENST00000434658 ANKRD24Q8TF21 1146 aa23.8■■□□□ 1.4
FAM3A-212ENST00000434658 FRAT1Q92837 279 aaPredicted RBP23.8■■□□□ 1.4
FAM3A-212ENST00000434658 EMILIN1Q9Y6C2 1016 aa23.8■■□□□ 1.4
FAM3A-212ENST00000434658 TRIM35Q9UPQ4 493 aa23.79■■□□□ 1.4
FAM3A-212ENST00000434658 ERBB3P21860 1342 aa23.78■■□□□ 1.4
FAM3A-212ENST00000434658 RTL1A6NKG5 1358 aa23.78■■□□□ 1.4
FAM3A-212ENST00000434658 FAM161AQ3B820 660 aa23.78■■□□□ 1.4
FAM3A-212ENST00000434658 LTV1Q96GA3 475 aaPredicted RBP23.78■■□□□ 1.4
FAM3A-212ENST00000434658 VIRMAQ69YN4 1812 aaKnown RBP23.78■■□□□ 1.4
FAM3A-212ENST00000434658 SEPT12Q8IYM1 358 aa23.77■■□□□ 1.4
FAM3A-212ENST00000434658 POLKQ9UBT6 870 aa23.77■■□□□ 1.4
FAM3A-212ENST00000434658 A0A0G2JS52 829 aa23.77■■□□□ 1.4
FAM3A-212ENST00000434658 IGHDP01880 384 aa23.77■■□□□ 1.4
FAM3A-212ENST00000434658 HSP90AB2PQ58FF8 381 aa23.76■■□□□ 1.39
FAM3A-212ENST00000434658 KIF24Q5T7B8 1368 aa23.76■■□□□ 1.39
FAM3A-212ENST00000434658 CARD10Q9BWT7 1032 aa23.75■■□□□ 1.39
FAM3A-212ENST00000434658 THRAP3Q9Y2W1 955 aaKnown RBP23.75■■□□□ 1.39
FAM3A-212ENST00000434658 FLT4P35916 1363 aa23.75■■□□□ 1.39
FAM3A-212ENST00000434658 BARGINQ6ZT62 677 aa23.75■■□□□ 1.39
FAM3A-212ENST00000434658 NLRP2Q9NX02 1062 aa23.75■■□□□ 1.39
FAM3A-212ENST00000434658 PEAK1Q9H792 1746 aa23.74■■□□□ 1.39
FAM3A-212ENST00000434658 FCHSD2O94868 740 aa23.74■■□□□ 1.39
FAM3A-212ENST00000434658 C8orf34Q49A92 452 aa23.74■■□□□ 1.39
FAM3A-212ENST00000434658 RLBP1P12271 317 aa23.73■■□□□ 1.39
FAM3A-212ENST00000434658 TSR2Q969E8 191 aaKnown RBP23.72■■□□□ 1.39
FAM3A-212ENST00000434658 BCL2L13Q9BXK5 485 aa23.72■■□□□ 1.39
FAM3A-212ENST00000434658 RIPK4P57078 832 aa23.71■■□□□ 1.39
FAM3A-212ENST00000434658 DDRGK1Q96HY6 314 aa23.71■■□□□ 1.39
FAM3A-212ENST00000434658 RGS3P49796 1198 aa23.7■■□□□ 1.39
FAM3A-212ENST00000434658 EXOSC9Q06265 439 aaKnown RBP23.7■■□□□ 1.38
FAM3A-212ENST00000434658 ZKSCAN2Q63HK3 967 aa23.7■■□□□ 1.38
FAM3A-212ENST00000434658 RSPH6AQ9H0K4 717 aa23.7■■□□□ 1.38
FAM3A-212ENST00000434658 TNNQ9UQP3 1299 aa23.7■■□□□ 1.38
FAM3A-212ENST00000434658 THSD7AQ9UPZ6 1657 aa23.68■■□□□ 1.38
FAM3A-212ENST00000434658 SOCS7O14512 581 aa23.67■■□□□ 1.38
FAM3A-212ENST00000434658 MVPQ14764 893 aaKnown RBP23.67■■□□□ 1.38
FAM3A-212ENST00000434658 BRWD3Q6RI45 1802 aa23.67■■□□□ 1.38
FAM3A-212ENST00000434658 KRT27Q7Z3Y8 459 aa23.66■■□□□ 1.38
FAM3A-212ENST00000434658 NBPF6Q5VWK0 638 aa23.66■■□□□ 1.38
FAM3A-212ENST00000434658 NBPF4Q96M43 638 aa23.66■■□□□ 1.38
FAM3A-212ENST00000434658 PCDHB15Q9Y5E8 787 aa23.66■■□□□ 1.38
FAM3A-212ENST00000434658 FAM208AQ9UK61 1670 aaKnown RBP23.65■■□□□ 1.38
FAM3A-212ENST00000434658 PRKAR2BP31323 418 aa23.65■■□□□ 1.38
FAM3A-212ENST00000434658 DZIP1LQ8IYY4 767 aaKnown RBP23.65■■□□□ 1.38
FAM3A-212ENST00000434658 CDCA7Q9BWT1 371 aaPredicted RBP23.65■■□□□ 1.38
FAM3A-212ENST00000434658 SMC4Q9NTJ3 1288 aa23.65■■□□□ 1.38
FAM3A-212ENST00000434658 NEFMP07197 916 aa23.63■■□□□ 1.37
FAM3A-212ENST00000434658 IL13P35225 146 aa23.63■■□□□ 1.37
FAM3A-212ENST00000434658 SSH1Q8WYL5 1049 aa23.63■■□□□ 1.37
FAM3A-212ENST00000434658 RGPD2P0DJD1 1756 aa23.63■■□□□ 1.37
FAM3A-212ENST00000434658 FTSJ3Q8IY81 847 aaKnown RBP23.62■■□□□ 1.37
FAM3A-212ENST00000434658 IL2RBP14784 551 aa23.61■■□□□ 1.37
FAM3A-212ENST00000434658 EIF4A2Q14240 407 aaKnown RBP23.61■■□□□ 1.37
FAM3A-212ENST00000434658 DDB1Q16531 1140 aa23.61■■□□□ 1.37
FAM3A-212ENST00000434658 USHBP1Q8N6Y0 703 aa23.61■■□□□ 1.37
FAM3A-212ENST00000434658 DISP2A7MBM2 1401 aa23.61■■□□□ 1.37
FAM3A-212ENST00000434658 NFE2L2Q16236 605 aa23.61■■□□□ 1.37
FAM3A-212ENST00000434658 RWDD1Q9H446 243 aaPredicted RBP23.6■■□□□ 1.37
FAM3A-212ENST00000434658 WNK3Q9BYP7 1800 aa23.6■■□□□ 1.37
FAM3A-212ENST00000434658 PARP4Q9UKK3 1724 aaKnown RBP23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms