RNA–Protein interactions for RNA: ENST00000434101.6

TRAPPC4-202, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 794 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-202ENST00000434101 DDX54Q8TDD1 881 aaKnown RBP18.05■□□□□ 0.48
TRAPPC4-202ENST00000434101 SHANK3Q9BYB0 1731 aa18.05■□□□□ 0.48
TRAPPC4-202ENST00000434101 BTAF1O14981 1849 aa18.02■□□□□ 0.48
TRAPPC4-202ENST00000434101 AMER1Q5JTC6 1135 aaPredicted RBP18.02■□□□□ 0.48
TRAPPC4-202ENST00000434101 NBPF14Q5TI25 921 aa18.02■□□□□ 0.48
TRAPPC4-202ENST00000434101 PTF1AQ7RTS3 328 aa18.02■□□□□ 0.48
TRAPPC4-202ENST00000434101 ACSBG1Q96GR2 724 aa18.02■□□□□ 0.48
TRAPPC4-202ENST00000434101 NCAPD2Q15021 1401 aa18.01■□□□□ 0.47
TRAPPC4-202ENST00000434101 PSDA5PKW4 1024 aaPredicted RBP18■□□□□ 0.47
TRAPPC4-202ENST00000434101 KCNQ2O43526 872 aa18■□□□□ 0.47
TRAPPC4-202ENST00000434101 DOT1LQ8TEK3 1739 aa18■□□□□ 0.47
TRAPPC4-202ENST00000434101 PKD1L3Q7Z443 1732 aa17.99■□□□□ 0.47
TRAPPC4-202ENST00000434101 PER1O15534 1290 aaPredicted RBP17.99■□□□□ 0.47
TRAPPC4-202ENST00000434101 R3HDM1Q15032 1099 aaKnown RBP17.99■□□□□ 0.47
TRAPPC4-202ENST00000434101 EYA1Q99502 592 aa17.99■□□□□ 0.47
TRAPPC4-202ENST00000434101 PCDH11XQ9BZA7 1347 aa17.98■□□□□ 0.47
TRAPPC4-202ENST00000434101 PCDH11YQ9BZA8 1340 aa17.98■□□□□ 0.47
TRAPPC4-202ENST00000434101 EIF4A2Q14240 407 aaKnown RBP17.98■□□□□ 0.47
TRAPPC4-202ENST00000434101 NPC1L1Q9UHC9 1359 aa17.96■□□□□ 0.47
TRAPPC4-202ENST00000434101 TXNRD1Q16881 649 aa17.95■□□□□ 0.46
TRAPPC4-202ENST00000434101 CC2D1BQ5T0F9 858 aaKnown RBP17.95■□□□□ 0.46
TRAPPC4-202ENST00000434101 SYTL4Q96C24 671 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC4-202ENST00000434101 SPG7Q9UQ90 795 aa17.95■□□□□ 0.46
TRAPPC4-202ENST00000434101 LRP5O75197 1615 aa17.94■□□□□ 0.46
TRAPPC4-202ENST00000434101 PLEKHG2Q9H7P9 1386 aa17.94■□□□□ 0.46
TRAPPC4-202ENST00000434101 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.94■□□□□ 0.46
TRAPPC4-202ENST00000434101 IGSF1Q8N6C5 1336 aa17.94■□□□□ 0.46
TRAPPC4-202ENST00000434101 PRIM1P49642 420 aaKnown RBP17.93■□□□□ 0.46
TRAPPC4-202ENST00000434101 PROM2Q8N271 834 aa17.93■□□□□ 0.46
TRAPPC4-202ENST00000434101 ITGB4P16144 1822 aa17.91■□□□□ 0.46
TRAPPC4-202ENST00000434101 CYP27B1O15528 508 aa17.91■□□□□ 0.46
TRAPPC4-202ENST00000434101 MTHFSP49914 203 aa17.9■□□□□ 0.46
TRAPPC4-202ENST00000434101 STK32BQ9NY57 414 aa17.9■□□□□ 0.46
TRAPPC4-202ENST00000434101 LY75O60449 1722 aa17.89■□□□□ 0.46
TRAPPC4-202ENST00000434101 ANO8Q9HCE9 1232 aaPredicted RBP17.89■□□□□ 0.45
TRAPPC4-202ENST00000434101 SLC27A3Q5K4L6 730 aa17.88■□□□□ 0.45
TRAPPC4-202ENST00000434101 IFNL2Q8IZJ0 200 aa17.88■□□□□ 0.45
TRAPPC4-202ENST00000434101 TOGARAM1Q9Y4F4 1720 aa17.88■□□□□ 0.45
TRAPPC4-202ENST00000434101 IL13P35225 146 aa17.87■□□□□ 0.45
TRAPPC4-202ENST00000434101 NKX1-1Q15270 411 aaPredicted RBP17.87■□□□□ 0.45
TRAPPC4-202ENST00000434101 PAPPAQ13219 1627 aa17.87■□□□□ 0.45
TRAPPC4-202ENST00000434101 CNGB1Q14028 1251 aaPredicted RBP17.86■□□□□ 0.45
TRAPPC4-202ENST00000434101 SLC15A2Q16348 729 aa17.86■□□□□ 0.45
TRAPPC4-202ENST00000434101 AMOTQ4VCS5 1084 aa17.86■□□□□ 0.45
TRAPPC4-202ENST00000434101 PLEKHO1Q53GL0 409 aaPredicted RBP17.86■□□□□ 0.45
TRAPPC4-202ENST00000434101 PHKG2P15735 406 aa17.85■□□□□ 0.45
TRAPPC4-202ENST00000434101 SULT6B1Q6IMI4 303 aa17.85■□□□□ 0.45
TRAPPC4-202ENST00000434101 CASZ1Q86V15 1759 aa17.84■□□□□ 0.45
TRAPPC4-202ENST00000434101 KDRP35968 1356 aa17.84■□□□□ 0.45
TRAPPC4-202ENST00000434101 DIAPH1O60610 1272 aaKnown RBP17.84■□□□□ 0.45
TRAPPC4-202ENST00000434101 HMGB2P26583 209 aaKnown RBP17.84■□□□□ 0.45
TRAPPC4-202ENST00000434101 MPRIPQ6WCQ1 1025 aa17.84■□□□□ 0.45
TRAPPC4-202ENST00000434101 HSP90AB1P08238 724 aaKnown RBP17.83■□□□□ 0.44
TRAPPC4-202ENST00000434101 AEBP1Q8IUX7 1158 aa17.83■□□□□ 0.44
TRAPPC4-202ENST00000434101 LRRC4BQ9NT99 713 aa17.83■□□□□ 0.44
TRAPPC4-202ENST00000434101 QSER1Q2KHR3 1735 aa17.82■□□□□ 0.44
TRAPPC4-202ENST00000434101 SMARCC1Q92922 1105 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC4-202ENST00000434101 SPON1Q9HCB6 807 aa17.82■□□□□ 0.44
TRAPPC4-202ENST00000434101 CCNL1Q9UK58 526 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC4-202ENST00000434101 ZNF530Q6P9A1 599 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC4-202ENST00000434101 TMOD3Q9NYL9 352 aa17.81■□□□□ 0.44
TRAPPC4-202ENST00000434101 PALLDQ8WX93 1383 aa17.8■□□□□ 0.44
TRAPPC4-202ENST00000434101 C1orf141Q5JVX7 400 aa17.8■□□□□ 0.44
TRAPPC4-202ENST00000434101 DCAF5Q96JK2 942 aa17.8■□□□□ 0.44
TRAPPC4-202ENST00000434101 CFAP53Q96M91 514 aa17.8■□□□□ 0.44
TRAPPC4-202ENST00000434101 TAF1LQ8IZX4 1826 aa17.79■□□□□ 0.44
TRAPPC4-202ENST00000434101 PIGBQ92521 554 aa17.79■□□□□ 0.44
TRAPPC4-202ENST00000434101 COL3A1P02461 1466 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC4-202ENST00000434101 C5P01031 1676 aa17.79■□□□□ 0.44
TRAPPC4-202ENST00000434101 SRCAPQ6ZRS2 3230 aa17.79■□□□□ 0.44
TRAPPC4-202ENST00000434101 ERVV-2B6SEH9 535 aa17.78■□□□□ 0.44
TRAPPC4-202ENST00000434101 AKT1S1Q96B36 256 aa17.78■□□□□ 0.44
TRAPPC4-202ENST00000434101 TUBGCP6Q96RT7 1819 aa17.77■□□□□ 0.44
TRAPPC4-202ENST00000434101 HMOX1P09601 288 aa17.77■□□□□ 0.44
TRAPPC4-202ENST00000434101 KCNQ4P56696 695 aa17.77■□□□□ 0.44
TRAPPC4-202ENST00000434101 ZNF827Q17R98 1081 aa17.77■□□□□ 0.44
TRAPPC4-202ENST00000434101 VIRMAQ69YN4 1812 aaKnown RBP17.77■□□□□ 0.43
TRAPPC4-202ENST00000434101 SCN11AQ9UI33 1791 aa17.76■□□□□ 0.43
TRAPPC4-202ENST00000434101 TFCP2L1Q9NZI6 479 aa17.76■□□□□ 0.43
TRAPPC4-202ENST00000434101 U2SURPO15042 1029 aaKnown RBP17.75■□□□□ 0.43
TRAPPC4-202ENST00000434101 PPP2R1AP30153 589 aa17.75■□□□□ 0.43
TRAPPC4-202ENST00000434101 ZEB1P37275 1124 aaPredicted RBP17.75■□□□□ 0.43
TRAPPC4-202ENST00000434101 PDGFDQ9GZP0 370 aaPredicted RBP17.75■□□□□ 0.43
TRAPPC4-202ENST00000434101 PPP1R1BQ9UD71 204 aaPredicted RBP17.75■□□□□ 0.43
TRAPPC4-202ENST00000434101 KDM6AO15550 1401 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC4-202ENST00000434101 ZBTB7AO95365 584 aa17.74■□□□□ 0.43
TRAPPC4-202ENST00000434101 MTFR1LQ9H019 292 aa17.74■□□□□ 0.43
TRAPPC4-202ENST00000434101 NUDCQ9Y266 331 aa17.74■□□□□ 0.43
TRAPPC4-202ENST00000434101 CABP4P57796 275 aa17.73■□□□□ 0.43
TRAPPC4-202ENST00000434101 AKAP4Q5JQC9 854 aa17.73■□□□□ 0.43
TRAPPC4-202ENST00000434101 LOC102724428A0A0B4J2F2 783 aa17.72■□□□□ 0.43
TRAPPC4-202ENST00000434101 SIK1P57059 783 aa17.72■□□□□ 0.43
TRAPPC4-202ENST00000434101 SLC16A10Q8TF71 515 aa17.72■□□□□ 0.43
TRAPPC4-202ENST00000434101 ASAP1Q9ULH1 1129 aa17.72■□□□□ 0.43
TRAPPC4-202ENST00000434101 ATF5Q9Y2D1 282 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC4-202ENST00000434101 C4BP0C0L5 1744 aa17.71■□□□□ 0.43
TRAPPC4-202ENST00000434101 PNPLA7Q6ZV29 1317 aa17.71■□□□□ 0.42
TRAPPC4-202ENST00000434101 ATG3Q9NT62 314 aa17.7■□□□□ 0.42
TRAPPC4-202ENST00000434101 ZNF831Q5JPB2 1677 aa17.7■□□□□ 0.42
TRAPPC4-202ENST00000434101 MTHFSDQ2M296 383 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms