RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 AFAP1Q8N556 730 aa10□□□□□ -0.81
COL17A1-204ENST00000433822 TMC1Q8TDI8 760 aa10□□□□□ -0.81
COL17A1-204ENST00000433822 NUDCQ9Y266 331 aa10□□□□□ -0.81
COL17A1-204ENST00000433822 PCDHB3Q9Y5E6 796 aa10□□□□□ -0.81
COL17A1-204ENST00000433822 ADGRB3O60242 1522 aa9.99□□□□□ -0.81
COL17A1-204ENST00000433822 NBPF1Q3BBV0 1214 aa9.99□□□□□ -0.81
COL17A1-204ENST00000433822 ZC3H13Q5T200 1668 aaKnown RBP9.98□□□□□ -0.81
COL17A1-204ENST00000433822 UBAP1LF5GYI3 381 aa9.97□□□□□ -0.81
COL17A1-204ENST00000433822 SLC19A1P41440 591 aa9.97□□□□□ -0.81
COL17A1-204ENST00000433822 RGL3Q3MIN7 710 aa9.97□□□□□ -0.81
COL17A1-204ENST00000433822 CFAP44Q96MT7 982 aa9.97□□□□□ -0.81
COL17A1-204ENST00000433822 BLMP54132 1417 aaPredicted RBP9.97□□□□□ -0.81
COL17A1-204ENST00000433822 ARHGAP31Q2M1Z3 1444 aa9.97□□□□□ -0.81
COL17A1-204ENST00000433822 RNF223E7ERA6 249 aa9.96□□□□□ -0.82
COL17A1-204ENST00000433822 PAXIP1Q6ZW49 1069 aaPredicted RBP9.96□□□□□ -0.82
COL17A1-204ENST00000433822 RPGRIP1LQ68CZ1 1315 aa9.96□□□□□ -0.82
COL17A1-204ENST00000433822 ABCA6Q8N139 1617 aa9.96□□□□□ -0.82
COL17A1-204ENST00000433822 KDM5AP29375 1690 aaKnown RBP9.96□□□□□ -0.82
COL17A1-204ENST00000433822 KIF3BO15066 747 aa9.95□□□□□ -0.82
COL17A1-204ENST00000433822 ZNF335Q9H4Z2 1342 aaPredicted RBP9.95□□□□□ -0.82
COL17A1-204ENST00000433822 PIK3C2GO75747 1445 aa9.95□□□□□ -0.82
COL17A1-204ENST00000433822 MYOM1P52179 1685 aa9.95□□□□□ -0.82
COL17A1-204ENST00000433822 PPLO60437 1756 aa9.94□□□□□ -0.82
COL17A1-204ENST00000433822 PIK3C2BO00750 1634 aa9.94□□□□□ -0.82
COL17A1-204ENST00000433822 ASXL1Q8IXJ9 1541 aa9.94□□□□□ -0.82
COL17A1-204ENST00000433822 HSPA1LP34931 641 aa9.94□□□□□ -0.82
COL17A1-204ENST00000433822 BLOC1S3Q6QNY0 202 aa9.94□□□□□ -0.82
COL17A1-204ENST00000433822 ZNF775Q96BV0 537 aaPredicted RBP9.94□□□□□ -0.82
COL17A1-204ENST00000433822 ABCC3O15438 1527 aa9.93□□□□□ -0.82
COL17A1-204ENST00000433822 NOS1P29475 1434 aa9.93□□□□□ -0.82
COL17A1-204ENST00000433822 DNAJB2P25686 324 aa9.93□□□□□ -0.82
COL17A1-204ENST00000433822 PKDCCQ504Y2 493 aa9.93□□□□□ -0.82
COL17A1-204ENST00000433822 TRIM67Q6ZTA4 783 aa9.93□□□□□ -0.82
COL17A1-204ENST00000433822 PUS7Q96PZ0 661 aaKnown RBP9.93□□□□□ -0.82
COL17A1-204ENST00000433822 SETD1AO15047 1707 aaKnown RBP9.93□□□□□ -0.82
COL17A1-204ENST00000433822 MROH2AA6NES4 1674 aa9.93□□□□□ -0.82
COL17A1-204ENST00000433822 CAMSAP1Q5T5Y3 1602 aa9.93□□□□□ -0.82
COL17A1-204ENST00000433822 NPATQ14207 1427 aa9.92□□□□□ -0.82
COL17A1-204ENST00000433822 DGAT1O75907 488 aa9.92□□□□□ -0.82
COL17A1-204ENST00000433822 SPRYD7Q5W111 196 aa9.92□□□□□ -0.82
COL17A1-204ENST00000433822 NGEFQ8N5V2 710 aa9.92□□□□□ -0.82
COL17A1-204ENST00000433822 ANKLE1Q8NAG6 615 aa9.92□□□□□ -0.82
COL17A1-204ENST00000433822 BCANQ96GW7 911 aa9.92□□□□□ -0.82
COL17A1-204ENST00000433822 POLR3GLQ9BT43 218 aa9.92□□□□□ -0.82
COL17A1-204ENST00000433822 ZFYVE9O95405 1425 aa9.91□□□□□ -0.82
COL17A1-204ENST00000433822 ZNF598Q86UK7 904 aaKnown RBP9.91□□□□□ -0.82
COL17A1-204ENST00000433822 RBM46Q8TBY0 533 aaKnown RBP9.91□□□□□ -0.82
COL17A1-204ENST00000433822 PANK3Q9H999 370 aa9.91□□□□□ -0.82
COL17A1-204ENST00000433822 REREQ9P2R6 1566 aa9.91□□□□□ -0.82
COL17A1-204ENST00000433822 DIP2CQ9Y2E4 1556 aa9.91□□□□□ -0.82
COL17A1-204ENST00000433822 USP32Q8NFA0 1604 aa9.9□□□□□ -0.82
COL17A1-204ENST00000433822 ALKQ9UM73 1620 aa9.9□□□□□ -0.82
COL17A1-204ENST00000433822 PRR20EP86478 221 aa9.9□□□□□ -0.82
COL17A1-204ENST00000433822 PRR20CP86479 221 aa9.9□□□□□ -0.82
COL17A1-204ENST00000433822 PRR20DP86480 221 aa9.9□□□□□ -0.82
COL17A1-204ENST00000433822 PRR20BP86481 221 aa9.9□□□□□ -0.82
COL17A1-204ENST00000433822 PRR20AP86496 221 aa9.9□□□□□ -0.82
COL17A1-204ENST00000433822 KMT5BQ4FZB7 885 aa9.9□□□□□ -0.82
COL17A1-204ENST00000433822 EMID1Q96A84 441 aaPredicted RBP9.9□□□□□ -0.82
COL17A1-204ENST00000433822 TMEM134Q9H6X4 195 aa9.9□□□□□ -0.82
COL17A1-204ENST00000433822 ERVK-7P63135 1459 aa9.9□□□□□ -0.83
COL17A1-204ENST00000433822 ADGRB1O14514 1584 aa9.89□□□□□ -0.83
COL17A1-204ENST00000433822 FANCIQ9NVI1 1328 aa9.89□□□□□ -0.83
COL17A1-204ENST00000433822 ACTN4O43707 911 aaKnown RBP9.89□□□□□ -0.83
COL17A1-204ENST00000433822 AMER1Q5JTC6 1135 aaPredicted RBP9.89□□□□□ -0.83
COL17A1-204ENST00000433822 TLL1O43897 1013 aa9.88□□□□□ -0.83
COL17A1-204ENST00000433822 PTGDRQ13258 359 aa9.88□□□□□ -0.83
COL17A1-204ENST00000433822 KNSTRNQ9Y448 316 aa9.88□□□□□ -0.83
COL17A1-204ENST00000433822 ARHGEF1Q92888 912 aaKnown RBP9.87□□□□□ -0.83
COL17A1-204ENST00000433822 RBM19Q9Y4C8 960 aaKnown RBP9.87□□□□□ -0.83
COL17A1-204ENST00000433822 UGGT1Q9NYU2 1555 aa9.87□□□□□ -0.83
COL17A1-204ENST00000433822 S1PR4O95977 384 aa9.86□□□□□ -0.83
COL17A1-204ENST00000433822 MLLT3P42568 568 aaPredicted RBP9.86□□□□□ -0.83
COL17A1-204ENST00000433822 PIP4K2BP78356 416 aa9.86□□□□□ -0.83
COL17A1-204ENST00000433822 ADGRG1Q9Y653 693 aa9.86□□□□□ -0.83
COL17A1-204ENST00000433822 ZNF142P52746 1687 aaPredicted RBP9.86□□□□□ -0.83
COL17A1-204ENST00000433822 AGLP35573 1532 aa9.86□□□□□ -0.83
COL17A1-204ENST00000433822 PPEF1O14829 653 aaPredicted RBP9.85□□□□□ -0.83
COL17A1-204ENST00000433822 ZNF697Q5TEC3 545 aa9.85□□□□□ -0.83
COL17A1-204ENST00000433822 LIAT1Q6ZQX7 453 aa9.85□□□□□ -0.83
COL17A1-204ENST00000433822 C14orf93Q9H972 538 aaKnown RBP9.85□□□□□ -0.83
COL17A1-204ENST00000433822 NEXMIFQ5QGS0 1516 aa9.85□□□□□ -0.83
COL17A1-204ENST00000433822 ADGRF5Q8IZF2 1346 aa9.84□□□□□ -0.83
COL17A1-204ENST00000433822 QRICH2Q9H0J4 1663 aa9.84□□□□□ -0.83
COL17A1-204ENST00000433822 SRCAPQ6ZRS2 3230 aa9.84□□□□□ -0.83
COL17A1-204ENST00000433822 RCCD1A6NED2 376 aa9.84□□□□□ -0.83
COL17A1-204ENST00000433822 NR1I2O75469 434 aa9.84□□□□□ -0.83
COL17A1-204ENST00000433822 ADH1BP00325 375 aa9.84□□□□□ -0.83
COL17A1-204ENST00000433822 CFHP08603 1231 aa9.84□□□□□ -0.83
COL17A1-204ENST00000433822 PPP2R1AP30153 589 aa9.84□□□□□ -0.83
COL17A1-204ENST00000433822 RRP1P56182 461 aaKnown RBP9.84□□□□□ -0.83
COL17A1-204ENST00000433822 SLC52A1Q9NWF4 448 aa9.84□□□□□ -0.83
COL17A1-204ENST00000433822 RGS17Q9UGC6 210 aaPredicted RBP9.84□□□□□ -0.83
COL17A1-204ENST00000433822 NINLQ9Y2I6 1382 aa9.84□□□□□ -0.83
COL17A1-204ENST00000433822 RCAN3Q9UKA8 241 aa9.83□□□□□ -0.84
COL17A1-204ENST00000433822 POLR3AO14802 1390 aaPredicted RBP9.83□□□□□ -0.84
COL17A1-204ENST00000433822 NSD2O96028 1365 aa9.83□□□□□ -0.84
COL17A1-204ENST00000433822 ZNF521Q96K83 1311 aa9.82□□□□□ -0.84
COL17A1-204ENST00000433822 CENPJQ9HC77 1338 aaPredicted RBP9.82□□□□□ -0.84
COL17A1-204ENST00000433822 FAM187AA6NFU0 413 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms