RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 MEIOBQ8N635 442 aa10.7□□□□□ -0.7
HDAC9-213ENST00000433709 AGBL1Q96MI9 1066 aa10.7□□□□□ -0.7
HDAC9-213ENST00000433709 USP17L3A6NCW0 530 aa10.68□□□□□ -0.7
HDAC9-213ENST00000433709 USP17L4A6NCW7 530 aa10.68□□□□□ -0.7
HDAC9-213ENST00000433709 USP4Q13107 963 aa10.68□□□□□ -0.7
HDAC9-213ENST00000433709 NCOA4Q13772 614 aa10.68□□□□□ -0.7
HDAC9-213ENST00000433709 USP17L2Q6R6M4 530 aa10.68□□□□□ -0.7
HDAC9-213ENST00000433709 USP17L1Q7RTZ2 530 aa10.68□□□□□ -0.7
HDAC9-213ENST00000433709 TRIM46Q7Z4K8 759 aa10.68□□□□□ -0.7
HDAC9-213ENST00000433709 OSBPL3Q9H4L5 887 aa10.68□□□□□ -0.7
HDAC9-213ENST00000433709 ESF1Q9H501 851 aaKnown RBP10.68□□□□□ -0.7
HDAC9-213ENST00000433709 MAFBQ9Y5Q3 323 aaPredicted RBP10.68□□□□□ -0.7
HDAC9-213ENST00000433709 MYCP01106 439 aaPredicted RBP10.67□□□□□ -0.7
HDAC9-213ENST00000433709 RELBQ01201 579 aa10.67□□□□□ -0.7
HDAC9-213ENST00000433709 KDF1Q8NAX2 398 aaPredicted RBP10.67□□□□□ -0.7
HDAC9-213ENST00000433709 ATP13A2Q9NQ11 1180 aa10.67□□□□□ -0.7
HDAC9-213ENST00000433709 ADH1AP07327 375 aa10.66□□□□□ -0.7
HDAC9-213ENST00000433709 CFAP70Q5T0N1 1121 aa10.66□□□□□ -0.7
HDAC9-213ENST00000433709 MRPL14Q6P1L8 145 aaKnown RBP10.66□□□□□ -0.7
HDAC9-213ENST00000433709 PLEKHM2Q8IWE5 1019 aa10.66□□□□□ -0.7
HDAC9-213ENST00000433709 TRIM52Q96A61 297 aa10.66□□□□□ -0.7
HDAC9-213ENST00000433709 LMOD1P29536 600 aaPredicted RBP10.65□□□□□ -0.7
HDAC9-213ENST00000433709 EML3Q32P44 896 aa10.65□□□□□ -0.7
HDAC9-213ENST00000433709 C6orf118Q5T5N4 469 aa10.65□□□□□ -0.7
HDAC9-213ENST00000433709 CCDC82Q8N4S0 544 aa10.65□□□□□ -0.7
HDAC9-213ENST00000433709 CCDC97Q96F63 343 aaPredicted RBP10.65□□□□□ -0.7
HDAC9-213ENST00000433709 LZTS3O60299 673 aaPredicted RBP10.64□□□□□ -0.71
HDAC9-213ENST00000433709 LINC00528Q8N1L1 170 aa10.64□□□□□ -0.71
HDAC9-213ENST00000433709 SIRT1Q96EB6 747 aa10.64□□□□□ -0.71
HDAC9-213ENST00000433709 PURBQ96QR8 312 aaKnown RBP10.64□□□□□ -0.71
HDAC9-213ENST00000433709 TSEN34Q9BSV6 310 aaKnown RBP10.64□□□□□ -0.71
HDAC9-213ENST00000433709 ZNF395Q9H8N7 513 aaPredicted RBP10.64□□□□□ -0.71
HDAC9-213ENST00000433709 SERPINA10Q9UK55 444 aa10.64□□□□□ -0.71
HDAC9-213ENST00000433709 UNC13AQ9UPW8 1703 aa10.64□□□□□ -0.71
HDAC9-213ENST00000433709 ATP5J2-PTCD1G3V325 749 aa10.63□□□□□ -0.71
HDAC9-213ENST00000433709 UPP2O95045 317 aa10.63□□□□□ -0.71
HDAC9-213ENST00000433709 RFX1P22670 979 aa10.63□□□□□ -0.71
HDAC9-213ENST00000433709 PTGIRP43119 386 aa10.63□□□□□ -0.71
HDAC9-213ENST00000433709 ZFP42Q96MM3 310 aa10.63□□□□□ -0.71
HDAC9-213ENST00000433709 NOD1Q9Y239 953 aa10.63□□□□□ -0.71
HDAC9-213ENST00000433709 STAU1O95793 577 aaKnown RBP10.62□□□□□ -0.71
HDAC9-213ENST00000433709 BMP2P12643 396 aa10.62□□□□□ -0.71
HDAC9-213ENST00000433709 CYP2U1Q7Z449 544 aa10.62□□□□□ -0.71
HDAC9-213ENST00000433709 MKRN1Q9UHC7 482 aaKnown RBP10.62□□□□□ -0.71
HDAC9-213ENST00000433709 BICRAQ9NZM4 1560 aa10.61□□□□□ -0.71
HDAC9-213ENST00000433709 GMPR2Q9P2T1 348 aaKnown RBP10.61□□□□□ -0.71
HDAC9-213ENST00000433709 PCDHGA11Q9Y5H2 935 aa10.61□□□□□ -0.71
HDAC9-213ENST00000433709 POTECB2RU33 542 aa10.6□□□□□ -0.71
HDAC9-213ENST00000433709 SCARF1Q14162 830 aa10.6□□□□□ -0.71
HDAC9-213ENST00000433709 A0A1W2PRU2 124 aa10.59□□□□□ -0.71
HDAC9-213ENST00000433709 GTF2IP78347 998 aa10.59□□□□□ -0.71
HDAC9-213ENST00000433709 CDCA8Q53HL2 280 aa10.59□□□□□ -0.71
HDAC9-213ENST00000433709 KANK4Q5T7N3 995 aaPredicted RBP10.59□□□□□ -0.71
HDAC9-213ENST00000433709 INSM2Q96T92 566 aaPredicted RBP10.59□□□□□ -0.71
HDAC9-213ENST00000433709 ARHGEF10LQ9HCE6 1279 aa10.59□□□□□ -0.71
HDAC9-213ENST00000433709 RAB6BQ9NRW1 208 aa10.59□□□□□ -0.71
HDAC9-213ENST00000433709 SPINT1O43278 529 aa10.58□□□□□ -0.72
HDAC9-213ENST00000433709 MEN1O00255 615 aa10.57□□□□□ -0.72
HDAC9-213ENST00000433709 GNRH1P01148 92 aa10.57□□□□□ -0.72
HDAC9-213ENST00000433709 CTSOP43234 321 aaPredicted RBP10.57□□□□□ -0.72
HDAC9-213ENST00000433709 CLDN10P78369 228 aa10.57□□□□□ -0.72
HDAC9-213ENST00000433709 TRIM50Q86XT4 487 aa10.57□□□□□ -0.72
HDAC9-213ENST00000433709 ARID3AQ99856 593 aa10.57□□□□□ -0.72
HDAC9-213ENST00000433709 ZBTB7BO15156 539 aaPredicted RBP10.56□□□□□ -0.72
HDAC9-213ENST00000433709 PSME1Q06323 249 aa10.56□□□□□ -0.72
HDAC9-213ENST00000433709 OGFOD1Q8N543 542 aa10.56□□□□□ -0.72
HDAC9-213ENST00000433709 VRTNQ9H8Y1 702 aa10.56□□□□□ -0.72
HDAC9-213ENST00000433709 ETNK1Q9HBU6 452 aa10.56□□□□□ -0.72
HDAC9-213ENST00000433709 KIAA1024Q9UPX6 916 aa10.56□□□□□ -0.72
HDAC9-213ENST00000433709 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.55□□□□□ -0.72
HDAC9-213ENST00000433709 IL2RAP01589 272 aa10.55□□□□□ -0.72
HDAC9-213ENST00000433709 RASA1P20936 1047 aa10.55□□□□□ -0.72
HDAC9-213ENST00000433709 SCNN1DP51172 638 aa10.55□□□□□ -0.72
HDAC9-213ENST00000433709 POLMQ9NP87 494 aaPredicted RBP10.55□□□□□ -0.72
HDAC9-213ENST00000433709 SNRPBP14678 240 aaKnown RBP10.54□□□□□ -0.72
HDAC9-213ENST00000433709 SRPK2P78362 688 aaKnown RBP10.54□□□□□ -0.72
HDAC9-213ENST00000433709 CLN3Q13286 438 aa10.54□□□□□ -0.72
HDAC9-213ENST00000433709 ZNF594Q96JF6 807 aaPredicted RBP10.54□□□□□ -0.72
HDAC9-213ENST00000433709 TRIM47Q96LD4 638 aa10.54□□□□□ -0.72
HDAC9-213ENST00000433709 SENP2Q9HC62 589 aa10.54□□□□□ -0.72
HDAC9-213ENST00000433709 DNAAF2Q9NVR5 837 aaKnown RBP10.54□□□□□ -0.72
HDAC9-213ENST00000433709 SOS2Q07890 1332 aaPredicted RBP10.54□□□□□ -0.72
HDAC9-213ENST00000433709 ATP1A2P50993 1020 aa10.53□□□□□ -0.72
HDAC9-213ENST00000433709 GDF10P55107 478 aa10.53□□□□□ -0.72
HDAC9-213ENST00000433709 CRTC2Q53ET0 693 aaPredicted RBP10.53□□□□□ -0.72
HDAC9-213ENST00000433709 TPCN2Q8NHX9 752 aa10.53□□□□□ -0.72
HDAC9-213ENST00000433709 CNKSR1Q969H4 720 aa10.53□□□□□ -0.72
HDAC9-213ENST00000433709 XAGE2Q96GT9 111 aa10.53□□□□□ -0.72
HDAC9-213ENST00000433709 SCRIBQ14160 1630 aa10.52□□□□□ -0.73
HDAC9-213ENST00000433709 FIGNL2A6NMB9 653 aa10.52□□□□□ -0.73
HDAC9-213ENST00000433709 TTLL8A6PVC2 850 aa10.52□□□□□ -0.73
HDAC9-213ENST00000433709 SOBPA7XYQ1 873 aa10.52□□□□□ -0.73
HDAC9-213ENST00000433709 TMEM229AB2RXF0 380 aa10.52□□□□□ -0.73
HDAC9-213ENST00000433709 C11orf95C9JLR9 678 aaPredicted RBP10.52□□□□□ -0.73
HDAC9-213ENST00000433709 NLRP3Q96P20 1036 aa10.52□□□□□ -0.73
HDAC9-213ENST00000433709 ESYT1Q9BSJ8 1104 aa10.52□□□□□ -0.73
HDAC9-213ENST00000433709 INHAP05111 366 aa10.51□□□□□ -0.73
HDAC9-213ENST00000433709 ESCO1Q5FWF5 840 aa10.51□□□□□ -0.73
HDAC9-213ENST00000433709 FOXD4L5Q5VV16 416 aaPredicted RBP10.51□□□□□ -0.73
HDAC9-213ENST00000433709 CCDC102BQ68D86 513 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms