RNA–Protein interactions for RNA: ENST00000433650.5

SEMA4D-210, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-210ENST00000433650 HOXC9P31274 260 aa18.98■□□□□ 0.63
SEMA4D-210ENST00000433650 DDX54Q8TDD1 881 aaKnown RBP18.97■□□□□ 0.63
SEMA4D-210ENST00000433650 PKD1L3Q7Z443 1732 aa18.97■□□□□ 0.63
SEMA4D-210ENST00000433650 TOGARAM1Q9Y4F4 1720 aa18.97■□□□□ 0.63
SEMA4D-210ENST00000433650 SLC27A3Q5K4L6 730 aa18.96■□□□□ 0.63
SEMA4D-210ENST00000433650 AKT1S1Q96B36 256 aa18.96■□□□□ 0.63
SEMA4D-210ENST00000433650 ARXQ96QS3 562 aa18.96■□□□□ 0.63
SEMA4D-210ENST00000433650 AMPHP49418 695 aa18.95■□□□□ 0.62
SEMA4D-210ENST00000433650 GOLGB1Q14789 3259 aaKnown RBP18.94■□□□□ 0.62
SEMA4D-210ENST00000433650 SLC24A1O60721 1099 aa18.94■□□□□ 0.62
SEMA4D-210ENST00000433650 FBLN1P23142 703 aa18.94■□□□□ 0.62
SEMA4D-210ENST00000433650 MAP2P11137 1827 aaKnown RBP18.93■□□□□ 0.62
SEMA4D-210ENST00000433650 SMG6Q86US8 1419 aaKnown RBP18.93■□□□□ 0.62
SEMA4D-210ENST00000433650 PNPLA7Q6ZV29 1317 aa18.93■□□□□ 0.62
SEMA4D-210ENST00000433650 USP47Q96K76 1375 aa18.93■□□□□ 0.62
SEMA4D-210ENST00000433650 SYTL4Q96C24 671 aaPredicted RBP18.92■□□□□ 0.62
SEMA4D-210ENST00000433650 PRIM1P49642 420 aaKnown RBP18.91■□□□□ 0.62
SEMA4D-210ENST00000433650 RRS1Q15050 365 aaKnown RBP18.9■□□□□ 0.62
SEMA4D-210ENST00000433650 ZNF784Q8NCA9 323 aaPredicted RBP18.9■□□□□ 0.62
SEMA4D-210ENST00000433650 ZCRB1Q8TBF4 217 aaKnown RBP18.9■□□□□ 0.62
SEMA4D-210ENST00000433650 SLC16A10Q8TF71 515 aa18.9■□□□□ 0.62
SEMA4D-210ENST00000433650 UBR3Q6ZT12 1888 aa18.9■□□□□ 0.62
SEMA4D-210ENST00000433650 KCNQ4P56696 695 aa18.89■□□□□ 0.61
SEMA4D-210ENST00000433650 CGNL1Q0VF96 1302 aa18.89■□□□□ 0.61
SEMA4D-210ENST00000433650 FYB1O15117 783 aa18.88■□□□□ 0.61
SEMA4D-210ENST00000433650 TMF1P82094 1093 aa18.88■□□□□ 0.61
SEMA4D-210ENST00000433650 GGNBP2Q9H3C7 697 aa18.88■□□□□ 0.61
SEMA4D-210ENST00000433650 TFCP2L1Q9NZI6 479 aa18.88■□□□□ 0.61
SEMA4D-210ENST00000433650 C4BP0C0L5 1744 aa18.87■□□□□ 0.61
SEMA4D-210ENST00000433650 FLT4P35916 1363 aa18.87■□□□□ 0.61
SEMA4D-210ENST00000433650 NBPF6Q5VWK0 638 aa18.87■□□□□ 0.61
SEMA4D-210ENST00000433650 USHBP1Q8N6Y0 703 aa18.87■□□□□ 0.61
SEMA4D-210ENST00000433650 NBPF4Q96M43 638 aa18.87■□□□□ 0.61
SEMA4D-210ENST00000433650 INSRP06213 1382 aa18.86■□□□□ 0.61
SEMA4D-210ENST00000433650 KIF24Q5T7B8 1368 aa18.86■□□□□ 0.61
SEMA4D-210ENST00000433650 POLD1P28340 1107 aa18.86■□□□□ 0.61
SEMA4D-210ENST00000433650 CCNL1Q9UK58 526 aaPredicted RBP18.86■□□□□ 0.61
SEMA4D-210ENST00000433650 PCDH11XQ9BZA7 1347 aa18.84■□□□□ 0.61
SEMA4D-210ENST00000433650 PCDH11YQ9BZA8 1340 aa18.84■□□□□ 0.61
SEMA4D-210ENST00000433650 KLHL34Q8N239 644 aa18.84■□□□□ 0.61
SEMA4D-210ENST00000433650 RAPGEF4Q8WZA2 1011 aa18.84■□□□□ 0.61
SEMA4D-210ENST00000433650 NCAPD2Q15021 1401 aa18.83■□□□□ 0.6
SEMA4D-210ENST00000433650 TATP17735 454 aaPredicted RBP18.82■□□□□ 0.6
SEMA4D-210ENST00000433650 GPR162Q16538 588 aa18.82■□□□□ 0.6
SEMA4D-210ENST00000433650 NSD3Q9BZ95 1437 aa18.82■□□□□ 0.6
SEMA4D-210ENST00000433650 HSP90AB2PQ58FF8 381 aa18.81■□□□□ 0.6
SEMA4D-210ENST00000433650 CDCA8Q53HL2 280 aa18.8■□□□□ 0.6
SEMA4D-210ENST00000433650 PALLDQ8WX93 1383 aa18.8■□□□□ 0.6
SEMA4D-210ENST00000433650 NLGN2Q8NFZ4 835 aa18.79■□□□□ 0.6
SEMA4D-210ENST00000433650 COL23A1Q86Y22 540 aaPredicted RBP18.78■□□□□ 0.6
SEMA4D-210ENST00000433650 EMILIN1Q9Y6C2 1016 aa18.77■□□□□ 0.6
SEMA4D-210ENST00000433650 CYP27B1O15528 508 aa18.76■□□□□ 0.59
SEMA4D-210ENST00000433650 MSH5O43196 834 aa18.76■□□□□ 0.59
SEMA4D-210ENST00000433650 PELP1Q8IZL8 1130 aaKnown RBP18.76■□□□□ 0.59
SEMA4D-210ENST00000433650 CARD14Q9BXL6 1004 aa18.76■□□□□ 0.59
SEMA4D-210ENST00000433650 MSL1Q68DK7 614 aa18.74■□□□□ 0.59
SEMA4D-210ENST00000433650 MPRIPQ6WCQ1 1025 aa18.74■□□□□ 0.59
SEMA4D-210ENST00000433650 KIF13BQ9NQT8 1826 aa18.73■□□□□ 0.59
SEMA4D-210ENST00000433650 COL5A3P25940 1745 aaPredicted RBP18.73■□□□□ 0.59
SEMA4D-210ENST00000433650 ZNF831Q5JPB2 1677 aa18.73■□□□□ 0.59
SEMA4D-210ENST00000433650 YBX3P16989 372 aaKnown RBP eCLIP18.71■□□□□ 0.59
SEMA4D-210ENST00000433650 HMGB2P26583 209 aaKnown RBP18.71■□□□□ 0.59
SEMA4D-210ENST00000433650 C1QTNF8P60827 252 aa18.71■□□□□ 0.59
SEMA4D-210ENST00000433650 TRIM26Q12899 539 aaPredicted RBP18.71■□□□□ 0.59
SEMA4D-210ENST00000433650 VIRMAQ69YN4 1812 aaKnown RBP18.71■□□□□ 0.59
SEMA4D-210ENST00000433650 FLAD1Q8NFF5 587 aa18.7■□□□□ 0.58
SEMA4D-210ENST00000433650 SMARCC1Q92922 1105 aaPredicted RBP18.7■□□□□ 0.58
SEMA4D-210ENST00000433650 KIAA1551Q9HCM1 1747 aa18.69■□□□□ 0.58
SEMA4D-210ENST00000433650 SENP3-EIF4A1A0A087X0R7 540 aa18.69■□□□□ 0.58
SEMA4D-210ENST00000433650 PPM1GO15355 546 aaPredicted RBP18.69■□□□□ 0.58
SEMA4D-210ENST00000433650 WASHC2AQ641Q2 1341 aa18.69■□□□□ 0.58
SEMA4D-210ENST00000433650 C4AP0C0L4 1744 aa18.69■□□□□ 0.58
SEMA4D-210ENST00000433650 GRIN3BO60391 1043 aa18.68■□□□□ 0.58
SEMA4D-210ENST00000433650 NKX1-1Q15270 411 aaPredicted RBP18.68■□□□□ 0.58
SEMA4D-210ENST00000433650 AMIGO3Q86WK7 504 aa18.68■□□□□ 0.58
SEMA4D-210ENST00000433650 AK7Q96M32 723 aa18.68■□□□□ 0.58
SEMA4D-210ENST00000433650 GIGYF1O75420 1035 aaPredicted RBP18.67■□□□□ 0.58
SEMA4D-210ENST00000433650 PIGBQ92521 554 aa18.67■□□□□ 0.58
SEMA4D-210ENST00000433650 SPG7Q9UQ90 795 aa18.67■□□□□ 0.58
SEMA4D-210ENST00000433650 CD2APQ9Y5K6 639 aa18.67■□□□□ 0.58
SEMA4D-210ENST00000433650 PLEKHG2Q9H7P9 1386 aa18.67■□□□□ 0.58
SEMA4D-210ENST00000433650 N4BP2Q86UW6 1770 aaPredicted RBP18.66■□□□□ 0.58
SEMA4D-210ENST00000433650 EYA1Q99502 592 aa18.66■□□□□ 0.58
SEMA4D-210ENST00000433650 BRCA1P38398 1863 aaKnown RBP18.66■□□□□ 0.58
SEMA4D-210ENST00000433650 MYH14Q7Z406 1995 aaKnown RBP18.66■□□□□ 0.58
SEMA4D-210ENST00000433650 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.65■□□□□ 0.58
SEMA4D-210ENST00000433650 CICQ96RK0 1608 aaPredicted RBP18.64■□□□□ 0.57
SEMA4D-210ENST00000433650 PHF14O94880 888 aa18.64■□□□□ 0.57
SEMA4D-210ENST00000433650 TIMELESSQ9UNS1 1208 aa18.64■□□□□ 0.57
SEMA4D-210ENST00000433650 ATP10DQ9P241 1426 aa18.64■□□□□ 0.57
SEMA4D-210ENST00000433650 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.63■□□□□ 0.57
SEMA4D-210ENST00000433650 LOC102724428A0A0B4J2F2 783 aa18.63■□□□□ 0.57
SEMA4D-210ENST00000433650 SSFA2P28290 1259 aa18.63■□□□□ 0.57
SEMA4D-210ENST00000433650 SIK1P57059 783 aa18.63■□□□□ 0.57
SEMA4D-210ENST00000433650 LINC00116Q8NCU8 138 aa18.63■□□□□ 0.57
SEMA4D-210ENST00000433650 TMOD3Q9NYL9 352 aa18.63■□□□□ 0.57
SEMA4D-210ENST00000433650 POLKQ9UBT6 870 aa18.63■□□□□ 0.57
SEMA4D-210ENST00000433650 SCN11AQ9UI33 1791 aa18.63■□□□□ 0.57
SEMA4D-210ENST00000433650 PHKG2P15735 406 aa18.62■□□□□ 0.57
SEMA4D-210ENST00000433650 ADCY9O60503 1353 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms