RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 HSP90AB2PQ58FF8 381 aa30.32■■■□□ 2.44
RPUSD3-206ENST00000433535 ZCRB1Q8TBF4 217 aaKnown RBP30.32■■■□□ 2.44
RPUSD3-206ENST00000433535 INSRP06213 1382 aa30.31■■■□□ 2.44
RPUSD3-206ENST00000433535 SYTL4Q96C24 671 aaPredicted RBP30.31■■■□□ 2.44
RPUSD3-206ENST00000433535 LRRC4BQ9NT99 713 aa30.3■■■□□ 2.44
RPUSD3-206ENST00000433535 ATF5Q9Y2D1 282 aaPredicted RBP30.29■■■□□ 2.44
RPUSD3-206ENST00000433535 NSD2O96028 1365 aa30.28■■■□□ 2.44
RPUSD3-206ENST00000433535 ANKRD26Q9UPS8 1709 aa30.28■■■□□ 2.44
RPUSD3-206ENST00000433535 PRIM1P49642 420 aaKnown RBP30.28■■■□□ 2.44
RPUSD3-206ENST00000433535 ZNF827Q17R98 1081 aa30.28■■■□□ 2.44
RPUSD3-206ENST00000433535 POLR3GLQ9BT43 218 aa30.28■■■□□ 2.44
RPUSD3-206ENST00000433535 EMILIN1Q9Y6C2 1016 aa30.28■■■□□ 2.44
RPUSD3-206ENST00000433535 KIF24Q5T7B8 1368 aa30.28■■■□□ 2.44
RPUSD3-206ENST00000433535 PTGER2P43116 358 aa30.27■■■□□ 2.44
RPUSD3-206ENST00000433535 RAPGEF4Q8WZA2 1011 aa30.26■■■□□ 2.43
RPUSD3-206ENST00000433535 LY75O60449 1722 aa30.25■■■□□ 2.43
RPUSD3-206ENST00000433535 CGNL1Q0VF96 1302 aa30.23■■■□□ 2.43
RPUSD3-206ENST00000433535 TATP17735 454 aaPredicted RBP30.22■■■□□ 2.43
RPUSD3-206ENST00000433535 KCNQ4P56696 695 aa30.22■■■□□ 2.43
RPUSD3-206ENST00000433535 CCER1Q8TC90 406 aaPredicted RBP30.22■■■□□ 2.43
RPUSD3-206ENST00000433535 MTFR1LQ9H019 292 aa30.22■■■□□ 2.43
RPUSD3-206ENST00000433535 PPM1GO15355 546 aaPredicted RBP30.21■■■□□ 2.43
RPUSD3-206ENST00000433535 TUBGCP6Q96RT7 1819 aa30.2■■■□□ 2.43
RPUSD3-206ENST00000433535 SLC27A3Q5K4L6 730 aa30.2■■■□□ 2.43
RPUSD3-206ENST00000433535 MAP2P11137 1827 aaKnown RBP30.19■■■□□ 2.42
RPUSD3-206ENST00000433535 QSER1Q2KHR3 1735 aa30.19■■■□□ 2.42
RPUSD3-206ENST00000433535 HSPA5P11021 654 aaKnown RBP30.19■■■□□ 2.42
RPUSD3-206ENST00000433535 EIF4G2P78344 907 aaKnown RBP eCLIP30.18■■■□□ 2.42
RPUSD3-206ENST00000433535 AKT1S1Q96B36 256 aa30.18■■■□□ 2.42
RPUSD3-206ENST00000433535 PKD1L3Q7Z443 1732 aa30.18■■■□□ 2.42
RPUSD3-206ENST00000433535 PCDH11XQ9BZA7 1347 aa30.18■■■□□ 2.42
RPUSD3-206ENST00000433535 PCDH11YQ9BZA8 1340 aa30.18■■■□□ 2.42
RPUSD3-206ENST00000433535 SGIP1Q9BQI5 828 aa30.17■■■□□ 2.42
RPUSD3-206ENST00000433535 TOGARAM1Q9Y4F4 1720 aa30.16■■■□□ 2.42
RPUSD3-206ENST00000433535 NCAPD2Q15021 1401 aa30.15■■■□□ 2.42
RPUSD3-206ENST00000433535 FHDC1Q9C0D6 1143 aaPredicted RBP30.13■■■□□ 2.41
RPUSD3-206ENST00000433535 CCNL1Q9UK58 526 aaPredicted RBP30.12■■■□□ 2.41
RPUSD3-206ENST00000433535 WASHC2AQ641Q2 1341 aa30.12■■■□□ 2.41
RPUSD3-206ENST00000433535 PNPLA7Q6ZV29 1317 aa30.12■■■□□ 2.41
RPUSD3-206ENST00000433535 CYP27B1O15528 508 aa30.11■■■□□ 2.41
RPUSD3-206ENST00000433535 TNNT2P45379 298 aaPredicted RBP30.11■■■□□ 2.41
RPUSD3-206ENST00000433535 POLKQ9UBT6 870 aa30.11■■■□□ 2.41
RPUSD3-206ENST00000433535 DCAF8L1A6NGE4 600 aa30.1■■■□□ 2.41
RPUSD3-206ENST00000433535 TFCP2L1Q9NZI6 479 aa30.09■■■□□ 2.41
RPUSD3-206ENST00000433535 ITGB4P16144 1822 aa30.08■■■□□ 2.41
RPUSD3-206ENST00000433535 C5P01031 1676 aa30.08■■■□□ 2.41
RPUSD3-206ENST00000433535 YY1P25490 414 aa30.08■■■□□ 2.41
RPUSD3-206ENST00000433535 SYT17Q9BSW7 474 aa30.08■■■□□ 2.41
RPUSD3-206ENST00000433535 ARXQ96QS3 562 aa30.07■■■□□ 2.4
RPUSD3-206ENST00000433535 EYA1Q99502 592 aa30.07■■■□□ 2.4
RPUSD3-206ENST00000433535 PANK3Q9H999 370 aa30.07■■■□□ 2.4
RPUSD3-206ENST00000433535 COL24A1Q17RW2 1714 aa30.05■■■□□ 2.4
RPUSD3-206ENST00000433535 MPRIPQ6WCQ1 1025 aa30.05■■■□□ 2.4
RPUSD3-206ENST00000433535 PALLDQ8WX93 1383 aa30.04■■■□□ 2.4
RPUSD3-206ENST00000433535 TAF1LQ8IZX4 1826 aa30.02■■■□□ 2.4
RPUSD3-206ENST00000433535 EIF4A2Q14240 407 aaKnown RBP30.02■■■□□ 2.4
RPUSD3-206ENST00000433535 SLC16A10Q8TF71 515 aa30.02■■■□□ 2.4
RPUSD3-206ENST00000433535 SPG7Q9UQ90 795 aa30.01■■■□□ 2.39
RPUSD3-206ENST00000433535 MAP3K5Q99683 1374 aa29.99■■■□□ 2.39
RPUSD3-206ENST00000433535 POLD1P28340 1107 aa29.97■■■□□ 2.39
RPUSD3-206ENST00000433535 KLHL34Q8N239 644 aa29.97■■■□□ 2.39
RPUSD3-206ENST00000433535 NKX1-1Q15270 411 aaPredicted RBP29.96■■■□□ 2.39
RPUSD3-206ENST00000433535 MSH5O43196 834 aa29.95■■■□□ 2.39
RPUSD3-206ENST00000433535 COL23A1Q86Y22 540 aaPredicted RBP29.95■■■□□ 2.39
RPUSD3-206ENST00000433535 PIGBQ92521 554 aa29.95■■■□□ 2.39
RPUSD3-206ENST00000433535 C4BP0C0L5 1744 aa29.95■■■□□ 2.38
RPUSD3-206ENST00000433535 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.94■■■□□ 2.38
RPUSD3-206ENST00000433535 IGSF1Q8N6C5 1336 aa29.93■■■□□ 2.38
RPUSD3-206ENST00000433535 PHKG2P15735 406 aa29.92■■■□□ 2.38
RPUSD3-206ENST00000433535 SMARCC1Q92922 1105 aaPredicted RBP29.92■■■□□ 2.38
RPUSD3-206ENST00000433535 MSL1Q68DK7 614 aa29.9■■■□□ 2.38
RPUSD3-206ENST00000433535 MORC1Q86VD1 984 aa29.9■■■□□ 2.38
RPUSD3-206ENST00000433535 IFNL2Q8IZJ0 200 aa29.9■■■□□ 2.38
RPUSD3-206ENST00000433535 TMOD3Q9NYL9 352 aa29.89■■■□□ 2.38
RPUSD3-206ENST00000433535 KNSTRNQ9Y448 316 aa29.87■■■□□ 2.37
RPUSD3-206ENST00000433535 PLEKHG2Q9H7P9 1386 aa29.87■■■□□ 2.37
RPUSD3-206ENST00000433535 UBR3Q6ZT12 1888 aa29.87■■■□□ 2.37
RPUSD3-206ENST00000433535 KIF7Q2M1P5 1343 aa29.86■■■□□ 2.37
RPUSD3-206ENST00000433535 AMIGO3Q86WK7 504 aa29.85■■■□□ 2.37
RPUSD3-206ENST00000433535 AK7Q96M32 723 aa29.85■■■□□ 2.37
RPUSD3-206ENST00000433535 ASAP1Q9ULH1 1129 aa29.85■■■□□ 2.37
RPUSD3-206ENST00000433535 NLGN2Q8NFZ4 835 aa29.84■■■□□ 2.37
RPUSD3-206ENST00000433535 CHD4Q14839 1912 aa29.83■■■□□ 2.37
RPUSD3-206ENST00000433535 LOC102724428A0A0B4J2F2 783 aa29.83■■■□□ 2.37
RPUSD3-206ENST00000433535 SIK1P57059 783 aa29.83■■■□□ 2.37
RPUSD3-206ENST00000433535 SMIM5Q71RC9 77 aa29.83■■■□□ 2.37
RPUSD3-206ENST00000433535 AEBP1Q8IUX7 1158 aa29.82■■■□□ 2.36
RPUSD3-206ENST00000433535 LINC00116Q8NCU8 138 aa29.82■■■□□ 2.36
RPUSD3-206ENST00000433535 PHF14O94880 888 aa29.81■■■□□ 2.36
RPUSD3-206ENST00000433535 HMGB2P26583 209 aaKnown RBP29.81■■■□□ 2.36
RPUSD3-206ENST00000433535 GPR162Q16538 588 aa29.81■■■□□ 2.36
RPUSD3-206ENST00000433535 FLAD1Q8NFF5 587 aa29.81■■■□□ 2.36
RPUSD3-206ENST00000433535 AMER1Q5JTC6 1135 aaPredicted RBP29.8■■■□□ 2.36
RPUSD3-206ENST00000433535 KDM6AO15550 1401 aaPredicted RBP29.79■■■□□ 2.36
RPUSD3-206ENST00000433535 ITPK1Q13572 414 aa29.79■■■□□ 2.36
RPUSD3-206ENST00000433535 PELP1Q8IZL8 1130 aaKnown RBP29.79■■■□□ 2.36
RPUSD3-206ENST00000433535 UTRNP46939 3433 aa29.79■■■□□ 2.36
RPUSD3-206ENST00000433535 PLEKHO1Q53GL0 409 aaPredicted RBP29.78■■■□□ 2.36
RPUSD3-206ENST00000433535 ZNF530Q6P9A1 599 aaPredicted RBP29.78■■■□□ 2.36
RPUSD3-206ENST00000433535 ATG3Q9NT62 314 aa29.78■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms