RNA–Protein interactions for RNA: ENST00000433298.5

LRCH3-205, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 977 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-205ENST00000433298 SOX12O15370 315 aa11.06□□□□□ -0.64
LRCH3-205ENST00000433298 ITSN1Q15811 1721 aa11.06□□□□□ -0.64
LRCH3-205ENST00000433298 USP19O94966 1318 aa11.06□□□□□ -0.64
LRCH3-205ENST00000433298 BRD4O60885 1362 aaPredicted RBP11.05□□□□□ -0.64
LRCH3-205ENST00000433298 BTAF1O14981 1849 aa11.05□□□□□ -0.64
LRCH3-205ENST00000433298 MNX1P50219 401 aaPredicted RBP11.05□□□□□ -0.64
LRCH3-205ENST00000433298 FKBP8Q14318 412 aa11.05□□□□□ -0.64
LRCH3-205ENST00000433298 NLRP13Q86W25 1043 aa11.05□□□□□ -0.64
LRCH3-205ENST00000433298 AXIN2Q9Y2T1 843 aa11.05□□□□□ -0.64
LRCH3-205ENST00000433298 USP6P35125 1406 aa11.04□□□□□ -0.64
LRCH3-205ENST00000433298 TOMM70O94826 608 aa11.04□□□□□ -0.64
LRCH3-205ENST00000433298 NMRK2Q9NPI5 230 aa11.04□□□□□ -0.64
LRCH3-205ENST00000433298 BCL9O00512 1426 aa11.03□□□□□ -0.64
LRCH3-205ENST00000433298 JMYQ8N9B5 988 aa11.03□□□□□ -0.64
LRCH3-205ENST00000433298 COL24A1Q17RW2 1714 aa11.03□□□□□ -0.64
LRCH3-205ENST00000433298 WDR17Q8IZU2 1322 aa11.03□□□□□ -0.64
LRCH3-205ENST00000433298 RGPD5Q99666 1765 aa11.03□□□□□ -0.64
LRCH3-205ENST00000433298 HSPA1AP0DMV8 641 aaKnown RBP11.02□□□□□ -0.65
LRCH3-205ENST00000433298 HSPA1BP0DMV9 641 aaKnown RBP11.02□□□□□ -0.65
LRCH3-205ENST00000433298 MIER1Q8N108 512 aa11.02□□□□□ -0.65
LRCH3-205ENST00000433298 CDCA7Q9BWT1 371 aaPredicted RBP11.02□□□□□ -0.65
LRCH3-205ENST00000433298 CDK19Q9BWU1 502 aa11.02□□□□□ -0.65
LRCH3-205ENST00000433298 NLRP6P59044 892 aa11.01□□□□□ -0.65
LRCH3-205ENST00000433298 ARHGEF28Q8N1W1 1705 aaKnown RBP11.01□□□□□ -0.65
LRCH3-205ENST00000433298 COL23A1Q86Y22 540 aaPredicted RBP11□□□□□ -0.65
LRCH3-205ENST00000433298 C16orf71Q8IYS4 520 aaPredicted RBP11□□□□□ -0.65
LRCH3-205ENST00000433298 SYTL4Q96C24 671 aaPredicted RBP11□□□□□ -0.65
LRCH3-205ENST00000433298 DCBLD2Q96PD2 775 aa11□□□□□ -0.65
LRCH3-205ENST00000433298 IGSF1Q8N6C5 1336 aa11□□□□□ -0.65
LRCH3-205ENST00000433298 QSER1Q2KHR3 1735 aa11□□□□□ -0.65
LRCH3-205ENST00000433298 TNS2Q63HR2 1409 aa11□□□□□ -0.65
LRCH3-205ENST00000433298 CARD10Q9BWT7 1032 aa10.99□□□□□ -0.65
LRCH3-205ENST00000433298 POLR3AO14802 1390 aaPredicted RBP10.99□□□□□ -0.65
LRCH3-205ENST00000433298 COL18A1P39060 1754 aa10.98□□□□□ -0.65
LRCH3-205ENST00000433298 KDM2AQ9Y2K7 1162 aa10.98□□□□□ -0.65
LRCH3-205ENST00000433298 PCNTO95613 3336 aa10.98□□□□□ -0.65
LRCH3-205ENST00000433298 ADGRB1O14514 1584 aa10.98□□□□□ -0.65
LRCH3-205ENST00000433298 FAM161AQ3B820 660 aa10.97□□□□□ -0.65
LRCH3-205ENST00000433298 PLCD3Q8N3E9 789 aa10.97□□□□□ -0.65
LRCH3-205ENST00000433298 CD2APQ9Y5K6 639 aa10.97□□□□□ -0.65
LRCH3-205ENST00000433298 PPIP5K1Q6PFW1 1433 aa10.97□□□□□ -0.65
LRCH3-205ENST00000433298 SLC27A3Q5K4L6 730 aa10.96□□□□□ -0.65
LRCH3-205ENST00000433298 PCDH10Q9P2E7 1040 aa10.96□□□□□ -0.65
LRCH3-205ENST00000433298 CCDC61Q9Y6R9 512 aa10.96□□□□□ -0.65
LRCH3-205ENST00000433298 RBM46Q8TBY0 533 aaKnown RBP10.95□□□□□ -0.66
LRCH3-205ENST00000433298 DDX54Q8TDD1 881 aaKnown RBP10.95□□□□□ -0.66
LRCH3-205ENST00000433298 NLRP2Q9NX02 1062 aa10.95□□□□□ -0.66
LRCH3-205ENST00000433298 ZBTB47Q9UFB7 747 aaPredicted RBP10.95□□□□□ -0.66
LRCH3-205ENST00000433298 CPSF1Q10570 1443 aaKnown RBP10.94□□□□□ -0.66
LRCH3-205ENST00000433298 PLEKHG3A1L390 1219 aa10.94□□□□□ -0.66
LRCH3-205ENST00000433298 SMIM5Q71RC9 77 aa10.94□□□□□ -0.66
LRCH3-205ENST00000433298 CCNL1Q9UK58 526 aaPredicted RBP10.94□□□□□ -0.66
LRCH3-205ENST00000433298 SLIT3O75094 1523 aa10.94□□□□□ -0.66
LRCH3-205ENST00000433298 ABCC6O95255 1503 aa10.94□□□□□ -0.66
LRCH3-205ENST00000433298 SRPK2P78362 688 aaKnown RBP10.93□□□□□ -0.66
LRCH3-205ENST00000433298 MPHOSPH9Q99550 1183 aa10.93□□□□□ -0.66
LRCH3-205ENST00000433298 TRPM1Q7Z4N2 1603 aa10.93□□□□□ -0.66
LRCH3-205ENST00000433298 CCDC7Q96M83 1385 aa10.92□□□□□ -0.66
LRCH3-205ENST00000433298 PIK3C2AO00443 1686 aa10.92□□□□□ -0.66
LRCH3-205ENST00000433298 IL2RBP14784 551 aa10.92□□□□□ -0.66
LRCH3-205ENST00000433298 PRIM1P49642 420 aaKnown RBP10.92□□□□□ -0.66
LRCH3-205ENST00000433298 ARHGAP27Q6ZUM4 889 aa10.92□□□□□ -0.66
LRCH3-205ENST00000433298 ARHGEF25Q86VW2 580 aa10.92□□□□□ -0.66
LRCH3-205ENST00000433298 PHF12Q96QT6 1004 aa10.92□□□□□ -0.66
LRCH3-205ENST00000433298 CABP2Q9NPB3 220 aa10.92□□□□□ -0.66
LRCH3-205ENST00000433298 TSPYL2Q9H2G4 693 aaPredicted RBP10.91□□□□□ -0.66
LRCH3-205ENST00000433298 RRAGCQ9HB90 399 aa10.91□□□□□ -0.66
LRCH3-205ENST00000433298 BCS1LQ9Y276 419 aa10.91□□□□□ -0.66
LRCH3-205ENST00000433298 GALR2O43603 387 aaPredicted RBP10.9□□□□□ -0.66
LRCH3-205ENST00000433298 PHF14O94880 888 aa10.9□□□□□ -0.66
LRCH3-205ENST00000433298 FSTL1Q12841 308 aa10.9□□□□□ -0.66
LRCH3-205ENST00000433298 FBXO3Q9UK99 471 aa10.9□□□□□ -0.66
LRCH3-205ENST00000433298 KCPQ6ZWJ8 1503 aa10.89□□□□□ -0.67
LRCH3-205ENST00000433298 POTEIP0CG38 1075 aa10.89□□□□□ -0.67
LRCH3-205ENST00000433298 C9orf131Q5VYM1 1079 aa10.88□□□□□ -0.67
LRCH3-205ENST00000433298 LHX8Q68G74 356 aa10.88□□□□□ -0.67
LRCH3-205ENST00000433298 DCAF11Q8TEB1 546 aa10.88□□□□□ -0.67
LRCH3-205ENST00000433298 DOT1LQ8TEK3 1739 aa10.88□□□□□ -0.67
LRCH3-205ENST00000433298 CABP1Q9NZU7 370 aa10.88□□□□□ -0.67
LRCH3-205ENST00000433298 ERBB3P21860 1342 aa10.87□□□□□ -0.67
LRCH3-205ENST00000433298 LY75O60449 1722 aa10.87□□□□□ -0.67
LRCH3-205ENST00000433298 N4BP2Q86UW6 1770 aaPredicted RBP10.86□□□□□ -0.67
LRCH3-205ENST00000433298 A0A0G2JLW4 131 aa10.86□□□□□ -0.67
LRCH3-205ENST00000433298 AMIGO3Q86WK7 504 aa10.86□□□□□ -0.67
LRCH3-205ENST00000433298 CICQ96RK0 1608 aaPredicted RBP10.86□□□□□ -0.67
LRCH3-205ENST00000433298 FOXN1O15353 648 aa10.85□□□□□ -0.67
LRCH3-205ENST00000433298 KCNH5Q8NCM2 988 aa10.85□□□□□ -0.67
LRCH3-205ENST00000433298 SMC1BQ8NDV3 1235 aa10.85□□□□□ -0.67
LRCH3-205ENST00000433298 LTV1Q96GA3 475 aaPredicted RBP10.85□□□□□ -0.67
LRCH3-205ENST00000433298 MKRN1Q9UHC7 482 aaKnown RBP10.85□□□□□ -0.67
LRCH3-205ENST00000433298 NSD2O96028 1365 aa10.85□□□□□ -0.67
LRCH3-205ENST00000433298 FCHSD2O94868 740 aa10.84□□□□□ -0.67
LRCH3-205ENST00000433298 ANKRD24Q8TF21 1146 aa10.84□□□□□ -0.67
LRCH3-205ENST00000433298 C5P01031 1676 aa10.84□□□□□ -0.67
LRCH3-205ENST00000433298 ANKRD36BQ8N2N9 1353 aa10.83□□□□□ -0.68
LRCH3-205ENST00000433298 USP47Q96K76 1375 aa10.83□□□□□ -0.68
LRCH3-205ENST00000433298 RNF181Q9P0P0 153 aa10.83□□□□□ -0.68
LRCH3-205ENST00000433298 KDM2BQ8NHM5 1336 aa10.83□□□□□ -0.68
LRCH3-205ENST00000433298 PXDNLA1KZ92 1463 aa10.82□□□□□ -0.68
LRCH3-205ENST00000433298 AK7Q96M32 723 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms