RNA–Protein interactions for RNA: ENST00000433274.6

SF1-209, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-209ENST00000433274 ALS2Q96Q42 1657 aa19.41■□□□□ 0.7
SF1-209ENST00000433274 PHRF1Q9P1Y6 1649 aaKnown RBP19.41■□□□□ 0.7
SF1-209ENST00000433274 ATF7IPQ6VMQ6 1270 aa19.41■□□□□ 0.7
SF1-209ENST00000433274 LRRC59Q96AG4 307 aaKnown RBP19.41■□□□□ 0.7
SF1-209ENST00000433274 CHL1O00533 1208 aa19.41■□□□□ 0.7
SF1-209ENST00000433274 MS4A1P11836 297 aa19.41■□□□□ 0.7
SF1-209ENST00000433274 ZC3H6P61129 1189 aaKnown RBP19.4■□□□□ 0.7
SF1-209ENST00000433274 CRB1P82279 1406 aa19.4■□□□□ 0.7
SF1-209ENST00000433274 MVPQ14764 893 aaKnown RBP19.4■□□□□ 0.7
SF1-209ENST00000433274 TCERG1O14776 1098 aaKnown RBP19.39■□□□□ 0.69
SF1-209ENST00000433274 IPO8O15397 1037 aaKnown RBP19.39■□□□□ 0.69
SF1-209ENST00000433274 MED1Q15648 1581 aaPredicted RBP19.39■□□□□ 0.69
SF1-209ENST00000433274 GNAT3A8MTJ3 354 aa19.39■□□□□ 0.69
SF1-209ENST00000433274 BRINP3Q76B58 766 aa19.39■□□□□ 0.69
SF1-209ENST00000433274 SKAP1Q86WV1 359 aa19.39■□□□□ 0.69
SF1-209ENST00000433274 AXIN2Q9Y2T1 843 aa19.39■□□□□ 0.69
SF1-209ENST00000433274 KRT24Q2M2I5 525 aa19.38■□□□□ 0.69
SF1-209ENST00000433274 ANKRD24Q8TF21 1146 aa19.38■□□□□ 0.69
SF1-209ENST00000433274 MIS18AQ9NYP9 233 aa19.38■□□□□ 0.69
SF1-209ENST00000433274 MRPL50Q8N5N7 158 aaKnown RBP19.37■□□□□ 0.69
SF1-209ENST00000433274 TNS3Q68CZ2 1445 aa19.37■□□□□ 0.69
SF1-209ENST00000433274 CABLES1Q8TDN4 633 aa19.37■□□□□ 0.69
SF1-209ENST00000433274 PXDNQ92626 1479 aa19.36■□□□□ 0.69
SF1-209ENST00000433274 HTATSF1O43719 755 aaKnown RBP19.36■□□□□ 0.69
SF1-209ENST00000433274 BRPF1P55201 1214 aaPredicted RBP19.36■□□□□ 0.69
SF1-209ENST00000433274 AAMPQ13685 434 aa19.36■□□□□ 0.69
SF1-209ENST00000433274 MAP3K5Q99683 1374 aa19.36■□□□□ 0.69
SF1-209ENST00000433274 IGHDP01880 384 aa19.36■□□□□ 0.69
SF1-209ENST00000433274 ITPRIPQ8IWB1 547 aa19.36■□□□□ 0.69
SF1-209ENST00000433274 RGPD2P0DJD1 1756 aa19.35■□□□□ 0.69
SF1-209ENST00000433274 SLAIN2Q9P270 581 aa19.35■□□□□ 0.69
SF1-209ENST00000433274 TSPYL4Q9UJ04 414 aa19.35■□□□□ 0.69
SF1-209ENST00000433274 SPATA31A3Q5VYP0 1347 aa19.35■□□□□ 0.69
SF1-209ENST00000433274 TMEM57Q8N5G2 664 aa19.34■□□□□ 0.69
SF1-209ENST00000433274 IL17REQ8NFR9 667 aa19.33■□□□□ 0.69
SF1-209ENST00000433274 PCDHB15Q9Y5E8 787 aa19.33■□□□□ 0.69
SF1-209ENST00000433274 KIAA0232Q92628 1395 aa19.33■□□□□ 0.68
SF1-209ENST00000433274 DDX19BQ9UMR2 479 aa19.33■□□□□ 0.68
SF1-209ENST00000433274 HAP1P54257 671 aaPredicted RBP19.31■□□□□ 0.68
SF1-209ENST00000433274 ERBB3P21860 1342 aa19.31■□□□□ 0.68
SF1-209ENST00000433274 ARHGAP45Q92619 1136 aa19.3■□□□□ 0.68
SF1-209ENST00000433274 LRRC37A3O60309 1634 aa19.3■□□□□ 0.68
SF1-209ENST00000433274 PLEKHO1Q53GL0 409 aaPredicted RBP19.29■□□□□ 0.68
SF1-209ENST00000433274 RGPD5Q99666 1765 aa19.29■□□□□ 0.68
SF1-209ENST00000433274 NCAPD2Q15021 1401 aa19.29■□□□□ 0.68
SF1-209ENST00000433274 CHRNA2Q15822 529 aa19.29■□□□□ 0.68
SF1-209ENST00000433274 ZNF530Q6P9A1 599 aaPredicted RBP19.29■□□□□ 0.68
SF1-209ENST00000433274 TAF7Q15545 349 aaPredicted RBP19.27■□□□□ 0.68
SF1-209ENST00000433274 AMOTQ4VCS5 1084 aa19.26■□□□□ 0.67
SF1-209ENST00000433274 NLRP2Q9NX02 1062 aa19.26■□□□□ 0.67
SF1-209ENST00000433274 SOS2Q07890 1332 aaPredicted RBP19.26■□□□□ 0.67
SF1-209ENST00000433274 LGR6Q9HBX8 967 aa19.26■□□□□ 0.67
SF1-209ENST00000433274 AKAP4Q5JQC9 854 aa19.25■□□□□ 0.67
SF1-209ENST00000433274 API5Q9BZZ5 524 aaKnown RBP19.25■□□□□ 0.67
SF1-209ENST00000433274 RWDD1Q9H446 243 aaPredicted RBP19.25■□□□□ 0.67
SF1-209ENST00000433274 CAMTA1Q9Y6Y1 1673 aa19.25■□□□□ 0.67
SF1-209ENST00000433274 CSB-PGBD3P0DP91 1061 aa19.25■□□□□ 0.67
SF1-209ENST00000433274 RGS3P49796 1198 aa19.25■□□□□ 0.67
SF1-209ENST00000433274 ZBTB40Q9NUA8 1239 aa19.25■□□□□ 0.67
SF1-209ENST00000433274 CEMIPQ8WUJ3 1361 aa19.25■□□□□ 0.67
SF1-209ENST00000433274 ABCC4O15439 1325 aa19.25■□□□□ 0.67
SF1-209ENST00000433274 C1orf141Q5JVX7 400 aa19.24■□□□□ 0.67
SF1-209ENST00000433274 CRYBG1Q9Y4K1 1723 aa19.23■□□□□ 0.67
SF1-209ENST00000433274 MPRIPQ6WCQ1 1025 aa19.23■□□□□ 0.67
SF1-209ENST00000433274 COL18A1P39060 1754 aa19.23■□□□□ 0.67
SF1-209ENST00000433274 SLC4A2P04920 1241 aa19.23■□□□□ 0.67
SF1-209ENST00000433274 BABAM1Q9NWV8 329 aa19.23■□□□□ 0.67
SF1-209ENST00000433274 CPDO75976 1380 aa19.22■□□□□ 0.67
SF1-209ENST00000433274 PDE4AP27815 886 aa19.22■□□□□ 0.67
SF1-209ENST00000433274 RAPGEF4Q8WZA2 1011 aa19.22■□□□□ 0.67
SF1-209ENST00000433274 LMO7Q8WWI1 1683 aa19.21■□□□□ 0.67
SF1-209ENST00000433274 ZBTB7BO15156 539 aaPredicted RBP19.2■□□□□ 0.66
SF1-209ENST00000433274 TEFQ10587 303 aa19.2■□□□□ 0.66
SF1-209ENST00000433274 RNMTO43148 476 aaKnown RBP19.19■□□□□ 0.66
SF1-209ENST00000433274 PRDM11Q9NQV5 511 aa19.19■□□□□ 0.66
SF1-209ENST00000433274 NECTIN2Q92692 538 aa19.19■□□□□ 0.66
SF1-209ENST00000433274 PTPRCP08575 1304 aa19.19■□□□□ 0.66
SF1-209ENST00000433274 ABCC6O95255 1503 aa19.18■□□□□ 0.66
SF1-209ENST00000433274 STK31Q9BXU1 1019 aa19.18■□□□□ 0.66
SF1-209ENST00000433274 CHMP4BQ9H444 224 aaKnown RBP19.18■□□□□ 0.66
SF1-209ENST00000433274 TATP17735 454 aaPredicted RBP19.18■□□□□ 0.66
SF1-209ENST00000433274 HDAC1Q13547 482 aaPredicted RBP19.18■□□□□ 0.66
SF1-209ENST00000433274 BACH2Q9BYV9 841 aa19.18■□□□□ 0.66
SF1-209ENST00000433274 RGS12O14924 1447 aa19.18■□□□□ 0.66
SF1-209ENST00000433274 G2E3Q7L622 706 aa19.17■□□□□ 0.66
SF1-209ENST00000433274 CCDC30Q5VVM6 783 aa19.17■□□□□ 0.66
SF1-209ENST00000433274 BTBD11A6QL63 1104 aa19.16■□□□□ 0.66
SF1-209ENST00000433274 C1orf115Q9H7X2 142 aa19.16■□□□□ 0.66
SF1-209ENST00000433274 PDZRN3Q9UPQ7 1066 aa19.16■□□□□ 0.66
SF1-209ENST00000433274 FAM208AQ9UK61 1670 aaKnown RBP19.16■□□□□ 0.66
SF1-209ENST00000433274 MEGF6O75095 1541 aa19.16■□□□□ 0.66
SF1-209ENST00000433274 KCNQ3O43525 872 aa19.15■□□□□ 0.66
SF1-209ENST00000433274 INTS3Q68E01 1043 aaKnown RBP19.15■□□□□ 0.66
SF1-209ENST00000433274 SOS1Q07889 1333 aaPredicted RBP19.14■□□□□ 0.66
SF1-209ENST00000433274 EIF4A1P60842 406 aaKnown RBP19.14■□□□□ 0.66
SF1-209ENST00000433274 SPG7Q9UQ90 795 aa19.14■□□□□ 0.65
SF1-209ENST00000433274 NHSL1Q5SYE7 1610 aa19.14■□□□□ 0.65
SF1-209ENST00000433274 HDGFL1Q5TGJ6 251 aa19.13■□□□□ 0.65
SF1-209ENST00000433274 OVOS2A0A0G2JMS6 1433 aa19.13■□□□□ 0.65
SF1-209ENST00000433274 F6X3S4 739 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms