RNA–Protein interactions for RNA: ENST00000432907.6

PKNOX1-203, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2 BASIC

Gene PKNOX1, Length 5,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-203ENST00000432907 RNF187Q5TA31 235 aaPredicted RBP12.26□□□□□ -0.45
PKNOX1-203ENST00000432907 RALYLQ86SE5 291 aaKnown RBP12.26□□□□□ -0.45
PKNOX1-203ENST00000432907 ZNHIT6Q9NWK9 470 aaKnown RBP12.26□□□□□ -0.45
PKNOX1-203ENST00000432907 WDR62O43379 1518 aa12.26□□□□□ -0.45
PKNOX1-203ENST00000432907 PRIM1P49642 420 aaKnown RBP12.26□□□□□ -0.45
PKNOX1-203ENST00000432907 SNW1Q13573 536 aaKnown RBP12.26□□□□□ -0.45
PKNOX1-203ENST00000432907 NUTM2DQ5VT03 806 aaPredicted RBP12.26□□□□□ -0.45
PKNOX1-203ENST00000432907 PPP6R1Q9UPN7 881 aa12.26□□□□□ -0.45
PKNOX1-203ENST00000432907 MAP3K1Q13233 1512 aa12.26□□□□□ -0.45
PKNOX1-203ENST00000432907 FAM69CQ0P6D2 419 aa12.26□□□□□ -0.45
PKNOX1-203ENST00000432907 ANKRD1Q15327 319 aa12.26□□□□□ -0.45
PKNOX1-203ENST00000432907 FERMT3Q86UX7 667 aa12.26□□□□□ -0.45
PKNOX1-203ENST00000432907 FSD1Q9BTV5 496 aa12.26□□□□□ -0.45
PKNOX1-203ENST00000432907 CLASRPQ8N2M8 674 aaKnown RBP12.26□□□□□ -0.45
PKNOX1-203ENST00000432907 RSPH14Q9UHP6 348 aa12.26□□□□□ -0.45
PKNOX1-203ENST00000432907 NOL7Q9UMY1 257 aaKnown RBP12.26□□□□□ -0.45
PKNOX1-203ENST00000432907 EPRSP07814 1512 aaKnown RBP12.26□□□□□ -0.45
PKNOX1-203ENST00000432907 MICALCLQ6ZW33 695 aa12.25□□□□□ -0.45
PKNOX1-203ENST00000432907 CKAP2LQ8IYA6 745 aa12.25□□□□□ -0.45
PKNOX1-203ENST00000432907 JMYQ8N9B5 988 aa12.25□□□□□ -0.45
PKNOX1-203ENST00000432907 ZSCAN31Q96LW9 406 aaPredicted RBP12.25□□□□□ -0.45
PKNOX1-203ENST00000432907 ARHGAP5Q13017 1502 aa12.25□□□□□ -0.45
PKNOX1-203ENST00000432907 TTC31Q49AM3 519 aaPredicted RBP12.25□□□□□ -0.45
PKNOX1-203ENST00000432907 GNAI3P08754 354 aa12.25□□□□□ -0.45
PKNOX1-203ENST00000432907 HMOX1P09601 288 aa12.25□□□□□ -0.45
PKNOX1-203ENST00000432907 NF2P35240 595 aa12.25□□□□□ -0.45
PKNOX1-203ENST00000432907 KIF4BQ2VIQ3 1234 aa12.25□□□□□ -0.45
PKNOX1-203ENST00000432907 EPB41L2O43491 1005 aaKnown RBP12.24□□□□□ -0.45
PKNOX1-203ENST00000432907 IGHDP01880 384 aa12.24□□□□□ -0.45
PKNOX1-203ENST00000432907 ZNF397Q8NF99 534 aaPredicted RBP12.24□□□□□ -0.45
PKNOX1-203ENST00000432907 DACH1Q9UI36 760 aa12.24□□□□□ -0.45
PKNOX1-203ENST00000432907 ERLIN2O94905 339 aa12.24□□□□□ -0.45
PKNOX1-203ENST00000432907 PIP4K2AP48426 406 aaPredicted RBP12.24□□□□□ -0.45
PKNOX1-203ENST00000432907 ANO10Q9NW15 660 aa12.24□□□□□ -0.45
PKNOX1-203ENST00000432907 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.24□□□□□ -0.45
PKNOX1-203ENST00000432907 V9GYY5 206 aaPredicted RBP12.24□□□□□ -0.45
PKNOX1-203ENST00000432907 SUPT6HQ7KZ85 1726 aaKnown RBP12.24□□□□□ -0.45
PKNOX1-203ENST00000432907 TDO2P48775 406 aa12.24□□□□□ -0.45
PKNOX1-203ENST00000432907 GSDMDP57764 484 aa12.24□□□□□ -0.45
PKNOX1-203ENST00000432907 COG3Q96JB2 828 aa12.24□□□□□ -0.45
PKNOX1-203ENST00000432907 PDRG1Q9NUG6 133 aa12.24□□□□□ -0.45
PKNOX1-203ENST00000432907 CCDC171Q6TFL3 1326 aa12.24□□□□□ -0.45
PKNOX1-203ENST00000432907 ATP2B1P20020 1258 aa12.24□□□□□ -0.45
PKNOX1-203ENST00000432907 CCDC148Q8NFR7 591 aa12.24□□□□□ -0.45
PKNOX1-203ENST00000432907 LTV1Q96GA3 475 aaPredicted RBP12.24□□□□□ -0.45
PKNOX1-203ENST00000432907 NEXNQ0ZGT2 675 aa12.23□□□□□ -0.45
PKNOX1-203ENST00000432907 TWISTNBQ3B726 338 aaPredicted RBP12.23□□□□□ -0.45
PKNOX1-203ENST00000432907 TAX1BP1Q86VP1 789 aa12.23□□□□□ -0.45
PKNOX1-203ENST00000432907 LRPPRCP42704 1394 aaKnown RBP12.23□□□□□ -0.45
PKNOX1-203ENST00000432907 KIF5CO60282 957 aa12.23□□□□□ -0.45
PKNOX1-203ENST00000432907 TMEM57Q8N5G2 664 aa12.23□□□□□ -0.45
PKNOX1-203ENST00000432907 SCAND2PQ9GZW5 306 aaPredicted RBP12.23□□□□□ -0.45
PKNOX1-203ENST00000432907 ZNF644Q9H582 1327 aaPredicted RBP12.23□□□□□ -0.45
PKNOX1-203ENST00000432907 ARFGAP3Q9NP61 516 aa12.23□□□□□ -0.45
PKNOX1-203ENST00000432907 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.23□□□□□ -0.453e-6■■■■□ 21.7
PKNOX1-203ENST00000432907 RBM33Q96EV2 1170 aaKnown RBP12.22□□□□□ -0.45
PKNOX1-203ENST00000432907 MAGEC2Q9UBF1 373 aaPredicted RBP12.22□□□□□ -0.45
PKNOX1-203ENST00000432907 TSPYL4Q9UJ04 414 aa12.22□□□□□ -0.45
PKNOX1-203ENST00000432907 POTEB2H3BUK9 544 aa12.22□□□□□ -0.45
PKNOX1-203ENST00000432907 MCM3P25205 808 aa12.22□□□□□ -0.45
PKNOX1-203ENST00000432907 CCDC186Q7Z3E2 898 aa12.22□□□□□ -0.45
PKNOX1-203ENST00000432907 JAKMIP1Q96N16 626 aaKnown RBP12.22□□□□□ -0.45
PKNOX1-203ENST00000432907 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.22□□□□□ -0.451e-6■■■□□ 18.4
PKNOX1-203ENST00000432907 PCF11O94913 1555 aaKnown RBP12.22□□□□□ -0.45
PKNOX1-203ENST00000432907 HIP1O00291 1037 aa12.22□□□□□ -0.45
PKNOX1-203ENST00000432907 U2AF2P26368 475 aaKnown RBP eCLIP12.22□□□□□ -0.45
PKNOX1-203ENST00000432907 GABPB1Q06547 395 aaPredicted RBP12.22□□□□□ -0.45
PKNOX1-203ENST00000432907 VPS53Q5VIR6 699 aa12.22□□□□□ -0.45
PKNOX1-203ENST00000432907 STK11IPQ8N1F8 1099 aa12.22□□□□□ -0.45
PKNOX1-203ENST00000432907 DHX16O60231 1041 aaKnown RBP12.22□□□□□ -0.45
PKNOX1-203ENST00000432907 KDM4AO75164 1064 aa12.22□□□□□ -0.45
PKNOX1-203ENST00000432907 CAPN2P17655 700 aa12.22□□□□□ -0.45
PKNOX1-203ENST00000432907 ZNF165P49910 485 aa12.22□□□□□ -0.45
PKNOX1-203ENST00000432907 HSP90AB2PQ58FF8 381 aa12.22□□□□□ -0.45
PKNOX1-203ENST00000432907 MICALL1Q8N3F8 863 aa12.22□□□□□ -0.45
PKNOX1-203ENST00000432907 SLU7O95391 586 aaKnown RBP12.21□□□□□ -0.45
PKNOX1-203ENST00000432907 GNAI2P04899 355 aa12.21□□□□□ -0.45
PKNOX1-203ENST00000432907 RARSP54136 660 aaKnown RBP12.21□□□□□ -0.45
PKNOX1-203ENST00000432907 CCDC91Q7Z6B0 441 aa12.21□□□□□ -0.45
PKNOX1-203ENST00000432907 BLOC1S2Q6QNY1 142 aa12.21□□□□□ -0.46
PKNOX1-203ENST00000432907 CCDC83Q8IWF9 413 aa12.21□□□□□ -0.46
PKNOX1-203ENST00000432907 MYRIPQ8NFW9 859 aa12.21□□□□□ -0.46
PKNOX1-203ENST00000432907 PLEKHH1Q9ULM0 1364 aa12.21□□□□□ -0.46
PKNOX1-203ENST00000432907 TOP1P11387 765 aaKnown RBP12.21□□□□□ -0.46
PKNOX1-203ENST00000432907 GBP2P32456 591 aaPredicted RBP12.2□□□□□ -0.46
PKNOX1-203ENST00000432907 GGNBP2Q9H3C7 697 aa12.2□□□□□ -0.46
PKNOX1-203ENST00000432907 ERICH2A1L162 156 aa12.2□□□□□ -0.46
PKNOX1-203ENST00000432907 UBE2HP62256 183 aa12.2□□□□□ -0.46
PKNOX1-203ENST00000432907 RAB3GAP1Q15042 981 aa12.2□□□□□ -0.46
PKNOX1-203ENST00000432907 DUSP27Q5VZP5 1158 aa12.2□□□□□ -0.46
PKNOX1-203ENST00000432907 GIMAP6Q6P9H5 292 aa12.2□□□□□ -0.46
PKNOX1-203ENST00000432907 TMX1Q9H3N1 280 aa12.2□□□□□ -0.46
PKNOX1-203ENST00000432907 ENOX2Q16206 610 aaKnown RBP12.2□□□□□ -0.46
PKNOX1-203ENST00000432907 DDX19AQ9NUU7 478 aaKnown RBP12.2□□□□□ -0.46
PKNOX1-203ENST00000432907 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.2□□□□□ -0.465e-8■■■■■ 30.4
PKNOX1-203ENST00000432907 ADAMTS12P58397 1594 aa12.2□□□□□ -0.46
PKNOX1-203ENST00000432907 ANKRD50Q9ULJ7 1429 aa12.19□□□□□ -0.46
PKNOX1-203ENST00000432907 EPS15P42566 896 aa12.19□□□□□ -0.46
PKNOX1-203ENST00000432907 TEFQ10587 303 aa12.19□□□□□ -0.46
PKNOX1-203ENST00000432907 NKTRP30414 1462 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 1095.5 ms