RNA–Protein interactions for RNA: ENST00000432877.5

CNOT9-204, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-204ENST00000432877 FBLN1P23142 703 aa24.6■■□□□ 1.53
CNOT9-204ENST00000432877 FAM208AQ9UK61 1670 aaKnown RBP24.59■■□□□ 1.53
CNOT9-204ENST00000432877 FYB1O15117 783 aa24.59■■□□□ 1.53
CNOT9-204ENST00000432877 TMF1P82094 1093 aa24.59■■□□□ 1.53
CNOT9-204ENST00000432877 NBPF6Q5VWK0 638 aa24.58■■□□□ 1.53
CNOT9-204ENST00000432877 NBPF4Q96M43 638 aa24.58■■□□□ 1.53
CNOT9-204ENST00000432877 CCNL1Q9UK58 526 aaPredicted RBP24.58■■□□□ 1.53
CNOT9-204ENST00000432877 CDCA8Q53HL2 280 aa24.57■■□□□ 1.52
CNOT9-204ENST00000432877 RAPGEF4Q8WZA2 1011 aa24.57■■□□□ 1.52
CNOT9-204ENST00000432877 NSD2O96028 1365 aa24.56■■□□□ 1.52
CNOT9-204ENST00000432877 RRS1Q15050 365 aaKnown RBP24.56■■□□□ 1.52
CNOT9-204ENST00000432877 USP47Q96K76 1375 aa24.55■■□□□ 1.52
CNOT9-204ENST00000432877 UTRNP46939 3433 aa24.55■■□□□ 1.52
CNOT9-204ENST00000432877 KCNQ4P56696 695 aa24.55■■□□□ 1.52
CNOT9-204ENST00000432877 KAT6BQ8WYB5 2073 aa24.55■■□□□ 1.52
CNOT9-204ENST00000432877 SMG6Q86US8 1419 aaKnown RBP24.54■■□□□ 1.52
CNOT9-204ENST00000432877 TATP17735 454 aaPredicted RBP24.54■■□□□ 1.52
CNOT9-204ENST00000432877 GGNBP2Q9H3C7 697 aa24.54■■□□□ 1.52
CNOT9-204ENST00000432877 KLHL34Q8N239 644 aa24.53■■□□□ 1.52
CNOT9-204ENST00000432877 KIF24Q5T7B8 1368 aa24.53■■□□□ 1.52
CNOT9-204ENST00000432877 MEGF6O75095 1541 aa24.52■■□□□ 1.52
CNOT9-204ENST00000432877 INSRP06213 1382 aa24.51■■□□□ 1.51
CNOT9-204ENST00000432877 QSER1Q2KHR3 1735 aa24.5■■□□□ 1.51
CNOT9-204ENST00000432877 C1QTNF8P60827 252 aa24.5■■□□□ 1.51
CNOT9-204ENST00000432877 FLAD1Q8NFF5 587 aa24.5■■□□□ 1.51
CNOT9-204ENST00000432877 MSH5O43196 834 aa24.49■■□□□ 1.51
CNOT9-204ENST00000432877 GRIN3BO60391 1043 aa24.49■■□□□ 1.51
CNOT9-204ENST00000432877 HSP90AB2PQ58FF8 381 aa24.49■■□□□ 1.51
CNOT9-204ENST00000432877 COL23A1Q86Y22 540 aaPredicted RBP24.49■■□□□ 1.51
CNOT9-204ENST00000432877 PCDH11XQ9BZA7 1347 aa24.49■■□□□ 1.51
CNOT9-204ENST00000432877 PCDH11YQ9BZA8 1340 aa24.49■■□□□ 1.51
CNOT9-204ENST00000432877 USHBP1Q8N6Y0 703 aa24.48■■□□□ 1.51
CNOT9-204ENST00000432877 FLT4P35916 1363 aa24.47■■□□□ 1.51
CNOT9-204ENST00000432877 PELP1Q8IZL8 1130 aaKnown RBP24.46■■□□□ 1.51
CNOT9-204ENST00000432877 NLGN2Q8NFZ4 835 aa24.45■■□□□ 1.5
CNOT9-204ENST00000432877 SMARCC1Q92922 1105 aaPredicted RBP24.45■■□□□ 1.5
CNOT9-204ENST00000432877 CHD4Q14839 1912 aa24.45■■□□□ 1.5
CNOT9-204ENST00000432877 COL24A1Q17RW2 1714 aa24.44■■□□□ 1.5
CNOT9-204ENST00000432877 LY75O60449 1722 aa24.44■■□□□ 1.5
CNOT9-204ENST00000432877 DOT1LQ8TEK3 1739 aa24.42■■□□□ 1.5
CNOT9-204ENST00000432877 MPRIPQ6WCQ1 1025 aa24.42■■□□□ 1.5
CNOT9-204ENST00000432877 CD2APQ9Y5K6 639 aa24.42■■□□□ 1.5
CNOT9-204ENST00000432877 SENP3-EIF4A1A0A087X0R7 540 aa24.41■■□□□ 1.5
CNOT9-204ENST00000432877 CYP27B1O15528 508 aa24.41■■□□□ 1.5
CNOT9-204ENST00000432877 PALLDQ8WX93 1383 aa24.41■■□□□ 1.5
CNOT9-204ENST00000432877 NKX1-1Q15270 411 aaPredicted RBP24.4■■□□□ 1.5
CNOT9-204ENST00000432877 SHANK3Q9BYB0 1731 aa24.39■■□□□ 1.5
CNOT9-204ENST00000432877 GIGYF1O75420 1035 aaPredicted RBP24.39■■□□□ 1.49
CNOT9-204ENST00000432877 CARD14Q9BXL6 1004 aa24.39■■□□□ 1.49
CNOT9-204ENST00000432877 SPG7Q9UQ90 795 aa24.38■■□□□ 1.49
CNOT9-204ENST00000432877 YBX3P16989 372 aaKnown RBP eCLIP24.37■■□□□ 1.49
CNOT9-204ENST00000432877 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.37■■□□□ 1.49
CNOT9-204ENST00000432877 RGPD2P0DJD1 1756 aa24.37■■□□□ 1.49
CNOT9-204ENST00000432877 MSL1Q68DK7 614 aa24.36■■□□□ 1.49
CNOT9-204ENST00000432877 TIMELESSQ9UNS1 1208 aa24.36■■□□□ 1.49
CNOT9-204ENST00000432877 EMILIN1Q9Y6C2 1016 aa24.36■■□□□ 1.49
CNOT9-204ENST00000432877 WASHC2AQ641Q2 1341 aa24.35■■□□□ 1.49
CNOT9-204ENST00000432877 AK7Q96M32 723 aa24.35■■□□□ 1.49
CNOT9-204ENST00000432877 PIGBQ92521 554 aa24.34■■□□□ 1.49
CNOT9-204ENST00000432877 NSD3Q9BZ95 1437 aa24.34■■□□□ 1.49
CNOT9-204ENST00000432877 PPM1GO15355 546 aaPredicted RBP24.32■■□□□ 1.48
CNOT9-204ENST00000432877 TUBGCP6Q96RT7 1819 aa24.32■■□□□ 1.48
CNOT9-204ENST00000432877 TRIM26Q12899 539 aaPredicted RBP24.31■■□□□ 1.48
CNOT9-204ENST00000432877 NCAPD2Q15021 1401 aa24.31■■□□□ 1.48
CNOT9-204ENST00000432877 SSFA2P28290 1259 aa24.3■■□□□ 1.48
CNOT9-204ENST00000432877 LOC102724428A0A0B4J2F2 783 aa24.29■■□□□ 1.48
CNOT9-204ENST00000432877 SIK1P57059 783 aa24.29■■□□□ 1.48
CNOT9-204ENST00000432877 EYA1Q99502 592 aa24.29■■□□□ 1.48
CNOT9-204ENST00000432877 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.28■■□□□ 1.48
CNOT9-204ENST00000432877 IFNL2Q8IZJ0 200 aa24.28■■□□□ 1.48
CNOT9-204ENST00000432877 TMOD3Q9NYL9 352 aa24.28■■□□□ 1.48
CNOT9-204ENST00000432877 GOLGB1Q14789 3259 aaKnown RBP24.28■■□□□ 1.48
CNOT9-204ENST00000432877 POLKQ9UBT6 870 aa24.26■■□□□ 1.47
CNOT9-204ENST00000432877 C5P01031 1676 aa24.26■■□□□ 1.47
CNOT9-204ENST00000432877 PLEKHG2Q9H7P9 1386 aa24.26■■□□□ 1.47
CNOT9-204ENST00000432877 PHF14O94880 888 aa24.24■■□□□ 1.47
CNOT9-204ENST00000432877 PHKG2P15735 406 aa24.24■■□□□ 1.47
CNOT9-204ENST00000432877 KIF20BQ96Q89 1820 aa24.24■■□□□ 1.47
CNOT9-204ENST00000432877 ATP6V1AP38606 617 aa24.23■■□□□ 1.47
CNOT9-204ENST00000432877 AMIGO3Q86WK7 504 aa24.23■■□□□ 1.47
CNOT9-204ENST00000432877 LINC00116Q8NCU8 138 aa24.23■■□□□ 1.47
CNOT9-204ENST00000432877 C4BP0C0L5 1744 aa24.22■■□□□ 1.47
CNOT9-204ENST00000432877 ASAP1Q9ULH1 1129 aa24.22■■□□□ 1.47
CNOT9-204ENST00000432877 GPBP1L1Q9HC44 474 aaPredicted RBP24.21■■□□□ 1.47
CNOT9-204ENST00000432877 PKD1L3Q7Z443 1732 aa24.21■■□□□ 1.47
CNOT9-204ENST00000432877 ATP10DQ9P241 1426 aa24.2■■□□□ 1.46
CNOT9-204ENST00000432877 IGSF1Q8N6C5 1336 aa24.2■■□□□ 1.46
CNOT9-204ENST00000432877 HSP90AB1P08238 724 aaKnown RBP24.2■■□□□ 1.46
CNOT9-204ENST00000432877 ATG3Q9NT62 314 aa24.2■■□□□ 1.46
CNOT9-204ENST00000432877 ERVV-2B6SEH9 535 aa24.19■■□□□ 1.46
CNOT9-204ENST00000432877 GNPATO15228 680 aa24.19■■□□□ 1.46
CNOT9-204ENST00000432877 ITPK1Q13572 414 aa24.19■■□□□ 1.46
CNOT9-204ENST00000432877 EIF4A2Q14240 407 aaKnown RBP24.19■■□□□ 1.46
CNOT9-204ENST00000432877 CLSPNQ9HAW4 1339 aa24.18■■□□□ 1.46
CNOT9-204ENST00000432877 TAF1LQ8IZX4 1826 aa24.18■■□□□ 1.46
CNOT9-204ENST00000432877 SMIM5Q71RC9 77 aa24.17■■□□□ 1.46
CNOT9-204ENST00000432877 TOGARAM1Q9Y4F4 1720 aa24.16■■□□□ 1.46
CNOT9-204ENST00000432877 TRAPPC3LQ5T215 181 aa24.16■■□□□ 1.46
CNOT9-204ENST00000432877 RTCBQ9Y3I0 505 aaKnown RBP24.16■■□□□ 1.46
CNOT9-204ENST00000432877 PLEKHO1Q53GL0 409 aaPredicted RBP24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms