RNA–Protein interactions for RNA: ENST00000432606.1

RGPD5-206, Transcript of RANBP2-like and GRIP domain containing 5, human

TSL 4

Gene RGPD5, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RGPD5-206	ENST00000432606	NBPF4	Q96M43	638 aa		28.93	■■■□□ 2.22
RGPD5-206	ENST00000432606	KAT6B	Q8WYB5	2073 aa		28.93	■■■□□ 2.22
RGPD5-206	ENST00000432606	RGPD3	A6NKT7	1758 aa	Predicted RBP	28.93	■■■□□ 2.22
RGPD5-206	ENST00000432606	RGPD4	Q7Z3J3	1758 aa		28.93	■■■□□ 2.22
RGPD5-206	ENST00000432606	AMER1	Q5JTC6	1135 aa	Predicted RBP	28.89	■■■□□ 2.22
RGPD5-206	ENST00000432606	RAPGEF4	Q8WZA2	1011 aa		28.89	■■■□□ 2.22
RGPD5-206	ENST00000432606	BCL11B	Q9C0K0	894 aa	Predicted RBP	28.89	■■■□□ 2.22
RGPD5-206	ENST00000432606	ANO8	Q9HCE9	1232 aa	Predicted RBP	28.88	■■■□□ 2.21
RGPD5-206	ENST00000432606	PER1	O15534	1290 aa	Predicted RBP	28.87	■■■□□ 2.21
RGPD5-206	ENST00000432606	USHBP1	Q8N6Y0	703 aa		28.87	■■■□□ 2.21
RGPD5-206	ENST00000432606	CASZ1	Q86V15	1759 aa		28.86	■■■□□ 2.21
RGPD5-206	ENST00000432606	TAT	P17735	454 aa	Predicted RBP	28.86	■■■□□ 2.21
RGPD5-206	ENST00000432606	ZCRB1	Q8TBF4	217 aa	Known RBP	28.85	■■■□□ 2.21
RGPD5-206	ENST00000432606	PROM2	Q8N271	834 aa		28.84	■■■□□ 2.21
RGPD5-206	ENST00000432606	DDX54	Q8TDD1	881 aa	Known RBP	28.84	■■■□□ 2.21
RGPD5-206	ENST00000432606	MEGF6	O75095	1541 aa		28.84	■■■□□ 2.21
RGPD5-206	ENST00000432606	ZNF784	Q8NCA9	323 aa	Predicted RBP	28.83	■■■□□ 2.21
RGPD5-206	ENST00000432606	PTGER2	P43116	358 aa		28.82	■■■□□ 2.2
RGPD5-206	ENST00000432606	PDGFD	Q9GZP0	370 aa	Predicted RBP	28.81	■■■□□ 2.2
RGPD5-206	ENST00000432606	NPC1L1	Q9UHC9	1359 aa		28.8	■■■□□ 2.2
RGPD5-206	ENST00000432606	CC2D1B	Q5T0F9	858 aa	Known RBP	28.8	■■■□□ 2.2
RGPD5-206	ENST00000432606	NHS	Q6T4R5	1651 aa		28.8	■■■□□ 2.2
RGPD5-206	ENST00000432606	ZBTB7A	O95365	584 aa		28.79	■■■□□ 2.2
RGPD5-206	ENST00000432606	EIF4A2	Q14240	407 aa	Known RBP	28.79	■■■□□ 2.2
RGPD5-206	ENST00000432606	PTF1A	Q7RTS3	328 aa		28.79	■■■□□ 2.2
RGPD5-206	ENST00000432606	SHANK3	Q9BYB0	1731 aa		28.78	■■■□□ 2.2
RGPD5-206	ENST00000432606	EYA1	Q99502	592 aa		28.78	■■■□□ 2.2
RGPD5-206	ENST00000432606	ACSBG1	Q96GR2	724 aa		28.77	■■■□□ 2.2
RGPD5-206	ENST00000432606	NCAPD2	Q15021	1401 aa		28.77	■■■□□ 2.2
RGPD5-206	ENST00000432606	PCDH11X	Q9BZA7	1347 aa		28.74	■■■□□ 2.19
RGPD5-206	ENST00000432606	PCDH11Y	Q9BZA8	1340 aa		28.74	■■■□□ 2.19
RGPD5-206	ENST00000432606	SYT17	Q9BSW7	474 aa		28.74	■■■□□ 2.19
RGPD5-206	ENST00000432606	STK32B	Q9NY57	414 aa		28.74	■■■□□ 2.19
RGPD5-206	ENST00000432606	ATF5	Q9Y2D1	282 aa	Predicted RBP	28.74	■■■□□ 2.19
RGPD5-206	ENST00000432606	SLC15A2	Q16348	729 aa		28.72	■■■□□ 2.19
RGPD5-206	ENST00000432606	TXNRD1	Q16881	649 aa		28.72	■■■□□ 2.19
RGPD5-206	ENST00000432606	FHDC1	Q9C0D6	1143 aa	Predicted RBP	28.71	■■■□□ 2.19
RGPD5-206	ENST00000432606	SPG7	Q9UQ90	795 aa		28.71	■■■□□ 2.19
RGPD5-206	ENST00000432606	PKD1L3	Q7Z443	1732 aa		28.71	■■■□□ 2.19
RGPD5-206	ENST00000432606	BTAF1	O14981	1849 aa		28.71	■■■□□ 2.19
RGPD5-206	ENST00000432606	MTHFS	P49914	203 aa		28.7	■■■□□ 2.18
RGPD5-206	ENST00000432606	CNGB1	Q14028	1251 aa	Predicted RBP	28.7	■■■□□ 2.18
RGPD5-206	ENST00000432606	MTFR1L	Q9H019	292 aa		28.7	■■■□□ 2.18
RGPD5-206	ENST00000432606	IGSF1	Q8N6C5	1336 aa		28.69	■■■□□ 2.18
RGPD5-206	ENST00000432606	SGIP1	Q9BQI5	828 aa		28.69	■■■□□ 2.18
RGPD5-206	ENST00000432606	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	28.69	■■■□□ 2.18
RGPD5-206	ENST00000432606	DOT1L	Q8TEK3	1739 aa		28.69	■■■□□ 2.18
RGPD5-206	ENST00000432606	PLEKHG2	Q9H7P9	1386 aa		28.68	■■■□□ 2.18
RGPD5-206	ENST00000432606	SYTL4	Q96C24	671 aa	Predicted RBP	28.67	■■■□□ 2.18
RGPD5-206	ENST00000432606	ZNF316	A6NFI3	1004 aa	Predicted RBP	28.65	■■■□□ 2.18
RGPD5-206	ENST00000432606	C1QTNF8	P60827	252 aa		28.65	■■■□□ 2.18
RGPD5-206	ENST00000432606	PRIM1	P49642	420 aa	Known RBP	28.64	■■■□□ 2.18
RGPD5-206	ENST00000432606	CHD4	Q14839	1912 aa		28.63	■■■□□ 2.17
RGPD5-206	ENST00000432606	SENP3-EIF4A1	A0A087X0R7	540 aa		28.63	■■■□□ 2.17
RGPD5-206	ENST00000432606	IL13	P35225	146 aa		28.63	■■■□□ 2.17
RGPD5-206	ENST00000432606	CYP27B1	O15528	508 aa		28.62	■■■□□ 2.17
RGPD5-206	ENST00000432606	IFNL2	Q8IZJ0	200 aa		28.6	■■■□□ 2.17
RGPD5-206	ENST00000432606	MAP3K5	Q99683	1374 aa		28.6	■■■□□ 2.17
RGPD5-206	ENST00000432606	DIAPH1	O60610	1272 aa	Known RBP	28.59	■■■□□ 2.17
RGPD5-206	ENST00000432606	PLEKHO1	Q53GL0	409 aa	Predicted RBP	28.59	■■■□□ 2.17
RGPD5-206	ENST00000432606	SULT6B1	Q6IMI4	303 aa		28.59	■■■□□ 2.17
RGPD5-206	ENST00000432606	ARX	Q96QS3	562 aa		28.59	■■■□□ 2.17
RGPD5-206	ENST00000432606	AMOT	Q4VCS5	1084 aa		28.58	■■■□□ 2.17
RGPD5-206	ENST00000432606	UTRN	P46939	3433 aa		28.57	■■■□□ 2.16
RGPD5-206	ENST00000432606	NKX1-1	Q15270	411 aa	Predicted RBP	28.57	■■■□□ 2.16
RGPD5-206	ENST00000432606	ITGB4	P16144	1822 aa		28.56	■■■□□ 2.16
RGPD5-206	ENST00000432606	KDR	P35968	1356 aa		28.55	■■■□□ 2.16
RGPD5-206	ENST00000432606	PHKG2	P15735	406 aa		28.55	■■■□□ 2.16
RGPD5-206	ENST00000432606	AEBP1	Q8IUX7	1158 aa		28.55	■■■□□ 2.16
RGPD5-206	ENST00000432606	CFAP53	Q96M91	514 aa		28.54	■■■□□ 2.16
RGPD5-206	ENST00000432606	SLC27A3	Q5K4L6	730 aa		28.53	■■■□□ 2.16
RGPD5-206	ENST00000432606	HSP90AB1	P08238	724 aa	Known RBP	28.52	■■■□□ 2.16
RGPD5-206	ENST00000432606	MPRIP	Q6WCQ1	1025 aa		28.52	■■■□□ 2.16
RGPD5-206	ENST00000432606	TOGARAM1	Q9Y4F4	1720 aa		28.52	■■■□□ 2.16
RGPD5-206	ENST00000432606	LY75	O60449	1722 aa		28.51	■■■□□ 2.15
RGPD5-206	ENST00000432606	PPP2R1A	P30153	589 aa		28.49	■■■□□ 2.15
RGPD5-206	ENST00000432606	ZNF530	Q6P9A1	599 aa	Predicted RBP	28.49	■■■□□ 2.15
RGPD5-206	ENST00000432606	HMGB2	P26583	209 aa	Known RBP	28.48	■■■□□ 2.15
RGPD5-206	ENST00000432606	C1orf141	Q5JVX7	400 aa		28.48	■■■□□ 2.15
RGPD5-206	ENST00000432606	PAPPA	Q13219	1627 aa		28.47	■■■□□ 2.15
RGPD5-206	ENST00000432606	COL3A1	P02461	1466 aa	Predicted RBP	28.47	■■■□□ 2.15
RGPD5-206	ENST00000432606	HMOX1	P09601	288 aa		28.47	■■■□□ 2.15
RGPD5-206	ENST00000432606	GPR162	Q16538	588 aa		28.47	■■■□□ 2.15
RGPD5-206	ENST00000432606	U2SURP	O15042	1029 aa	Known RBP	28.46	■■■□□ 2.15
RGPD5-206	ENST00000432606	IFFO2	Q5TF58	517 aa		28.46	■■■□□ 2.15
RGPD5-206	ENST00000432606	SLC16A10	Q8TF71	515 aa		28.46	■■■□□ 2.15
RGPD5-206	ENST00000432606	SMARCC1	Q92922	1105 aa	Predicted RBP	28.46	■■■□□ 2.15
RGPD5-206	ENST00000432606	DCAF5	Q96JK2	942 aa		28.46	■■■□□ 2.15
RGPD5-206	ENST00000432606	TMOD3	Q9NYL9	352 aa		28.46	■■■□□ 2.15
RGPD5-206	ENST00000432606	DDX10	Q13206	875 aa	Known RBP	28.45	■■■□□ 2.14
RGPD5-206	ENST00000432606	NUDC	Q9Y266	331 aa		28.45	■■■□□ 2.14
RGPD5-206	ENST00000432606	LRRC4B	Q9NT99	713 aa		28.44	■■■□□ 2.14
RGPD5-206	ENST00000432606	CCNL1	Q9UK58	526 aa	Predicted RBP	28.44	■■■□□ 2.14
RGPD5-206	ENST00000432606	ERVV-2	B6SEH9	535 aa		28.43	■■■□□ 2.14
RGPD5-206	ENST00000432606	ZNF827	Q17R98	1081 aa		28.43	■■■□□ 2.14
RGPD5-206	ENST00000432606	PIGB	Q92521	554 aa		28.43	■■■□□ 2.14
RGPD5-206	ENST00000432606	GIGYF1	O75420	1035 aa	Predicted RBP	28.42	■■■□□ 2.14
RGPD5-206	ENST00000432606	PALLD	Q8WX93	1383 aa		28.41	■■■□□ 2.14
RGPD5-206	ENST00000432606	AKAP4	Q5JQC9	854 aa		28.39	■■■□□ 2.14
RGPD5-206	ENST00000432606	AKT1S1	Q96B36	256 aa		28.39	■■■□□ 2.14

Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms