RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 FAM212AQ96EL1 285 aa13.33□□□□□ -0.28
CDC42-IT1-201ENST00000431803 TESK2Q96S53 571 aa13.33□□□□□ -0.28
CDC42-IT1-201ENST00000431803 CDCA7Q9BWT1 371 aaPredicted RBP13.33□□□□□ -0.28
CDC42-IT1-201ENST00000431803 SLC12A5Q9H2X9 1139 aa13.33□□□□□ -0.28
CDC42-IT1-201ENST00000431803 SBF2Q86WG5 1849 aa13.32□□□□□ -0.28
CDC42-IT1-201ENST00000431803 TRIM26Q12899 539 aaPredicted RBP13.32□□□□□ -0.28
CDC42-IT1-201ENST00000431803 HDGFL2Q7Z4V5 671 aaPredicted RBP13.32□□□□□ -0.28
CDC42-IT1-201ENST00000431803 NME9Q86XW9 330 aa13.32□□□□□ -0.28
CDC42-IT1-201ENST00000431803 NINLQ9Y2I6 1382 aa13.32□□□□□ -0.28
CDC42-IT1-201ENST00000431803 TMC1Q8TDI8 760 aa13.31□□□□□ -0.28
CDC42-IT1-201ENST00000431803 TERF2IPQ9NYB0 399 aa13.31□□□□□ -0.28
CDC42-IT1-201ENST00000431803 CCDC7Q96M83 1385 aa13.31□□□□□ -0.28
CDC42-IT1-201ENST00000431803 LTN1O94822 1766 aa13.3□□□□□ -0.28
CDC42-IT1-201ENST00000431803 CSB-PGBD3P0DP91 1061 aa13.3□□□□□ -0.28
CDC42-IT1-201ENST00000431803 MARCH10Q8NA82 808 aaPredicted RBP13.3□□□□□ -0.28
CDC42-IT1-201ENST00000431803 ERBB3P21860 1342 aa13.3□□□□□ -0.28
CDC42-IT1-201ENST00000431803 TNS2Q63HR2 1409 aa13.3□□□□□ -0.28
CDC42-IT1-201ENST00000431803 ST20-MTHFSA0A0A6YYL1 179 aa13.29□□□□□ -0.28
CDC42-IT1-201ENST00000431803 PLSCR1O15162 318 aa13.28□□□□□ -0.28
CDC42-IT1-201ENST00000431803 MS4A3Q96HJ5 214 aa13.28□□□□□ -0.28
CDC42-IT1-201ENST00000431803 BCL11BQ9C0K0 894 aaPredicted RBP13.28□□□□□ -0.28
CDC42-IT1-201ENST00000431803 SLC24A1O60721 1099 aa13.27□□□□□ -0.29
CDC42-IT1-201ENST00000431803 DCAF8Q5TAQ9 597 aa13.27□□□□□ -0.29
CDC42-IT1-201ENST00000431803 PTF1AQ7RTS3 328 aa13.27□□□□□ -0.29
CDC42-IT1-201ENST00000431803 KIF12Q96FN5 646 aa13.27□□□□□ -0.29
CDC42-IT1-201ENST00000431803 DCBLD2Q96PD2 775 aa13.27□□□□□ -0.29
CDC42-IT1-201ENST00000431803 NBPF14Q5TI25 921 aa13.26□□□□□ -0.29
CDC42-IT1-201ENST00000431803 ANKRD36BQ8N2N9 1353 aa13.25□□□□□ -0.29
CDC42-IT1-201ENST00000431803 USP47Q96K76 1375 aa13.25□□□□□ -0.29
CDC42-IT1-201ENST00000431803 EXOC5O00471 708 aa13.25□□□□□ -0.29
CDC42-IT1-201ENST00000431803 POTEIP0CG38 1075 aa13.25□□□□□ -0.29
CDC42-IT1-201ENST00000431803 ANKRD24Q8TF21 1146 aa13.24□□□□□ -0.29
CDC42-IT1-201ENST00000431803 NLRP2Q9NX02 1062 aa13.24□□□□□ -0.29
CDC42-IT1-201ENST00000431803 NHSQ6T4R5 1651 aa13.24□□□□□ -0.29
CDC42-IT1-201ENST00000431803 IP6K1Q92551 441 aa13.23□□□□□ -0.29
CDC42-IT1-201ENST00000431803 SPOCK2Q92563 424 aa13.23□□□□□ -0.29
CDC42-IT1-201ENST00000431803 FAM208AQ9UK61 1670 aaKnown RBP13.23□□□□□ -0.29
CDC42-IT1-201ENST00000431803 MAP3K13O43283 966 aa13.22□□□□□ -0.29
CDC42-IT1-201ENST00000431803 IL2RBP14784 551 aa13.22□□□□□ -0.29
CDC42-IT1-201ENST00000431803 ANO8Q9HCE9 1232 aaPredicted RBP13.22□□□□□ -0.29
CDC42-IT1-201ENST00000431803 TMF1P82094 1093 aa13.21□□□□□ -0.29
CDC42-IT1-201ENST00000431803 COG3Q96JB2 828 aa13.21□□□□□ -0.29
CDC42-IT1-201ENST00000431803 CASZ1Q86V15 1759 aa13.21□□□□□ -0.29
CDC42-IT1-201ENST00000431803 MAP3K19Q56UN5 1328 aa13.2□□□□□ -0.3
CDC42-IT1-201ENST00000431803 KCNQ2O43526 872 aa13.2□□□□□ -0.3
CDC42-IT1-201ENST00000431803 RTL1A6NKG5 1358 aa13.19□□□□□ -0.3
CDC42-IT1-201ENST00000431803 HOXC9P31274 260 aa13.18□□□□□ -0.3
CDC42-IT1-201ENST00000431803 GSE1Q14687 1217 aa13.18□□□□□ -0.3
CDC42-IT1-201ENST00000431803 TXNRD1Q16881 649 aa13.18□□□□□ -0.3
CDC42-IT1-201ENST00000431803 SPON1Q9HCB6 807 aa13.18□□□□□ -0.3
CDC42-IT1-201ENST00000431803 TIMELESSQ9UNS1 1208 aa13.18□□□□□ -0.3
CDC42-IT1-201ENST00000431803 MYOM1P52179 1685 aa13.18□□□□□ -0.3
CDC42-IT1-201ENST00000431803 CLSPNQ9HAW4 1339 aa13.17□□□□□ -0.3
CDC42-IT1-201ENST00000431803 FYB1O15117 783 aa13.17□□□□□ -0.3
CDC42-IT1-201ENST00000431803 FBLN1P23142 703 aa13.17□□□□□ -0.3
CDC42-IT1-201ENST00000431803 BTAF1O14981 1849 aa13.17□□□□□ -0.3
CDC42-IT1-201ENST00000431803 PAPPAQ13219 1627 aa13.17□□□□□ -0.3
CDC42-IT1-201ENST00000431803 PYGBP11216 843 aa13.16□□□□□ -0.3
CDC42-IT1-201ENST00000431803 CDCA8Q53HL2 280 aa13.16□□□□□ -0.3
CDC42-IT1-201ENST00000431803 ACSBG1Q96GR2 724 aa13.16□□□□□ -0.3
CDC42-IT1-201ENST00000431803 AMPHP49418 695 aa13.15□□□□□ -0.3
CDC42-IT1-201ENST00000431803 LTV1Q96GA3 475 aaPredicted RBP13.15□□□□□ -0.3
CDC42-IT1-201ENST00000431803 PDGFDQ9GZP0 370 aaPredicted RBP13.15□□□□□ -0.3
CDC42-IT1-201ENST00000431803 PCDHB13Q9Y5F0 798 aa13.15□□□□□ -0.3
CDC42-IT1-201ENST00000431803 SHANK3Q9BYB0 1731 aa13.15□□□□□ -0.3
CDC42-IT1-201ENST00000431803 KIF20BQ96Q89 1820 aa13.15□□□□□ -0.3
CDC42-IT1-201ENST00000431803 RGPD2P0DJD1 1756 aa13.15□□□□□ -0.31
CDC42-IT1-201ENST00000431803 MEGF6O75095 1541 aa13.14□□□□□ -0.31
CDC42-IT1-201ENST00000431803 RRS1Q15050 365 aaKnown RBP13.14□□□□□ -0.31
CDC42-IT1-201ENST00000431803 SLC15A2Q16348 729 aa13.14□□□□□ -0.31
CDC42-IT1-201ENST00000431803 GGNBP2Q9H3C7 697 aa13.14□□□□□ -0.31
CDC42-IT1-201ENST00000431803 STK32BQ9NY57 414 aa13.13□□□□□ -0.31
CDC42-IT1-201ENST00000431803 KIF24Q5T7B8 1368 aa13.12□□□□□ -0.31
CDC42-IT1-201ENST00000431803 SGIP1Q9BQI5 828 aa13.12□□□□□ -0.31
CDC42-IT1-201ENST00000431803 CARD14Q9BXL6 1004 aa13.12□□□□□ -0.31
CDC42-IT1-201ENST00000431803 PPP1R1BQ9UD71 204 aaPredicted RBP13.12□□□□□ -0.31
CDC42-IT1-201ENST00000431803 CIZ1Q9ULV3 898 aaPredicted RBP13.12□□□□□ -0.31
CDC42-IT1-201ENST00000431803 TRPC6Q9Y210 931 aa13.12□□□□□ -0.31
CDC42-IT1-201ENST00000431803 DOT1LQ8TEK3 1739 aa13.11□□□□□ -0.31
CDC42-IT1-201ENST00000431803 INSRP06213 1382 aa13.11□□□□□ -0.31
CDC42-IT1-201ENST00000431803 FLT4P35916 1363 aa13.11□□□□□ -0.31
CDC42-IT1-201ENST00000431803 ZBTB7AO95365 584 aa13.11□□□□□ -0.31
CDC42-IT1-201ENST00000431803 PTGER2P43116 358 aa13.11□□□□□ -0.31
CDC42-IT1-201ENST00000431803 NBPF6Q5VWK0 638 aa13.11□□□□□ -0.31
CDC42-IT1-201ENST00000431803 DDX54Q8TDD1 881 aaKnown RBP13.11□□□□□ -0.31
CDC42-IT1-201ENST00000431803 NBPF4Q96M43 638 aa13.11□□□□□ -0.31
CDC42-IT1-201ENST00000431803 SMG6Q86US8 1419 aaKnown RBP13.11□□□□□ -0.31
CDC42-IT1-201ENST00000431803 NSD3Q9BZ95 1437 aa13.11□□□□□ -0.31
CDC42-IT1-201ENST00000431803 UTRNP46939 3433 aa13.1□□□□□ -0.31
CDC42-IT1-201ENST00000431803 NSD2O96028 1365 aa13.1□□□□□ -0.31
CDC42-IT1-201ENST00000431803 ZCRB1Q8TBF4 217 aaKnown RBP13.1□□□□□ -0.31
CDC42-IT1-201ENST00000431803 LRRC4BQ9NT99 713 aa13.1□□□□□ -0.31
CDC42-IT1-201ENST00000431803 ANKRD26Q9UPS8 1709 aa13.1□□□□□ -0.31
CDC42-IT1-201ENST00000431803 CGNL1Q0VF96 1302 aa13.1□□□□□ -0.31
CDC42-IT1-201ENST00000431803 HSP90AB2PQ58FF8 381 aa13.09□□□□□ -0.31
CDC42-IT1-201ENST00000431803 IFNL1Q8IU54 200 aa13.09□□□□□ -0.31
CDC42-IT1-201ENST00000431803 ATMINO43313 823 aaPredicted RBP13.08□□□□□ -0.32
CDC42-IT1-201ENST00000431803 ZNF827Q17R98 1081 aa13.08□□□□□ -0.32
CDC42-IT1-201ENST00000431803 SLC27A3Q5K4L6 730 aa13.08□□□□□ -0.32
CDC42-IT1-201ENST00000431803 ASTLQ6HA08 431 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms