RNA–Protein interactions for RNA: ENST00000431678.5

PBRM1-213, Transcript of polybromo 1, human

TSL 5

Gene PBRM1, Length 809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PBRM1-213	ENST00000431678	NSD2	O96028	1365 aa		33.01	■■■□□ 2.88
PBRM1-213	ENST00000431678	PRIM1	P49642	420 aa	Known RBP	33.01	■■■□□ 2.87
PBRM1-213	ENST00000431678	TMF1	P82094	1093 aa		33.01	■■■□□ 2.87
PBRM1-213	ENST00000431678	NBPF6	Q5VWK0	638 aa		33.01	■■■□□ 2.87
PBRM1-213	ENST00000431678	USHBP1	Q8N6Y0	703 aa		33.01	■■■□□ 2.87
PBRM1-213	ENST00000431678	NBPF4	Q96M43	638 aa		33.01	■■■□□ 2.87
PBRM1-213	ENST00000431678	SLC24A1	O60721	1099 aa		33	■■■□□ 2.87
PBRM1-213	ENST00000431678	TRIM26	Q12899	539 aa	Predicted RBP	33	■■■□□ 2.87
PBRM1-213	ENST00000431678	AKT1S1	Q96B36	256 aa		33	■■■□□ 2.87
PBRM1-213	ENST00000431678	SYTL4	Q96C24	671 aa	Predicted RBP	33	■■■□□ 2.87
PBRM1-213	ENST00000431678	ZCRB1	Q8TBF4	217 aa	Known RBP	32.98	■■■□□ 2.87
PBRM1-213	ENST00000431678	RTL1	A6NKG5	1358 aa		32.97	■■■□□ 2.87
PBRM1-213	ENST00000431678	COL24A1	Q17RW2	1714 aa		32.94	■■■□□ 2.86
PBRM1-213	ENST00000431678	ARX	Q96QS3	562 aa		32.94	■■■□□ 2.86
PBRM1-213	ENST00000431678	HSP90AB2P	Q58FF8	381 aa		32.93	■■■□□ 2.86
PBRM1-213	ENST00000431678	SLC27A3	Q5K4L6	730 aa		32.93	■■■□□ 2.86
PBRM1-213	ENST00000431678	PNPLA7	Q6ZV29	1317 aa		32.92	■■■□□ 2.86
PBRM1-213	ENST00000431678	CARD14	Q9BXL6	1004 aa		32.91	■■■□□ 2.86
PBRM1-213	ENST00000431678	CHD4	Q14839	1912 aa		32.89	■■■□□ 2.86
PBRM1-213	ENST00000431678	INSR	P06213	1382 aa		32.86	■■■□□ 2.85
PBRM1-213	ENST00000431678	SMG6	Q86US8	1419 aa	Known RBP	32.85	■■■□□ 2.85
PBRM1-213	ENST00000431678	RAPGEF4	Q8WZA2	1011 aa		32.84	■■■□□ 2.85
PBRM1-213	ENST00000431678	TFCP2L1	Q9NZI6	479 aa		32.84	■■■□□ 2.85
PBRM1-213	ENST00000431678	TOGARAM1	Q9Y4F4	1720 aa		32.84	■■■□□ 2.85
PBRM1-213	ENST00000431678	NSD3	Q9BZ95	1437 aa		32.84	■■■□□ 2.85
PBRM1-213	ENST00000431678	FLT4	P35916	1363 aa		32.83	■■■□□ 2.85
PBRM1-213	ENST00000431678	CCNL1	Q9UK58	526 aa	Predicted RBP	32.83	■■■□□ 2.85
PBRM1-213	ENST00000431678	EMILIN1	Q9Y6C2	1016 aa		32.83	■■■□□ 2.85
PBRM1-213	ENST00000431678	ITGB4	P16144	1822 aa		32.83	■■■□□ 2.85
PBRM1-213	ENST00000431678	MAP3K5	Q99683	1374 aa		32.83	■■■□□ 2.85
PBRM1-213	ENST00000431678	MAP2	P11137	1827 aa	Known RBP	32.82	■■■□□ 2.84
PBRM1-213	ENST00000431678	CGNL1	Q0VF96	1302 aa		32.81	■■■□□ 2.84
PBRM1-213	ENST00000431678	TAT	P17735	454 aa	Predicted RBP	32.81	■■■□□ 2.84
PBRM1-213	ENST00000431678	CDCA8	Q53HL2	280 aa		32.81	■■■□□ 2.84
PBRM1-213	ENST00000431678	SLC16A10	Q8TF71	515 aa		32.81	■■■□□ 2.84
PBRM1-213	ENST00000431678	TAF1L	Q8IZX4	1826 aa		32.81	■■■□□ 2.84
PBRM1-213	ENST00000431678	C5	P01031	1676 aa		32.8	■■■□□ 2.84
PBRM1-213	ENST00000431678	ANKRD26	Q9UPS8	1709 aa		32.8	■■■□□ 2.84
PBRM1-213	ENST00000431678	KLHL34	Q8N239	644 aa		32.79	■■■□□ 2.84
PBRM1-213	ENST00000431678	PKD1L3	Q7Z443	1732 aa		32.78	■■■□□ 2.84
PBRM1-213	ENST00000431678	KIF24	Q5T7B8	1368 aa		32.77	■■■□□ 2.84
PBRM1-213	ENST00000431678	CYP27B1	O15528	508 aa		32.76	■■■□□ 2.83
PBRM1-213	ENST00000431678	ZNF784	Q8NCA9	323 aa	Predicted RBP	32.76	■■■□□ 2.83
PBRM1-213	ENST00000431678	GOLGB1	Q14789	3259 aa	Known RBP	32.76	■■■□□ 2.83
PBRM1-213	ENST00000431678	COL23A1	Q86Y22	540 aa	Predicted RBP	32.75	■■■□□ 2.83
PBRM1-213	ENST00000431678	PCDH11X	Q9BZA7	1347 aa		32.75	■■■□□ 2.83
PBRM1-213	ENST00000431678	PCDH11Y	Q9BZA8	1340 aa		32.75	■■■□□ 2.83
PBRM1-213	ENST00000431678	POLD1	P28340	1107 aa		32.74	■■■□□ 2.83
PBRM1-213	ENST00000431678	PPM1G	O15355	546 aa	Predicted RBP	32.72	■■■□□ 2.83
PBRM1-213	ENST00000431678	MPRIP	Q6WCQ1	1025 aa		32.72	■■■□□ 2.83
PBRM1-213	ENST00000431678	NLGN2	Q8NFZ4	835 aa		32.72	■■■□□ 2.83
PBRM1-213	ENST00000431678	NCAPD2	Q15021	1401 aa		32.7	■■■□□ 2.83
PBRM1-213	ENST00000431678	MSH5	O43196	834 aa		32.69	■■■□□ 2.82
PBRM1-213	ENST00000431678	PALLD	Q8WX93	1383 aa		32.69	■■■□□ 2.82
PBRM1-213	ENST00000431678	GPR162	Q16538	588 aa		32.68	■■■□□ 2.82
PBRM1-213	ENST00000431678	MSL1	Q68DK7	614 aa		32.67	■■■□□ 2.82
PBRM1-213	ENST00000431678	PCGF6	Q9BYE7	350 aa		32.66	■■■□□ 2.82
PBRM1-213	ENST00000431678	POLR3GL	Q9BT43	218 aa		32.65	■■■□□ 2.82
PBRM1-213	ENST00000431678	C4B	P0C0L5	1744 aa		32.65	■■■□□ 2.82
PBRM1-213	ENST00000431678	WASHC2A	Q641Q2	1341 aa		32.64	■■■□□ 2.82
PBRM1-213	ENST00000431678	PELP1	Q8IZL8	1130 aa	Known RBP	32.64	■■■□□ 2.82
PBRM1-213	ENST00000431678	EYA1	Q99502	592 aa		32.64	■■■□□ 2.82
PBRM1-213	ENST00000431678	TIMELESS	Q9UNS1	1208 aa		32.64	■■■□□ 2.82
PBRM1-213	ENST00000431678	AMIGO3	Q86WK7	504 aa		32.63	■■■□□ 2.81
PBRM1-213	ENST00000431678	POLK	Q9UBT6	870 aa		32.63	■■■□□ 2.81
PBRM1-213	ENST00000431678	UBR3	Q6ZT12	1888 aa		32.63	■■■□□ 2.81
PBRM1-213	ENST00000431678	PIGB	Q92521	554 aa		32.62	■■■□□ 2.81
PBRM1-213	ENST00000431678	SMIM5	Q71RC9	77 aa		32.61	■■■□□ 2.81
PBRM1-213	ENST00000431678	NKX1-1	Q15270	411 aa	Predicted RBP	32.59	■■■□□ 2.81
PBRM1-213	ENST00000431678	TNNT2	P45379	298 aa	Predicted RBP	32.58	■■■□□ 2.81
PBRM1-213	ENST00000431678	YBX3	P16989	372 aa	Known RBP eCLIP	32.56	■■■□□ 2.8
PBRM1-213	ENST00000431678	SPG7	Q9UQ90	795 aa		32.56	■■■□□ 2.8
PBRM1-213	ENST00000431678	SMARCC1	Q92922	1105 aa	Predicted RBP	32.54	■■■□□ 2.8
PBRM1-213	ENST00000431678	CLSPN	Q9HAW4	1339 aa		32.53	■■■□□ 2.8
PBRM1-213	ENST00000431678	EIF4A2	Q14240	407 aa	Known RBP	32.53	■■■□□ 2.8
PBRM1-213	ENST00000431678	PHF14	O94880	888 aa		32.5	■■■□□ 2.79
PBRM1-213	ENST00000431678	PHKG2	P15735	406 aa		32.5	■■■□□ 2.79
PBRM1-213	ENST00000431678	LINC00116	Q8NCU8	138 aa		32.5	■■■□□ 2.79
PBRM1-213	ENST00000431678	AK7	Q96M32	723 aa		32.5	■■■□□ 2.79
PBRM1-213	ENST00000431678	ASAP1	Q9ULH1	1129 aa		32.5	■■■□□ 2.79
PBRM1-213	ENST00000431678	HSPA5	P11021	654 aa	Known RBP	32.49	■■■□□ 2.79
PBRM1-213	ENST00000431678	FLAD1	Q8NFF5	587 aa		32.49	■■■□□ 2.79
PBRM1-213	ENST00000431678	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	32.49	■■■□□ 2.79	4e-7	■■■■□ 19.4
PBRM1-213	ENST00000431678	LOC102724428	A0A0B4J2F2	783 aa		32.48	■■■□□ 2.79
PBRM1-213	ENST00000431678	SIK1	P57059	783 aa		32.48	■■■□□ 2.79
PBRM1-213	ENST00000431678	ITPK1	Q13572	414 aa		32.47	■■■□□ 2.79
PBRM1-213	ENST00000431678	IFNL2	Q8IZJ0	200 aa		32.47	■■■□□ 2.79
PBRM1-213	ENST00000431678	PANK3	Q9H999	370 aa		32.47	■■■□□ 2.79
PBRM1-213	ENST00000431678	TMOD3	Q9NYL9	352 aa		32.47	■■■□□ 2.79
PBRM1-213	ENST00000431678	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	32.45	■■■□□ 2.79
PBRM1-213	ENST00000431678	EIF4G2	P78344	907 aa	Known RBP eCLIP	32.44	■■■□□ 2.78
PBRM1-213	ENST00000431678	ATG3	Q9NT62	314 aa		32.43	■■■□□ 2.78
PBRM1-213	ENST00000431678	C1QTNF8	P60827	252 aa		32.42	■■■□□ 2.78
PBRM1-213	ENST00000431678	CD2AP	Q9Y5K6	639 aa		32.42	■■■□□ 2.78
PBRM1-213	ENST00000431678	IGSF1	Q8N6C5	1336 aa		32.42	■■■□□ 2.78
PBRM1-213	ENST00000431678	ATP6V1A	P38606	617 aa		32.4	■■■□□ 2.78
PBRM1-213	ENST00000431678	HMGB2	P26583	209 aa	Known RBP	32.39	■■■□□ 2.78
PBRM1-213	ENST00000431678	GRIN3B	O60391	1043 aa		32.38	■■■□□ 2.77
PBRM1-213	ENST00000431678	SSFA2	P28290	1259 aa		32.38	■■■□□ 2.77
PBRM1-213	ENST00000431678	GNPAT	O15228	680 aa		32.37	■■■□□ 2.77

Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms