RNA–Protein interactions for RNA: ENST00000431496.1

AC055876.3-201, humanhuman

BASIC

Gene AC055876.3, Length 288 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.3-201ENST00000431496 KIF24Q5T7B8 1368 aa22.45■■□□□ 1.18
AC055876.3-201ENST00000431496 MEGF6O75095 1541 aa22.45■■□□□ 1.18
AC055876.3-201ENST00000431496 SLC27A3Q5K4L6 730 aa22.44■■□□□ 1.18
AC055876.3-201ENST00000431496 SMG6Q86US8 1419 aaKnown RBP22.44■■□□□ 1.18
AC055876.3-201ENST00000431496 RAPGEF4Q8WZA2 1011 aa22.44■■□□□ 1.18
AC055876.3-201ENST00000431496 NSD3Q9BZ95 1437 aa22.44■■□□□ 1.18
AC055876.3-201ENST00000431496 MTFR1LQ9H019 292 aa22.44■■□□□ 1.18
AC055876.3-201ENST00000431496 FLT4P35916 1363 aa22.43■■□□□ 1.18
AC055876.3-201ENST00000431496 ZNF827Q17R98 1081 aa22.42■■□□□ 1.18
AC055876.3-201ENST00000431496 KIF20BQ96Q89 1820 aa22.41■■□□□ 1.18
AC055876.3-201ENST00000431496 TATP17735 454 aaPredicted RBP22.41■■□□□ 1.18
AC055876.3-201ENST00000431496 AKT1S1Q96B36 256 aa22.41■■□□□ 1.18
AC055876.3-201ENST00000431496 EMILIN1Q9Y6C2 1016 aa22.41■■□□□ 1.18
AC055876.3-201ENST00000431496 MYOM1P52179 1685 aa22.4■■□□□ 1.18
AC055876.3-201ENST00000431496 DCAF8L1A6NGE4 600 aa22.4■■□□□ 1.18
AC055876.3-201ENST00000431496 SGIP1Q9BQI5 828 aa22.4■■□□□ 1.18
AC055876.3-201ENST00000431496 PAPPAQ13219 1627 aa22.39■■□□□ 1.18
AC055876.3-201ENST00000431496 NSD2O96028 1365 aa22.38■■□□□ 1.17
AC055876.3-201ENST00000431496 PPM1GO15355 546 aaPredicted RBP22.37■■□□□ 1.17
AC055876.3-201ENST00000431496 KCNQ4P56696 695 aa22.37■■□□□ 1.17
AC055876.3-201ENST00000431496 EIF4G2P78344 907 aaKnown RBP eCLIP22.37■■□□□ 1.17
AC055876.3-201ENST00000431496 POLR3GLQ9BT43 218 aa22.37■■□□□ 1.17
AC055876.3-201ENST00000431496 SHANK3Q9BYB0 1731 aa22.37■■□□□ 1.17
AC055876.3-201ENST00000431496 CCER1Q8TC90 406 aaPredicted RBP22.36■■□□□ 1.17
AC055876.3-201ENST00000431496 WASHC2AQ641Q2 1341 aa22.35■■□□□ 1.17
AC055876.3-201ENST00000431496 PCDH11XQ9BZA7 1347 aa22.34■■□□□ 1.17
AC055876.3-201ENST00000431496 PCDH11YQ9BZA8 1340 aa22.34■■□□□ 1.17
AC055876.3-201ENST00000431496 HSPA5P11021 654 aaKnown RBP22.34■■□□□ 1.17
AC055876.3-201ENST00000431496 SYT17Q9BSW7 474 aa22.34■■□□□ 1.17
AC055876.3-201ENST00000431496 FHDC1Q9C0D6 1143 aaPredicted RBP22.34■■□□□ 1.17
AC055876.3-201ENST00000431496 CYP27B1O15528 508 aa22.33■■□□□ 1.17
AC055876.3-201ENST00000431496 SLC16A10Q8TF71 515 aa22.33■■□□□ 1.17
AC055876.3-201ENST00000431496 ARXQ96QS3 562 aa22.33■■□□□ 1.17
AC055876.3-201ENST00000431496 TFCP2L1Q9NZI6 479 aa22.33■■□□□ 1.17
AC055876.3-201ENST00000431496 POLKQ9UBT6 870 aa22.33■■□□□ 1.17
AC055876.3-201ENST00000431496 CCNL1Q9UK58 526 aaPredicted RBP22.33■■□□□ 1.17
AC055876.3-201ENST00000431496 DOT1LQ8TEK3 1739 aa22.33■■□□□ 1.17
AC055876.3-201ENST00000431496 YY1P25490 414 aa22.32■■□□□ 1.16
AC055876.3-201ENST00000431496 PNPLA7Q6ZV29 1317 aa22.31■■□□□ 1.16
AC055876.3-201ENST00000431496 EYA1Q99502 592 aa22.3■■□□□ 1.16
AC055876.3-201ENST00000431496 PANK3Q9H999 370 aa22.29■■□□□ 1.16
AC055876.3-201ENST00000431496 NCAPD2Q15021 1401 aa22.29■■□□□ 1.16
AC055876.3-201ENST00000431496 MAP2P11137 1827 aaKnown RBP22.29■■□□□ 1.16
AC055876.3-201ENST00000431496 LY75O60449 1722 aa22.28■■□□□ 1.16
AC055876.3-201ENST00000431496 TNNT2P45379 298 aaPredicted RBP22.28■■□□□ 1.16
AC055876.3-201ENST00000431496 MPRIPQ6WCQ1 1025 aa22.28■■□□□ 1.16
AC055876.3-201ENST00000431496 NKX1-1Q15270 411 aaPredicted RBP22.27■■□□□ 1.16
AC055876.3-201ENST00000431496 SPG7Q9UQ90 795 aa22.27■■□□□ 1.16
AC055876.3-201ENST00000431496 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.26■■□□□ 1.15
AC055876.3-201ENST00000431496 POLD1P28340 1107 aa22.25■■□□□ 1.15
AC055876.3-201ENST00000431496 ANKRD26Q9UPS8 1709 aa22.25■■□□□ 1.15
AC055876.3-201ENST00000431496 MAP3K5Q99683 1374 aa22.25■■□□□ 1.15
AC055876.3-201ENST00000431496 QSER1Q2KHR3 1735 aa22.24■■□□□ 1.15
AC055876.3-201ENST00000431496 HMGB2P26583 209 aaKnown RBP22.24■■□□□ 1.15
AC055876.3-201ENST00000431496 EIF4A2Q14240 407 aaKnown RBP22.24■■□□□ 1.15
AC055876.3-201ENST00000431496 PIGBQ92521 554 aa22.23■■□□□ 1.15
AC055876.3-201ENST00000431496 SMARCC1Q92922 1105 aaPredicted RBP22.23■■□□□ 1.15
AC055876.3-201ENST00000431496 PALLDQ8WX93 1383 aa22.23■■□□□ 1.15
AC055876.3-201ENST00000431496 COL23A1Q86Y22 540 aaPredicted RBP22.22■■□□□ 1.15
AC055876.3-201ENST00000431496 PKD1L3Q7Z443 1732 aa22.2■■□□□ 1.14
AC055876.3-201ENST00000431496 UTRNP46939 3433 aa22.2■■□□□ 1.14
AC055876.3-201ENST00000431496 MSH5O43196 834 aa22.2■■□□□ 1.14
AC055876.3-201ENST00000431496 TUBGCP6Q96RT7 1819 aa22.2■■□□□ 1.14
AC055876.3-201ENST00000431496 IFNL2Q8IZJ0 200 aa22.19■■□□□ 1.14
AC055876.3-201ENST00000431496 PHKG2P15735 406 aa22.18■■□□□ 1.14
AC055876.3-201ENST00000431496 COL24A1Q17RW2 1714 aa22.17■■□□□ 1.14
AC055876.3-201ENST00000431496 MORC1Q86VD1 984 aa22.17■■□□□ 1.14
AC055876.3-201ENST00000431496 FLAD1Q8NFF5 587 aa22.17■■□□□ 1.14
AC055876.3-201ENST00000431496 ITGB4P16144 1822 aa22.17■■□□□ 1.14
AC055876.3-201ENST00000431496 KLHL34Q8N239 644 aa22.16■■□□□ 1.14
AC055876.3-201ENST00000431496 TMOD3Q9NYL9 352 aa22.16■■□□□ 1.14
AC055876.3-201ENST00000431496 TOGARAM1Q9Y4F4 1720 aa22.16■■□□□ 1.14
AC055876.3-201ENST00000431496 IGSF1Q8N6C5 1336 aa22.15■■□□□ 1.14
AC055876.3-201ENST00000431496 KNSTRNQ9Y448 316 aa22.15■■□□□ 1.14
AC055876.3-201ENST00000431496 PLEKHG2Q9H7P9 1386 aa22.13■■□□□ 1.13
AC055876.3-201ENST00000431496 LOC102724428A0A0B4J2F2 783 aa22.13■■□□□ 1.13
AC055876.3-201ENST00000431496 SIK1P57059 783 aa22.13■■□□□ 1.13
AC055876.3-201ENST00000431496 GPR162Q16538 588 aa22.13■■□□□ 1.13
AC055876.3-201ENST00000431496 ASAP1Q9ULH1 1129 aa22.13■■□□□ 1.13
AC055876.3-201ENST00000431496 C5P01031 1676 aa22.13■■□□□ 1.13
AC055876.3-201ENST00000431496 MSL1Q68DK7 614 aa22.12■■□□□ 1.13
AC055876.3-201ENST00000431496 AK7Q96M32 723 aa22.12■■□□□ 1.13
AC055876.3-201ENST00000431496 TAF1LQ8IZX4 1826 aa22.11■■□□□ 1.13
AC055876.3-201ENST00000431496 PLEKHO1Q53GL0 409 aaPredicted RBP22.11■■□□□ 1.13
AC055876.3-201ENST00000431496 AMIGO3Q86WK7 504 aa22.1■■□□□ 1.13
AC055876.3-201ENST00000431496 NLGN2Q8NFZ4 835 aa22.1■■□□□ 1.13
AC055876.3-201ENST00000431496 ATG3Q9NT62 314 aa22.1■■□□□ 1.13
AC055876.3-201ENST00000431496 ERVV-2B6SEH9 535 aa22.09■■□□□ 1.13
AC055876.3-201ENST00000431496 AMER1Q5JTC6 1135 aaPredicted RBP22.09■■□□□ 1.13
AC055876.3-201ENST00000431496 LINC00116Q8NCU8 138 aa22.09■■□□□ 1.13
AC055876.3-201ENST00000431496 KIF7Q2M1P5 1343 aa22.08■■□□□ 1.13
AC055876.3-201ENST00000431496 HSP90AB1P08238 724 aaKnown RBP22.08■■□□□ 1.13
AC055876.3-201ENST00000431496 AMOTQ4VCS5 1084 aa22.08■■□□□ 1.13
AC055876.3-201ENST00000431496 ZNF784Q8NCA9 323 aaPredicted RBP22.08■■□□□ 1.13
AC055876.3-201ENST00000431496 DCAF5Q96JK2 942 aa22.08■■□□□ 1.13
AC055876.3-201ENST00000431496 C4BP0C0L5 1744 aa22.07■■□□□ 1.12
AC055876.3-201ENST00000431496 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.07■■□□□ 1.12
AC055876.3-201ENST00000431496 ATP6V1AP38606 617 aa22.07■■□□□ 1.12
AC055876.3-201ENST00000431496 ITPK1Q13572 414 aa22.07■■□□□ 1.12
AC055876.3-201ENST00000431496 SMIM5Q71RC9 77 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms