RNA–Protein interactions for RNA: ENST00000431460.1

TRERNA1-201, translation regulatory long non-coding RNA 1, humanhuman

TSL 2 BASIC

Gene TRERNA1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERNA1-201ENST00000431460 CNGB1Q14028 1251 aaPredicted RBP16.24■□□□□ 0.19
TRERNA1-201ENST00000431460 MORC1Q86VD1 984 aa16.24■□□□□ 0.19
TRERNA1-201ENST00000431460 ZCRB1Q8TBF4 217 aaKnown RBP16.24■□□□□ 0.19
TRERNA1-201ENST00000431460 NSD2O96028 1365 aa16.24■□□□□ 0.19
TRERNA1-201ENST00000431460 MAP2P11137 1827 aaKnown RBP16.24■□□□□ 0.19
TRERNA1-201ENST00000431460 TATP17735 454 aaPredicted RBP16.23■□□□□ 0.19
TRERNA1-201ENST00000431460 SYTL4Q96C24 671 aaPredicted RBP16.23■□□□□ 0.19
TRERNA1-201ENST00000431460 SHANK3Q9BYB0 1731 aa16.22■□□□□ 0.19
TRERNA1-201ENST00000431460 ZNF316A6NFI3 1004 aaPredicted RBP16.22■□□□□ 0.19
TRERNA1-201ENST00000431460 NBPF14Q5TI25 921 aa16.22■□□□□ 0.19
TRERNA1-201ENST00000431460 RGPD3A6NKT7 1758 aaPredicted RBP16.21■□□□□ 0.19
TRERNA1-201ENST00000431460 RGPD4Q7Z3J3 1758 aa16.21■□□□□ 0.19
TRERNA1-201ENST00000431460 PLSCR1O15162 318 aa16.21■□□□□ 0.19
TRERNA1-201ENST00000431460 DOT1LQ8TEK3 1739 aa16.21■□□□□ 0.19
TRERNA1-201ENST00000431460 AMER1Q5JTC6 1135 aaPredicted RBP16.2■□□□□ 0.18
TRERNA1-201ENST00000431460 BTAF1O14981 1849 aa16.19■□□□□ 0.18
TRERNA1-201ENST00000431460 NPC1L1Q9UHC9 1359 aa16.19■□□□□ 0.18
TRERNA1-201ENST00000431460 EIF4A2Q14240 407 aaKnown RBP16.19■□□□□ 0.18
TRERNA1-201ENST00000431460 TXNRD1Q16881 649 aa16.19■□□□□ 0.18
TRERNA1-201ENST00000431460 CC2D1BQ5T0F9 858 aaKnown RBP16.19■□□□□ 0.18
TRERNA1-201ENST00000431460 EYA1Q99502 592 aa16.19■□□□□ 0.18
TRERNA1-201ENST00000431460 ANO8Q9HCE9 1232 aaPredicted RBP16.19■□□□□ 0.18
TRERNA1-201ENST00000431460 PRIM1P49642 420 aaKnown RBP16.18■□□□□ 0.18
TRERNA1-201ENST00000431460 PROM2Q8N271 834 aa16.18■□□□□ 0.18
TRERNA1-201ENST00000431460 PCDH11XQ9BZA7 1347 aa16.18■□□□□ 0.18
TRERNA1-201ENST00000431460 PCDH11YQ9BZA8 1340 aa16.18■□□□□ 0.18
TRERNA1-201ENST00000431460 DDX10Q13206 875 aaKnown RBP16.17■□□□□ 0.18
TRERNA1-201ENST00000431460 KAT6BQ8WYB5 2073 aa16.16■□□□□ 0.18
TRERNA1-201ENST00000431460 LRP5O75197 1615 aa16.16■□□□□ 0.18
TRERNA1-201ENST00000431460 NCAPD2Q15021 1401 aa16.15■□□□□ 0.18
TRERNA1-201ENST00000431460 PKD1L3Q7Z443 1732 aa16.14■□□□□ 0.17
TRERNA1-201ENST00000431460 CYP27B1O15528 508 aa16.13■□□□□ 0.17
TRERNA1-201ENST00000431460 STK32BQ9NY57 414 aa16.13■□□□□ 0.17
TRERNA1-201ENST00000431460 KCNQ4P56696 695 aa16.12■□□□□ 0.17
TRERNA1-201ENST00000431460 SPG7Q9UQ90 795 aa16.12■□□□□ 0.17
TRERNA1-201ENST00000431460 PDGFDQ9GZP0 370 aaPredicted RBP16.11■□□□□ 0.17
TRERNA1-201ENST00000431460 IGSF1Q8N6C5 1336 aa16.11■□□□□ 0.17
TRERNA1-201ENST00000431460 TOGARAM1Q9Y4F4 1720 aa16.11■□□□□ 0.17
TRERNA1-201ENST00000431460 MTHFSP49914 203 aa16.1■□□□□ 0.17
TRERNA1-201ENST00000431460 MPRIPQ6WCQ1 1025 aa16.1■□□□□ 0.17
TRERNA1-201ENST00000431460 AEBP1Q8IUX7 1158 aa16.1■□□□□ 0.17
TRERNA1-201ENST00000431460 LRRC4BQ9NT99 713 aa16.1■□□□□ 0.17
TRERNA1-201ENST00000431460 SLC15A2Q16348 729 aa16.09■□□□□ 0.17
TRERNA1-201ENST00000431460 PAPPAQ13219 1627 aa16.08■□□□□ 0.17
TRERNA1-201ENST00000431460 ZBTB7AO95365 584 aa16.08■□□□□ 0.16
TRERNA1-201ENST00000431460 ZNF827Q17R98 1081 aa16.08■□□□□ 0.16
TRERNA1-201ENST00000431460 PHKG2P15735 406 aa16.07■□□□□ 0.16
TRERNA1-201ENST00000431460 SULT6B1Q6IMI4 303 aa16.07■□□□□ 0.16
TRERNA1-201ENST00000431460 CASZ1Q86V15 1759 aa16.07■□□□□ 0.16
TRERNA1-201ENST00000431460 IL13P35225 146 aa16.06■□□□□ 0.16
TRERNA1-201ENST00000431460 SLC27A3Q5K4L6 730 aa16.06■□□□□ 0.16
TRERNA1-201ENST00000431460 IFNL2Q8IZJ0 200 aa16.06■□□□□ 0.16
TRERNA1-201ENST00000431460 SPON1Q9HCB6 807 aa16.06■□□□□ 0.16
TRERNA1-201ENST00000431460 CCNL1Q9UK58 526 aaPredicted RBP16.06■□□□□ 0.16
TRERNA1-201ENST00000431460 LY75O60449 1722 aa16.05■□□□□ 0.16
TRERNA1-201ENST00000431460 PALLDQ8WX93 1383 aa16.05■□□□□ 0.16
TRERNA1-201ENST00000431460 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.05■□□□□ 0.16
TRERNA1-201ENST00000431460 PPP1R1BQ9UD71 204 aaPredicted RBP16.05■□□□□ 0.16
TRERNA1-201ENST00000431460 ITGB4P16144 1822 aa16.04■□□□□ 0.16
TRERNA1-201ENST00000431460 HMOX1P09601 288 aa16.04■□□□□ 0.16
TRERNA1-201ENST00000431460 PLEKHO1Q53GL0 409 aaPredicted RBP16.04■□□□□ 0.16
TRERNA1-201ENST00000431460 ZNF530Q6P9A1 599 aaPredicted RBP16.04■□□□□ 0.16
TRERNA1-201ENST00000431460 ATF5Q9Y2D1 282 aaPredicted RBP16.04■□□□□ 0.16
TRERNA1-201ENST00000431460 PIGBQ92521 554 aa16.03■□□□□ 0.16
TRERNA1-201ENST00000431460 TMOD3Q9NYL9 352 aa16.03■□□□□ 0.16
TRERNA1-201ENST00000431460 DIAPH1O60610 1272 aaKnown RBP16.02■□□□□ 0.16
TRERNA1-201ENST00000431460 NKX1-1Q15270 411 aaPredicted RBP16.02■□□□□ 0.16
TRERNA1-201ENST00000431460 RALBP1Q15311 655 aa16.02■□□□□ 0.16
TRERNA1-201ENST00000431460 C1orf141Q5JVX7 400 aa16.01■□□□□ 0.15
TRERNA1-201ENST00000431460 AKT1S1Q96B36 256 aa16.01■□□□□ 0.15
TRERNA1-201ENST00000431460 TFCP2L1Q9NZI6 479 aa16.01■□□□□ 0.15
TRERNA1-201ENST00000431460 KDRP35968 1356 aa16■□□□□ 0.15
TRERNA1-201ENST00000431460 U2SURPO15042 1029 aaKnown RBP16■□□□□ 0.15
TRERNA1-201ENST00000431460 AMOTQ4VCS5 1084 aa16■□□□□ 0.15
TRERNA1-201ENST00000431460 C5P01031 1676 aa15.99■□□□□ 0.15
TRERNA1-201ENST00000431460 TUBGCP6Q96RT7 1819 aa15.99■□□□□ 0.15
TRERNA1-201ENST00000431460 COL3A1P02461 1466 aaPredicted RBP15.99■□□□□ 0.15
TRERNA1-201ENST00000431460 MSH5O43196 834 aa15.99■□□□□ 0.15
TRERNA1-201ENST00000431460 PPP2R1AP30153 589 aa15.99■□□□□ 0.15
TRERNA1-201ENST00000431460 SMARCC1Q92922 1105 aaPredicted RBP15.99■□□□□ 0.15
TRERNA1-201ENST00000431460 ASAP1Q9ULH1 1129 aa15.99■□□□□ 0.15
TRERNA1-201ENST00000431460 KDM6AO15550 1401 aaPredicted RBP15.99■□□□□ 0.15
TRERNA1-201ENST00000431460 PLEKHG2Q9H7P9 1386 aa15.99■□□□□ 0.15
TRERNA1-201ENST00000431460 PNPLA7Q6ZV29 1317 aa15.98■□□□□ 0.15
TRERNA1-201ENST00000431460 HSP90AB1P08238 724 aaKnown RBP15.98■□□□□ 0.15
TRERNA1-201ENST00000431460 MTFR1LQ9H019 292 aa15.98■□□□□ 0.15
TRERNA1-201ENST00000431460 DCAF5Q96JK2 942 aa15.97■□□□□ 0.15
TRERNA1-201ENST00000431460 PTGER2P43116 358 aa15.96■□□□□ 0.15
TRERNA1-201ENST00000431460 CABP4P57796 275 aa15.96■□□□□ 0.15
TRERNA1-201ENST00000431460 PRKRIP1Q9H875 184 aaPredicted RBP15.96■□□□□ 0.15
TRERNA1-201ENST00000431460 LOC102724428A0A0B4J2F2 783 aa15.95■□□□□ 0.14
TRERNA1-201ENST00000431460 SIK1P57059 783 aa15.95■□□□□ 0.14
TRERNA1-201ENST00000431460 CFAP53Q96M91 514 aa15.95■□□□□ 0.14
TRERNA1-201ENST00000431460 ATG3Q9NT62 314 aa15.95■□□□□ 0.14
TRERNA1-201ENST00000431460 ERVV-2B6SEH9 535 aa15.94■□□□□ 0.14
TRERNA1-201ENST00000431460 PHF14O94880 888 aa15.94■□□□□ 0.14
TRERNA1-201ENST00000431460 SMIM5Q71RC9 77 aa15.94■□□□□ 0.14
TRERNA1-201ENST00000431460 AK7Q96M32 723 aa15.94■□□□□ 0.14
TRERNA1-201ENST00000431460 RBM42Q9BTD8 480 aaKnown RBP15.94■□□□□ 0.14
TRERNA1-201ENST00000431460 C4BP0C0L5 1744 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms