RNA–Protein interactions for RNA: ENST00000431155.1

GRAMD4-204, Transcript of GRAM domain containing 4, humanhuman

TSL 3

Gene GRAMD4, Length 311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD4-204ENST00000431155 TATP17735 454 aaPredicted RBP41.6■■■■■ 4.25
GRAMD4-204ENST00000431155 NHSQ6T4R5 1651 aa41.6■■■■■ 4.25
GRAMD4-204ENST00000431155 PER1O15534 1290 aaPredicted RBP41.59■■■■■ 4.25
GRAMD4-204ENST00000431155 NUP188Q5SRE5 1749 aa41.58■■■■■ 4.25
GRAMD4-204ENST00000431155 SHANK3Q9BYB0 1731 aa41.58■■■■■ 4.25
GRAMD4-204ENST00000431155 R3HDM1Q15032 1099 aaKnown RBP41.57■■■■■ 4.25
GRAMD4-204ENST00000431155 EIF4A2Q14240 407 aaKnown RBP41.56■■■■■ 4.24
GRAMD4-204ENST00000431155 EYA1Q99502 592 aa41.56■■■■■ 4.24
GRAMD4-204ENST00000431155 RGPD3A6NKT7 1758 aaPredicted RBP41.55■■■■■ 4.24
GRAMD4-204ENST00000431155 RGPD4Q7Z3J3 1758 aa41.55■■■■■ 4.24
GRAMD4-204ENST00000431155 NCAPD2Q15021 1401 aa41.52■■■■■ 4.24
GRAMD4-204ENST00000431155 CC2D1BQ5T0F9 858 aaKnown RBP41.5■■■■■ 4.23
GRAMD4-204ENST00000431155 PROM2Q8N271 834 aa41.49■■■■■ 4.23
GRAMD4-204ENST00000431155 NBPF14Q5TI25 921 aa41.48■■■■■ 4.23
GRAMD4-204ENST00000431155 SRCAPQ6ZRS2 3230 aa41.46■■■■■ 4.23
GRAMD4-204ENST00000431155 SYTL4Q96C24 671 aaPredicted RBP41.45■■■■■ 4.23
GRAMD4-204ENST00000431155 BTAF1O14981 1849 aa41.45■■■■■ 4.23
GRAMD4-204ENST00000431155 PCDH11XQ9BZA7 1347 aa41.44■■■■■ 4.23
GRAMD4-204ENST00000431155 PCDH11YQ9BZA8 1340 aa41.44■■■■■ 4.23
GRAMD4-204ENST00000431155 CNGB1Q14028 1251 aaPredicted RBP41.44■■■■■ 4.22
GRAMD4-204ENST00000431155 TXNRD1Q16881 649 aa41.44■■■■■ 4.22
GRAMD4-204ENST00000431155 DOT1LQ8TEK3 1739 aa41.44■■■■■ 4.22
GRAMD4-204ENST00000431155 PRIM1P49642 420 aaKnown RBP41.43■■■■■ 4.22
GRAMD4-204ENST00000431155 KAT6BQ8WYB5 2073 aa41.41■■■■■ 4.22
GRAMD4-204ENST00000431155 IGSF1Q8N6C5 1336 aa41.4■■■■■ 4.22
GRAMD4-204ENST00000431155 PKD1L3Q7Z443 1732 aa41.39■■■■■ 4.22
GRAMD4-204ENST00000431155 CYP27B1O15528 508 aa41.39■■■■■ 4.22
GRAMD4-204ENST00000431155 ANO8Q9HCE9 1232 aaPredicted RBP41.37■■■■■ 4.21
GRAMD4-204ENST00000431155 SPG7Q9UQ90 795 aa41.36■■■■■ 4.21
GRAMD4-204ENST00000431155 NPC1L1Q9UHC9 1359 aa41.36■■■■■ 4.21
GRAMD4-204ENST00000431155 MTHFSP49914 203 aa41.35■■■■■ 4.21
GRAMD4-204ENST00000431155 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP41.3■■■■■ 4.2
GRAMD4-204ENST00000431155 IL13P35225 146 aa41.29■■■■■ 4.2
GRAMD4-204ENST00000431155 AEBP1Q8IUX7 1158 aa41.27■■■■■ 4.2
GRAMD4-204ENST00000431155 LRP5O75197 1615 aa41.26■■■■■ 4.2
GRAMD4-204ENST00000431155 LRRC4BQ9NT99 713 aa41.24■■■■■ 4.19
GRAMD4-204ENST00000431155 STK32BQ9NY57 414 aa41.24■■■■■ 4.19
GRAMD4-204ENST00000431155 NKX1-1Q15270 411 aaPredicted RBP41.23■■■■■ 4.19
GRAMD4-204ENST00000431155 TOGARAM1Q9Y4F4 1720 aa41.23■■■■■ 4.19
GRAMD4-204ENST00000431155 SULT6B1Q6IMI4 303 aa41.22■■■■■ 4.19
GRAMD4-204ENST00000431155 PHKG2P15735 406 aa41.21■■■■■ 4.19
GRAMD4-204ENST00000431155 MPRIPQ6WCQ1 1025 aa41.21■■■■■ 4.19
GRAMD4-204ENST00000431155 IFNL2Q8IZJ0 200 aa41.21■■■■■ 4.19
GRAMD4-204ENST00000431155 PLEKHG2Q9H7P9 1386 aa41.21■■■■■ 4.19
GRAMD4-204ENST00000431155 SLC15A2Q16348 729 aa41.2■■■■■ 4.19
GRAMD4-204ENST00000431155 KCNQ4P56696 695 aa41.18■■■■■ 4.18
GRAMD4-204ENST00000431155 PAPPAQ13219 1627 aa41.18■■■■■ 4.18
GRAMD4-204ENST00000431155 PLEKHO1Q53GL0 409 aaPredicted RBP41.17■■■■■ 4.18
GRAMD4-204ENST00000431155 SLC27A3Q5K4L6 730 aa41.17■■■■■ 4.18
GRAMD4-204ENST00000431155 KDRP35968 1356 aa41.15■■■■■ 4.18
GRAMD4-204ENST00000431155 DIAPH1O60610 1272 aaKnown RBP41.15■■■■■ 4.18
GRAMD4-204ENST00000431155 PDGFDQ9GZP0 370 aaPredicted RBP41.15■■■■■ 4.18
GRAMD4-204ENST00000431155 LY75O60449 1722 aa41.14■■■■■ 4.18
GRAMD4-204ENST00000431155 ITGB4P16144 1822 aa41.13■■■■■ 4.17
GRAMD4-204ENST00000431155 ZNF827Q17R98 1081 aa41.12■■■■■ 4.17
GRAMD4-204ENST00000431155 AMOTQ4VCS5 1084 aa41.12■■■■■ 4.17
GRAMD4-204ENST00000431155 ZNF530Q6P9A1 599 aaPredicted RBP41.11■■■■■ 4.17
GRAMD4-204ENST00000431155 PIGBQ92521 554 aa41.11■■■■■ 4.17
GRAMD4-204ENST00000431155 CCNL1Q9UK58 526 aaPredicted RBP41.11■■■■■ 4.17
GRAMD4-204ENST00000431155 CASZ1Q86V15 1759 aa41.1■■■■■ 4.17
GRAMD4-204ENST00000431155 HMOX1P09601 288 aa41.1■■■■■ 4.17
GRAMD4-204ENST00000431155 COL3A1P02461 1466 aaPredicted RBP41.09■■■■■ 4.17
GRAMD4-204ENST00000431155 PALLDQ8WX93 1383 aa41.07■■■■■ 4.16
GRAMD4-204ENST00000431155 TMOD3Q9NYL9 352 aa41.06■■■■■ 4.16
GRAMD4-204ENST00000431155 AKT1S1Q96B36 256 aa41.05■■■■■ 4.16
GRAMD4-204ENST00000431155 SPON1Q9HCB6 807 aa41.05■■■■■ 4.16
GRAMD4-204ENST00000431155 HSP90AB1P08238 724 aaKnown RBP41.03■■■■■ 4.16
GRAMD4-204ENST00000431155 ZBTB7AO95365 584 aa41.02■■■■■ 4.16
GRAMD4-204ENST00000431155 SMARCC1Q92922 1105 aaPredicted RBP41.02■■■■■ 4.16
GRAMD4-204ENST00000431155 DCAF5Q96JK2 942 aa41.02■■■■■ 4.16
GRAMD4-204ENST00000431155 PPP2R1AP30153 589 aa41.01■■■■■ 4.16
GRAMD4-204ENST00000431155 C1orf141Q5JVX7 400 aa41.01■■■■■ 4.16
GRAMD4-204ENST00000431155 U2SURPO15042 1029 aaKnown RBP41■■■■■ 4.15
GRAMD4-204ENST00000431155 KDM6AO15550 1401 aaPredicted RBP40.99■■■■■ 4.15
GRAMD4-204ENST00000431155 CFAP53Q96M91 514 aa40.97■■■■■ 4.15
GRAMD4-204ENST00000431155 ASAP1Q9ULH1 1129 aa40.97■■■■■ 4.15
GRAMD4-204ENST00000431155 ERVV-2B6SEH9 535 aa40.96■■■■■ 4.15
GRAMD4-204ENST00000431155 TFCP2L1Q9NZI6 479 aa40.95■■■■■ 4.15
GRAMD4-204ENST00000431155 ATF5Q9Y2D1 282 aaPredicted RBP40.95■■■■■ 4.15
GRAMD4-204ENST00000431155 C5P01031 1676 aa40.91■■■■■ 4.14
GRAMD4-204ENST00000431155 CABP4P57796 275 aa40.91■■■■■ 4.14
GRAMD4-204ENST00000431155 ATG3Q9NT62 314 aa40.91■■■■■ 4.14
GRAMD4-204ENST00000431155 PNPLA7Q6ZV29 1317 aa40.91■■■■■ 4.14
GRAMD4-204ENST00000431155 PPP1R1BQ9UD71 204 aaPredicted RBP40.9■■■■■ 4.14
GRAMD4-204ENST00000431155 AKAP4Q5JQC9 854 aa40.89■■■■■ 4.14
GRAMD4-204ENST00000431155 MTFR1LQ9H019 292 aa40.89■■■■■ 4.14
GRAMD4-204ENST00000431155 DDX10Q13206 875 aaKnown RBP40.88■■■■■ 4.13
GRAMD4-204ENST00000431155 MTHFSDQ2M296 383 aaKnown RBP40.88■■■■■ 4.13
GRAMD4-204ENST00000431155 TUBGCP6Q96RT7 1819 aa40.88■■■■■ 4.13
GRAMD4-204ENST00000431155 LOC102724428A0A0B4J2F2 783 aa40.87■■■■■ 4.13
GRAMD4-204ENST00000431155 SIK1P57059 783 aa40.87■■■■■ 4.13
GRAMD4-204ENST00000431155 QSER1Q2KHR3 1735 aa40.87■■■■■ 4.13
GRAMD4-204ENST00000431155 PTGER2P43116 358 aa40.85■■■■■ 4.13
GRAMD4-204ENST00000431155 TAF1LQ8IZX4 1826 aa40.85■■■■■ 4.13
GRAMD4-204ENST00000431155 ZEB1P37275 1124 aaPredicted RBP40.82■■■■■ 4.13
GRAMD4-204ENST00000431155 NFATC2IPQ8NCF5 419 aa40.82■■■■■ 4.13
GRAMD4-204ENST00000431155 LGR6Q9HBX8 967 aa40.82■■■■■ 4.13
GRAMD4-204ENST00000431155 NUDCQ9Y266 331 aa40.82■■■■■ 4.13
GRAMD4-204ENST00000431155 C4BP0C0L5 1744 aa40.8■■■■■ 4.12
GRAMD4-204ENST00000431155 HMGB2P26583 209 aaKnown RBP40.8■■■■■ 4.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms