RNA–Protein interactions for RNA: ENST00000431116.2

HMGN1P38-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 38, humanhuman

BASIC

Gene HMGN1P38, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P38-201ENST00000431116 PROM2Q8N271 834 aa14.11□□□□□ -0.15
HMGN1P38-201ENST00000431116 PAPPAQ13219 1627 aa14.11□□□□□ -0.15
HMGN1P38-201ENST00000431116 CCER1Q8TC90 406 aaPredicted RBP14.1□□□□□ -0.15
HMGN1P38-201ENST00000431116 DDX54Q8TDD1 881 aaKnown RBP14.1□□□□□ -0.15
HMGN1P38-201ENST00000431116 CARD14Q9BXL6 1004 aa14.1□□□□□ -0.15
HMGN1P38-201ENST00000431116 FLT4P35916 1363 aa14.09□□□□□ -0.15
HMGN1P38-201ENST00000431116 MAP2P11137 1827 aaKnown RBP14.08□□□□□ -0.15
HMGN1P38-201ENST00000431116 USHBP1Q8N6Y0 703 aa14.08□□□□□ -0.16
HMGN1P38-201ENST00000431116 POLR3GLQ9BT43 218 aa14.08□□□□□ -0.16
HMGN1P38-201ENST00000431116 SPON1Q9HCB6 807 aa14.08□□□□□ -0.16
HMGN1P38-201ENST00000431116 STK32BQ9NY57 414 aa14.08□□□□□ -0.16
HMGN1P38-201ENST00000431116 INSRP06213 1382 aa14.08□□□□□ -0.16
HMGN1P38-201ENST00000431116 KIF24Q5T7B8 1368 aa14.08□□□□□ -0.16
HMGN1P38-201ENST00000431116 HSP90AB2PQ58FF8 381 aa14.07□□□□□ -0.16
HMGN1P38-201ENST00000431116 NBPF6Q5VWK0 638 aa14.07□□□□□ -0.16
HMGN1P38-201ENST00000431116 NBPF4Q96M43 638 aa14.07□□□□□ -0.16
HMGN1P38-201ENST00000431116 EIF4G2P78344 907 aaKnown RBP eCLIP14.06□□□□□ -0.16
HMGN1P38-201ENST00000431116 PDGFDQ9GZP0 370 aaPredicted RBP14.06□□□□□ -0.16
HMGN1P38-201ENST00000431116 PPP1R1BQ9UD71 204 aaPredicted RBP14.06□□□□□ -0.16
HMGN1P38-201ENST00000431116 CGNL1Q0VF96 1302 aa14.06□□□□□ -0.16
HMGN1P38-201ENST00000431116 LY75O60449 1722 aa14.06□□□□□ -0.16
HMGN1P38-201ENST00000431116 PKD1L3Q7Z443 1732 aa14.05□□□□□ -0.16
HMGN1P38-201ENST00000431116 SLC15A2Q16348 729 aa14.05□□□□□ -0.16
HMGN1P38-201ENST00000431116 ZCRB1Q8TBF4 217 aaKnown RBP14.05□□□□□ -0.16
HMGN1P38-201ENST00000431116 RAPGEF4Q8WZA2 1011 aa14.05□□□□□ -0.16
HMGN1P38-201ENST00000431116 SYTL4Q96C24 671 aaPredicted RBP14.05□□□□□ -0.16
HMGN1P38-201ENST00000431116 EMILIN1Q9Y6C2 1016 aa14.05□□□□□ -0.16
HMGN1P38-201ENST00000431116 HSPA5P11021 654 aaKnown RBP14.04□□□□□ -0.16
HMGN1P38-201ENST00000431116 QSER1Q2KHR3 1735 aa14.04□□□□□ -0.16
HMGN1P38-201ENST00000431116 TUBGCP6Q96RT7 1819 aa14.04□□□□□ -0.16
HMGN1P38-201ENST00000431116 PPM1GO15355 546 aaPredicted RBP14.03□□□□□ -0.16
HMGN1P38-201ENST00000431116 ZBTB7AO95365 584 aa14.03□□□□□ -0.16
HMGN1P38-201ENST00000431116 RNF39Q9H2S5 420 aa14.03□□□□□ -0.16
HMGN1P38-201ENST00000431116 NSD2O96028 1365 aa14.03□□□□□ -0.16
HMGN1P38-201ENST00000431116 TOGARAM1Q9Y4F4 1720 aa14.02□□□□□ -0.16
HMGN1P38-201ENST00000431116 TATP17735 454 aaPredicted RBP14.02□□□□□ -0.17
HMGN1P38-201ENST00000431116 PCDH11XQ9BZA7 1347 aa14.01□□□□□ -0.17
HMGN1P38-201ENST00000431116 PCDH11YQ9BZA8 1340 aa14.01□□□□□ -0.17
HMGN1P38-201ENST00000431116 PRIM1P49642 420 aaKnown RBP14.01□□□□□ -0.17
HMGN1P38-201ENST00000431116 ITGB4P16144 1822 aa14.01□□□□□ -0.17
HMGN1P38-201ENST00000431116 NCAPD2Q15021 1401 aa14□□□□□ -0.17
HMGN1P38-201ENST00000431116 ZNF827Q17R98 1081 aa14□□□□□ -0.17
HMGN1P38-201ENST00000431116 LRRC4BQ9NT99 713 aa14□□□□□ -0.17
HMGN1P38-201ENST00000431116 ATF5Q9Y2D1 282 aaPredicted RBP14□□□□□ -0.17
HMGN1P38-201ENST00000431116 SLC27A3Q5K4L6 730 aa13.99□□□□□ -0.17
HMGN1P38-201ENST00000431116 C5P01031 1676 aa13.98□□□□□ -0.17
HMGN1P38-201ENST00000431116 WASHC2AQ641Q2 1341 aa13.98□□□□□ -0.17
HMGN1P38-201ENST00000431116 PTGER2P43116 358 aa13.98□□□□□ -0.17
HMGN1P38-201ENST00000431116 TNNT2P45379 298 aaPredicted RBP13.98□□□□□ -0.17
HMGN1P38-201ENST00000431116 MTFR1LQ9H019 292 aa13.98□□□□□ -0.17
HMGN1P38-201ENST00000431116 KCNQ4P56696 695 aa13.97□□□□□ -0.17
HMGN1P38-201ENST00000431116 PANK3Q9H999 370 aa13.97□□□□□ -0.17
HMGN1P38-201ENST00000431116 POLKQ9UBT6 870 aa13.97□□□□□ -0.17
HMGN1P38-201ENST00000431116 TAF1LQ8IZX4 1826 aa13.97□□□□□ -0.17
HMGN1P38-201ENST00000431116 CYP27B1O15528 508 aa13.96□□□□□ -0.17
HMGN1P38-201ENST00000431116 AKT1S1Q96B36 256 aa13.96□□□□□ -0.17
HMGN1P38-201ENST00000431116 CCNL1Q9UK58 526 aaPredicted RBP13.96□□□□□ -0.17
HMGN1P38-201ENST00000431116 EYA1Q99502 592 aa13.95□□□□□ -0.18
HMGN1P38-201ENST00000431116 COL24A1Q17RW2 1714 aa13.95□□□□□ -0.18
HMGN1P38-201ENST00000431116 PNPLA7Q6ZV29 1317 aa13.94□□□□□ -0.18
HMGN1P38-201ENST00000431116 SGIP1Q9BQI5 828 aa13.94□□□□□ -0.18
HMGN1P38-201ENST00000431116 EIF4A2Q14240 407 aaKnown RBP13.93□□□□□ -0.18
HMGN1P38-201ENST00000431116 MPRIPQ6WCQ1 1025 aa13.93□□□□□ -0.18
HMGN1P38-201ENST00000431116 FHDC1Q9C0D6 1143 aaPredicted RBP13.93□□□□□ -0.18
HMGN1P38-201ENST00000431116 TFCP2L1Q9NZI6 479 aa13.93□□□□□ -0.18
HMGN1P38-201ENST00000431116 SPG7Q9UQ90 795 aa13.93□□□□□ -0.18
HMGN1P38-201ENST00000431116 PALLDQ8WX93 1383 aa13.93□□□□□ -0.18
HMGN1P38-201ENST00000431116 C4BP0C0L5 1744 aa13.91□□□□□ -0.18
HMGN1P38-201ENST00000431116 MORC1Q86VD1 984 aa13.91□□□□□ -0.18
HMGN1P38-201ENST00000431116 KIF7Q2M1P5 1343 aa13.9□□□□□ -0.18
HMGN1P38-201ENST00000431116 SLC16A10Q8TF71 515 aa13.9□□□□□ -0.18
HMGN1P38-201ENST00000431116 ARXQ96QS3 562 aa13.9□□□□□ -0.18
HMGN1P38-201ENST00000431116 SYT17Q9BSW7 474 aa13.9□□□□□ -0.18
HMGN1P38-201ENST00000431116 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.9□□□□□ -0.18
HMGN1P38-201ENST00000431116 KNSTRNQ9Y448 316 aa13.9□□□□□ -0.18
HMGN1P38-201ENST00000431116 IGSF1Q8N6C5 1336 aa13.9□□□□□ -0.19
HMGN1P38-201ENST00000431116 PLEKHG2Q9H7P9 1386 aa13.89□□□□□ -0.19
HMGN1P38-201ENST00000431116 NKX1-1Q15270 411 aaPredicted RBP13.89□□□□□ -0.19
HMGN1P38-201ENST00000431116 UBR3Q6ZT12 1888 aa13.89□□□□□ -0.19
HMGN1P38-201ENST00000431116 MAP3K5Q99683 1374 aa13.88□□□□□ -0.19
HMGN1P38-201ENST00000431116 PHKG2P15735 406 aa13.88□□□□□ -0.19
HMGN1P38-201ENST00000431116 POLD1P28340 1107 aa13.88□□□□□ -0.19
HMGN1P38-201ENST00000431116 IFNL2Q8IZJ0 200 aa13.88□□□□□ -0.19
HMGN1P38-201ENST00000431116 KLHL34Q8N239 644 aa13.88□□□□□ -0.19
HMGN1P38-201ENST00000431116 PIGBQ92521 554 aa13.88□□□□□ -0.19
HMGN1P38-201ENST00000431116 SMARCC1Q92922 1105 aaPredicted RBP13.88□□□□□ -0.19
HMGN1P38-201ENST00000431116 YY1P25490 414 aa13.87□□□□□ -0.19
HMGN1P38-201ENST00000431116 TMOD3Q9NYL9 352 aa13.87□□□□□ -0.19
HMGN1P38-201ENST00000431116 CHD4Q14839 1912 aa13.86□□□□□ -0.19
HMGN1P38-201ENST00000431116 C1QBPQ07021 282 aaKnown RBP13.86□□□□□ -0.19
HMGN1P38-201ENST00000431116 COL23A1Q86Y22 540 aaPredicted RBP13.86□□□□□ -0.19
HMGN1P38-201ENST00000431116 AMER1Q5JTC6 1135 aaPredicted RBP13.85□□□□□ -0.19
HMGN1P38-201ENST00000431116 HMGB2P26583 209 aaKnown RBP13.84□□□□□ -0.19
HMGN1P38-201ENST00000431116 CACNB1Q02641 598 aaPredicted RBP13.84□□□□□ -0.19
HMGN1P38-201ENST00000431116 AEBP1Q8IUX7 1158 aa13.84□□□□□ -0.19
HMGN1P38-201ENST00000431116 AK7Q96M32 723 aa13.84□□□□□ -0.19
HMGN1P38-201ENST00000431116 PLEKHO1Q53GL0 409 aaPredicted RBP13.83□□□□□ -0.2
HMGN1P38-201ENST00000431116 MSL1Q68DK7 614 aa13.83□□□□□ -0.2
HMGN1P38-201ENST00000431116 ZNF530Q6P9A1 599 aaPredicted RBP13.83□□□□□ -0.2
HMGN1P38-201ENST00000431116 VIRMAQ69YN4 1812 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms