RNA–Protein interactions for RNA: ENST00000430687.1

CDC42EP1-203, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-203ENST00000430687 WNK3Q9BYP7 1800 aa24.18■■□□□ 1.46
CDC42EP1-203ENST00000430687 MEGF6O75095 1541 aa24.18■■□□□ 1.46
CDC42EP1-203ENST00000430687 HMOX1P09601 288 aa24.17■■□□□ 1.46
CDC42EP1-203ENST00000430687 PDE3BQ13370 1112 aa24.17■■□□□ 1.46
CDC42EP1-203ENST00000430687 ZCRB1Q8TBF4 217 aaKnown RBP24.16■■□□□ 1.46
CDC42EP1-203ENST00000430687 TNS2Q63HR2 1409 aa24.16■■□□□ 1.46
CDC42EP1-203ENST00000430687 KRT27Q7Z3Y8 459 aa24.15■■□□□ 1.46
CDC42EP1-203ENST00000430687 MRS2Q9HD23 443 aa24.15■■□□□ 1.46
CDC42EP1-203ENST00000430687 SPG7Q9UQ90 795 aa24.15■■□□□ 1.46
CDC42EP1-203ENST00000430687 WDR43Q15061 677 aaKnown RBP eCLIP24.14■■□□□ 1.45
CDC42EP1-203ENST00000430687 AMOTQ4VCS5 1084 aa24.14■■□□□ 1.45
CDC42EP1-203ENST00000430687 RSPH6AQ9H0K4 717 aa24.14■■□□□ 1.45
CDC42EP1-203ENST00000430687 PNNQ9H307 717 aaKnown RBP24.14■■□□□ 1.45
CDC42EP1-203ENST00000430687 LRRC37A3O60309 1634 aa24.13■■□□□ 1.45
CDC42EP1-203ENST00000430687 CCDC184Q52MB2 194 aa24.13■■□□□ 1.45
CDC42EP1-203ENST00000430687 PLEKHO1Q53GL0 409 aaPredicted RBP24.13■■□□□ 1.45
CDC42EP1-203ENST00000430687 CCER2I3L3R5 266 aa24.12■■□□□ 1.45
CDC42EP1-203ENST00000430687 PCDH11XQ9BZA7 1347 aa24.1■■□□□ 1.45
CDC42EP1-203ENST00000430687 PCDH11YQ9BZA8 1340 aa24.1■■□□□ 1.45
CDC42EP1-203ENST00000430687 PRKAR2BP31323 418 aa24.09■■□□□ 1.45
CDC42EP1-203ENST00000430687 PNISRQ8TF01 805 aaKnown RBP24.09■■□□□ 1.45
CDC42EP1-203ENST00000430687 MARCH10Q8NA82 808 aaPredicted RBP24.08■■□□□ 1.45
CDC42EP1-203ENST00000430687 ADAMTS8Q9UP79 889 aa24.08■■□□□ 1.45
CDC42EP1-203ENST00000430687 PKD1L3Q7Z443 1732 aa24.07■■□□□ 1.44
CDC42EP1-203ENST00000430687 NEFMP07197 916 aa24.07■■□□□ 1.44
CDC42EP1-203ENST00000430687 DDX54Q8TDD1 881 aaKnown RBP24.07■■□□□ 1.44
CDC42EP1-203ENST00000430687 BCL9O00512 1426 aa24.07■■□□□ 1.44
CDC42EP1-203ENST00000430687 FAM196AQ6ZSG2 479 aa24.06■■□□□ 1.44
CDC42EP1-203ENST00000430687 MIER1Q8N108 512 aa24.06■■□□□ 1.44
CDC42EP1-203ENST00000430687 PLEKHF1Q96S99 279 aa24.06■■□□□ 1.44
CDC42EP1-203ENST00000430687 BRWD3Q6RI45 1802 aa24.05■■□□□ 1.44
CDC42EP1-203ENST00000430687 IFNL2Q8IZJ0 200 aa24.05■■□□□ 1.44
CDC42EP1-203ENST00000430687 CYP27B1O15528 508 aa24.04■■□□□ 1.44
CDC42EP1-203ENST00000430687 GAS2L2Q8NHY3 880 aa24.04■■□□□ 1.44
CDC42EP1-203ENST00000430687 PHKG2P15735 406 aa24.03■■□□□ 1.44
CDC42EP1-203ENST00000430687 NKX1-1Q15270 411 aaPredicted RBP24.03■■□□□ 1.44
CDC42EP1-203ENST00000430687 MTHFSDQ2M296 383 aaKnown RBP24.03■■□□□ 1.44
CDC42EP1-203ENST00000430687 ZNF530Q6P9A1 599 aaPredicted RBP24.03■■□□□ 1.44
CDC42EP1-203ENST00000430687 PHACTR3Q96KR7 559 aa24.03■■□□□ 1.44
CDC42EP1-203ENST00000430687 HSP90AB1P08238 724 aaKnown RBP24.02■■□□□ 1.44
CDC42EP1-203ENST00000430687 C1orf141Q5JVX7 400 aa24.02■■□□□ 1.44
CDC42EP1-203ENST00000430687 AKAP4Q5JQC9 854 aa24.01■■□□□ 1.43
CDC42EP1-203ENST00000430687 RUNDC1Q96C34 613 aa24.01■■□□□ 1.43
CDC42EP1-203ENST00000430687 MAPK8IP3Q9UPT6 1336 aa24.01■■□□□ 1.43
CDC42EP1-203ENST00000430687 SHANK3Q9BYB0 1731 aa24.01■■□□□ 1.43
CDC42EP1-203ENST00000430687 FAM182BQ5T319 152 aa24■■□□□ 1.43
CDC42EP1-203ENST00000430687 DCAF5Q96JK2 942 aa23.97■■□□□ 1.43
CDC42EP1-203ENST00000430687 GNAT3A8MTJ3 354 aa23.95■■□□□ 1.42
CDC42EP1-203ENST00000430687 HTATSF1O43719 755 aaKnown RBP23.94■■□□□ 1.42
CDC42EP1-203ENST00000430687 NFE2L2Q16236 605 aa23.94■■□□□ 1.42
CDC42EP1-203ENST00000430687 CCDC146Q8IYE0 955 aa23.94■■□□□ 1.42
CDC42EP1-203ENST00000430687 MAP3K5Q99683 1374 aa23.93■■□□□ 1.42
CDC42EP1-203ENST00000430687 CCDC125Q86Z20 511 aa23.93■■□□□ 1.42
CDC42EP1-203ENST00000430687 FAM9BQ8IZU0 186 aa23.93■■□□□ 1.42
CDC42EP1-203ENST00000430687 ERVV-2B6SEH9 535 aa23.92■■□□□ 1.42
CDC42EP1-203ENST00000430687 BCL11BQ9C0K0 894 aaPredicted RBP23.92■■□□□ 1.42
CDC42EP1-203ENST00000430687 TMPOP42166 694 aaKnown RBP23.91■■□□□ 1.42
CDC42EP1-203ENST00000430687 MPRIPQ6WCQ1 1025 aa23.9■■□□□ 1.42
CDC42EP1-203ENST00000430687 RNMTO43148 476 aaKnown RBP23.89■■□□□ 1.41
CDC42EP1-203ENST00000430687 TRIM37O94972 964 aa23.89■■□□□ 1.41
CDC42EP1-203ENST00000430687 PRIM1P49642 420 aaKnown RBP23.89■■□□□ 1.41
CDC42EP1-203ENST00000430687 RTF1Q92541 710 aaKnown RBP23.89■■□□□ 1.41
CDC42EP1-203ENST00000430687 ACSBG1Q96GR2 724 aa23.89■■□□□ 1.41
CDC42EP1-203ENST00000430687 KDM6AO15550 1401 aaPredicted RBP23.89■■□□□ 1.41
CDC42EP1-203ENST00000430687 KCNQ2O43526 872 aa23.87■■□□□ 1.41
CDC42EP1-203ENST00000430687 RIPK4P57078 832 aa23.87■■□□□ 1.41
CDC42EP1-203ENST00000430687 LMOD3Q0VAK6 560 aa23.87■■□□□ 1.41
CDC42EP1-203ENST00000430687 NCBP3Q53F19 620 aaKnown RBP23.87■■□□□ 1.41
CDC42EP1-203ENST00000430687 LGR6Q9HBX8 967 aa23.87■■□□□ 1.41
CDC42EP1-203ENST00000430687 APAF1O14727 1248 aa23.86■■□□□ 1.41
CDC42EP1-203ENST00000430687 IL17REQ8NFR9 667 aa23.86■■□□□ 1.41
CDC42EP1-203ENST00000430687 UPF1Q92900 1129 aaKnown RBP eCLIP23.86■■□□□ 1.41
CDC42EP1-203ENST00000430687 CABP4P57796 275 aa23.85■■□□□ 1.41
CDC42EP1-203ENST00000430687 SF3B2Q13435 895 aaKnown RBP23.85■■□□□ 1.41
CDC42EP1-203ENST00000430687 SYTL4Q96C24 671 aaPredicted RBP23.85■■□□□ 1.41
CDC42EP1-203ENST00000430687 TMOD3Q9NYL9 352 aa23.85■■□□□ 1.41
CDC42EP1-203ENST00000430687 CEMIPQ8WUJ3 1361 aa23.85■■□□□ 1.41
CDC42EP1-203ENST00000430687 NHSQ6T4R5 1651 aa23.85■■□□□ 1.41
CDC42EP1-203ENST00000430687 ADAMTS7Q9UKP4 1686 aa23.85■■□□□ 1.41
CDC42EP1-203ENST00000430687 SBF2Q86WG5 1849 aa23.84■■□□□ 1.41
CDC42EP1-203ENST00000430687 NGEFQ8N5V2 710 aa23.83■■□□□ 1.41
CDC42EP1-203ENST00000430687 SLC52A2Q9HAB3 445 aa23.83■■□□□ 1.41
CDC42EP1-203ENST00000430687 DOT1LQ8TEK3 1739 aa23.83■■□□□ 1.41
CDC42EP1-203ENST00000430687 PIGBQ92521 554 aa23.82■■□□□ 1.4
CDC42EP1-203ENST00000430687 RRP7AQ9Y3A4 280 aaKnown RBP23.82■■□□□ 1.4
CDC42EP1-203ENST00000430687 TOGARAM1Q9Y4F4 1720 aa23.81■■□□□ 1.4
CDC42EP1-203ENST00000430687 MRC1P22897 1456 aa23.81■■□□□ 1.4
CDC42EP1-203ENST00000430687 APBA3O96018 575 aa23.81■■□□□ 1.4
CDC42EP1-203ENST00000430687 TEFQ10587 303 aa23.81■■□□□ 1.4
CDC42EP1-203ENST00000430687 NEUROD2Q15784 382 aa23.81■■□□□ 1.4
CDC42EP1-203ENST00000430687 PTF1AQ7RTS3 328 aa23.81■■□□□ 1.4
CDC42EP1-203ENST00000430687 NFATC2IPQ8NCF5 419 aa23.81■■□□□ 1.4
CDC42EP1-203ENST00000430687 SCN11AQ9UI33 1791 aa23.8■■□□□ 1.4
CDC42EP1-203ENST00000430687 PLSCR1O15162 318 aa23.8■■□□□ 1.4
CDC42EP1-203ENST00000430687 MCM10Q7L590 875 aa23.8■■□□□ 1.4
CDC42EP1-203ENST00000430687 TRIM35Q9UPQ4 493 aa23.8■■□□□ 1.4
CDC42EP1-203ENST00000430687 CCDC27Q2M243 656 aa23.79■■□□□ 1.4
CDC42EP1-203ENST00000430687 BAG6P46379 1132 aa23.78■■□□□ 1.4
CDC42EP1-203ENST00000430687 DCTN1Q14203 1278 aa23.78■■□□□ 1.4
CDC42EP1-203ENST00000430687 SMARCC1Q92922 1105 aaPredicted RBP23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms