RNA–Protein interactions for RNA: ENST00000430321.5

UBR3-204, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,411 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-204ENST00000430321 RNF41Q9H4P4 317 aaPredicted RBP7.05□□□□□ -1.28
UBR3-204ENST00000430321 PHAXQ9H814 394 aaKnown RBP7.05□□□□□ -1.28
UBR3-204ENST00000430321 ZNF608Q9ULD9 1512 aaPredicted RBP7.05□□□□□ -1.28
UBR3-204ENST00000430321 SHANK2Q9UPX8 1470 aa7.05□□□□□ -1.28
UBR3-204ENST00000430321 CDC45O75419 566 aa7.05□□□□□ -1.28
UBR3-204ENST00000430321 PRKCSHP14314 528 aaPredicted RBP7.05□□□□□ -1.28
UBR3-204ENST00000430321 TNNI2P48788 182 aa7.05□□□□□ -1.28
UBR3-204ENST00000430321 ARAP1Q96P48 1450 aa7.05□□□□□ -1.28
UBR3-204ENST00000430321 RUSC2Q8N2Y8 1516 aa7.04□□□□□ -1.28
UBR3-204ENST00000430321 BAG3O95817 575 aa7.04□□□□□ -1.28
UBR3-204ENST00000430321 NUTM2GQ5VZR2 741 aa7.04□□□□□ -1.28
UBR3-204ENST00000430321 APBB1IPQ7Z5R6 666 aaPredicted RBP7.04□□□□□ -1.28
UBR3-204ENST00000430321 MAGI2Q86UL8 1455 aa7.04□□□□□ -1.28
UBR3-204ENST00000430321 ANKRD36BQ8N2N9 1353 aa7.04□□□□□ -1.28
UBR3-204ENST00000430321 CCDC69A6NI79 296 aa7.04□□□□□ -1.28
UBR3-204ENST00000430321 TMEM132EQ6IEE7 984 aa7.04□□□□□ -1.28
UBR3-204ENST00000430321 CCDC12Q8WUD4 166 aaPredicted RBP7.04□□□□□ -1.28
UBR3-204ENST00000430321 ZNF644Q9H582 1327 aaPredicted RBP7.04□□□□□ -1.28
UBR3-204ENST00000430321 KIF20AO95235 890 aa7.04□□□□□ -1.28
UBR3-204ENST00000430321 KRT18P05783 430 aaKnown RBP7.04□□□□□ -1.28
UBR3-204ENST00000430321 HMGB1P09429 215 aaKnown RBP7.04□□□□□ -1.28
UBR3-204ENST00000430321 ANKRD18BA2A2Z9 1011 aa7.04□□□□□ -1.28
UBR3-204ENST00000430321 SSFA2P28290 1259 aa7.04□□□□□ -1.28
UBR3-204ENST00000430321 PRKAR2BP31323 418 aa7.04□□□□□ -1.28
UBR3-204ENST00000430321 TWISTNBQ3B726 338 aaPredicted RBP7.04□□□□□ -1.28
UBR3-204ENST00000430321 RBM27Q9P2N5 1060 aaKnown RBP7.04□□□□□ -1.28
UBR3-204ENST00000430321 SCAF11Q99590 1463 aaKnown RBP7.04□□□□□ -1.28
UBR3-204ENST00000430321 PES1O00541 588 aaKnown RBP7.03□□□□□ -1.28
UBR3-204ENST00000430321 IRX6P78412 446 aaPredicted RBP7.03□□□□□ -1.28
UBR3-204ENST00000430321 NUCB2P80303 420 aa7.03□□□□□ -1.28
UBR3-204ENST00000430321 CEP131Q9UPN4 1083 aa7.03□□□□□ -1.28
UBR3-204ENST00000430321 CTTNBP2Q8WZ74 1663 aa7.03□□□□□ -1.28
UBR3-204ENST00000430321 CCP110O43303 1012 aa7.03□□□□□ -1.28
UBR3-204ENST00000430321 ADAMTS2O95450 1211 aa7.03□□□□□ -1.28
UBR3-204ENST00000430321 MCTP1Q6DN14 999 aa7.03□□□□□ -1.28
UBR3-204ENST00000430321 ANKRD18AQ8IVF6 992 aa7.03□□□□□ -1.28
UBR3-204ENST00000430321 BCL2L13Q9BXK5 485 aa7.03□□□□□ -1.28
UBR3-204ENST00000430321 MAGEC2Q9UBF1 373 aaPredicted RBP7.03□□□□□ -1.28
UBR3-204ENST00000430321 SMC3Q9UQE7 1217 aa7.03□□□□□ -1.28
UBR3-204ENST00000430321 NOP58Q9Y2X3 529 aaKnown RBP7.03□□□□□ -1.28
UBR3-204ENST00000430321 ZFYVE16Q7Z3T8 1539 aa7.03□□□□□ -1.28
UBR3-204ENST00000430321 CCDC196A0A1B0GTZ2 297 aa7.03□□□□□ -1.28
UBR3-204ENST00000430321 SMC2O95347 1197 aa7.03□□□□□ -1.28
UBR3-204ENST00000430321 CDK13Q14004 1512 aaKnown RBP7.03□□□□□ -1.28
UBR3-204ENST00000430321 SULT6B1Q6IMI4 303 aa7.03□□□□□ -1.28
UBR3-204ENST00000430321 AEBP1Q8IUX7 1158 aa7.03□□□□□ -1.28
UBR3-204ENST00000430321 JDP2Q8WYK2 163 aa7.03□□□□□ -1.28
UBR3-204ENST00000430321 FERMT2Q96AC1 680 aa7.03□□□□□ -1.28
UBR3-204ENST00000430321 UQCRFS1P1P0C7P4 283 aa7.02□□□□□ -1.28
UBR3-204ENST00000430321 PLCG2P16885 1265 aa7.02□□□□□ -1.28
UBR3-204ENST00000430321 TAF7Q15545 349 aaPredicted RBP7.02□□□□□ -1.28
UBR3-204ENST00000430321 RAB34Q9BZG1 259 aa7.02□□□□□ -1.28
UBR3-204ENST00000430321 SEC63Q9UGP8 760 aaKnown RBP7.02□□□□□ -1.28
UBR3-204ENST00000430321 PDZRN3Q9UPQ7 1066 aa7.02□□□□□ -1.28
UBR3-204ENST00000430321 TBX22Q9Y458 520 aa7.02□□□□□ -1.28
UBR3-204ENST00000430321 KIAA0556O60303 1618 aa7.02□□□□□ -1.29
UBR3-204ENST00000430321 YEATS2Q9ULM3 1422 aa7.02□□□□□ -1.29
UBR3-204ENST00000430321 APAF1O14727 1248 aa7.02□□□□□ -1.29
UBR3-204ENST00000430321 DDB1Q16531 1140 aa7.02□□□□□ -1.29
UBR3-204ENST00000430321 PAF1Q8N7H5 531 aa7.02□□□□□ -1.29
UBR3-204ENST00000430321 PYM1Q9BRP8 204 aaKnown RBP7.02□□□□□ -1.29
UBR3-204ENST00000430321 PRKRIP1Q9H875 184 aaPredicted RBP7.02□□□□□ -1.29
UBR3-204ENST00000430321 RAI14Q9P0K7 980 aa7.02□□□□□ -1.29
UBR3-204ENST00000430321 FYB1O15117 783 aa7.02□□□□□ -1.29
UBR3-204ENST00000430321 PLIN1O60240 522 aa7.02□□□□□ -1.29
UBR3-204ENST00000430321 HMOX1P09601 288 aa7.02□□□□□ -1.29
UBR3-204ENST00000430321 ZNF76P36508 570 aa7.02□□□□□ -1.29
UBR3-204ENST00000430321 MAP3K12Q12852 859 aa7.02□□□□□ -1.29
UBR3-204ENST00000430321 CCDC152Q4G0S7 254 aa7.02□□□□□ -1.29
UBR3-204ENST00000430321 TNPO1Q92973 898 aaKnown RBP7.02□□□□□ -1.29
UBR3-204ENST00000430321 UBAC1Q9BSL1 405 aa7.02□□□□□ -1.29
UBR3-204ENST00000430321 ANKIB1Q9P2G1 1089 aa7.02□□□□□ -1.29
UBR3-204ENST00000430321 PCF11O94913 1555 aaKnown RBP7.02□□□□□ -1.29
UBR3-204ENST00000430321 PPP1R12BO60237 982 aaPredicted RBP7.02□□□□□ -1.29
UBR3-204ENST00000430321 DZIP1Q86YF9 867 aaKnown RBP7.02□□□□□ -1.29
UBR3-204ENST00000430321 SH2D4AQ9H788 454 aa7.02□□□□□ -1.29
UBR3-204ENST00000430321 IFT57Q9NWB7 429 aa7.02□□□□□ -1.29
UBR3-204ENST00000430321 MAST3O60307 1309 aa7.02□□□□□ -1.29
UBR3-204ENST00000430321 TPRNQ4KMQ1 711 aa7.02□□□□□ -1.29
UBR3-204ENST00000430321 FILIP1LQ4L180 1135 aa7.02□□□□□ -1.29
UBR3-204ENST00000430321 CCDC150Q8NCX0 1101 aa7.02□□□□□ -1.29
UBR3-204ENST00000430321 OFD1O75665 1012 aa7.01□□□□□ -1.29
UBR3-204ENST00000430321 ANKRD2Q9GZV1 360 aa7.01□□□□□ -1.29
UBR3-204ENST00000430321 KCNA6P17658 529 aa7.01□□□□□ -1.29
UBR3-204ENST00000430321 STXBP4Q6ZWJ1 553 aa7.01□□□□□ -1.29
UBR3-204ENST00000430321 SMARCE1Q969G3 411 aa7.01□□□□□ -1.29
UBR3-204ENST00000430321 LRRC27Q9C0I9 530 aa7.01□□□□□ -1.29
UBR3-204ENST00000430321 LRP2BPQ9P2M1 347 aa7.01□□□□□ -1.29
UBR3-204ENST00000430321 USP5P45974 858 aa7.01□□□□□ -1.29
UBR3-204ENST00000430321 RPAP2Q8IXW5 612 aaPredicted RBP7.01□□□□□ -1.29
UBR3-204ENST00000430321 OGFOD1Q8N543 542 aa7.01□□□□□ -1.29
UBR3-204ENST00000430321 CCDC87Q9NVE4 849 aa7.01□□□□□ -1.29
UBR3-204ENST00000430321 SURF6O75683 361 aaKnown RBP7.01□□□□□ -1.29
UBR3-204ENST00000430321 FAM161AQ3B820 660 aa7.01□□□□□ -1.29
UBR3-204ENST00000430321 ZNF804AQ7Z570 1209 aa7.01□□□□□ -1.29
UBR3-204ENST00000430321 RBM17Q96I25 401 aaKnown RBP7.01□□□□□ -1.29
UBR3-204ENST00000430321 ZSCAN31Q96LW9 406 aaPredicted RBP7.01□□□□□ -1.29
UBR3-204ENST00000430321 ACBD3Q9H3P7 528 aa7.01□□□□□ -1.29
UBR3-204ENST00000430321 UNC13AQ9UPW8 1703 aa7.01□□□□□ -1.29
UBR3-204ENST00000430321 POLR3DP05423 398 aaPredicted RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms