RNA–Protein interactions for RNA: ENST00000430317.2

COL6A4P2-201, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

TSL 3

Gene COL6A4P2, Length 568 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-201ENST00000430317 ADAMTS8Q9UP79 889 aa11.82□□□□□ -0.52
COL6A4P2-201ENST00000430317 CCDC9Q9Y3X0 531 aaKnown RBP11.82□□□□□ -0.52
COL6A4P2-201ENST00000430317 SPATA31A1Q5TZJ5 1347 aa11.82□□□□□ -0.52
COL6A4P2-201ENST00000430317 SPATA31A5Q5VU36 1347 aa11.82□□□□□ -0.52
COL6A4P2-201ENST00000430317 SPATA31A7Q8IWB4 1347 aa11.82□□□□□ -0.52
COL6A4P2-201ENST00000430317 ATRNO75882 1429 aa11.81□□□□□ -0.52
COL6A4P2-201ENST00000430317 TATP17735 454 aaPredicted RBP11.81□□□□□ -0.52
COL6A4P2-201ENST00000430317 PRKAR2BP31323 418 aa11.81□□□□□ -0.52
COL6A4P2-201ENST00000430317 AMOTQ4VCS5 1084 aa11.81□□□□□ -0.52
COL6A4P2-201ENST00000430317 RUNDC1Q96C34 613 aa11.81□□□□□ -0.52
COL6A4P2-201ENST00000430317 RSPH6AQ9H0K4 717 aa11.81□□□□□ -0.52
COL6A4P2-201ENST00000430317 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.81□□□□□ -0.52
COL6A4P2-201ENST00000430317 RGPD2P0DJD1 1756 aa11.81□□□□□ -0.52
COL6A4P2-201ENST00000430317 OVOS2A0A0G2JMS6 1433 aa11.8□□□□□ -0.52
COL6A4P2-201ENST00000430317 HMOX1P09601 288 aa11.8□□□□□ -0.52
COL6A4P2-201ENST00000430317 IL2RBP14784 551 aa11.8□□□□□ -0.52
COL6A4P2-201ENST00000430317 NCBP3Q53F19 620 aaKnown RBP11.8□□□□□ -0.52
COL6A4P2-201ENST00000430317 BARGINQ6ZT62 677 aa11.8□□□□□ -0.52
COL6A4P2-201ENST00000430317 ILDR1Q86SU0 546 aaPredicted RBP11.8□□□□□ -0.52
COL6A4P2-201ENST00000430317 GAS2L2Q8NHY3 880 aa11.8□□□□□ -0.52
COL6A4P2-201ENST00000430317 ZNF219Q9P2Y4 722 aaPredicted RBP11.8□□□□□ -0.52
COL6A4P2-201ENST00000430317 PLEKHO1Q53GL0 409 aaPredicted RBP11.79□□□□□ -0.52
COL6A4P2-201ENST00000430317 SPG7Q9UQ90 795 aa11.79□□□□□ -0.52
COL6A4P2-201ENST00000430317 PKD1L3Q7Z443 1732 aa11.79□□□□□ -0.52
COL6A4P2-201ENST00000430317 DISP2A7MBM2 1401 aa11.78□□□□□ -0.52
COL6A4P2-201ENST00000430317 TNS2Q63HR2 1409 aa11.78□□□□□ -0.52
COL6A4P2-201ENST00000430317 MEGF6O75095 1541 aa11.78□□□□□ -0.52
COL6A4P2-201ENST00000430317 LMOD3Q0VAK6 560 aa11.78□□□□□ -0.52
COL6A4P2-201ENST00000430317 AEBP1Q8IUX7 1158 aa11.78□□□□□ -0.52
COL6A4P2-201ENST00000430317 USHBP1Q8N6Y0 703 aa11.78□□□□□ -0.52
COL6A4P2-201ENST00000430317 GJD4Q96KN9 370 aaPredicted RBP11.78□□□□□ -0.52
COL6A4P2-201ENST00000430317 USP35Q9P2H5 1018 aa11.78□□□□□ -0.52
COL6A4P2-201ENST00000430317 PCDH11XQ9BZA7 1347 aa11.78□□□□□ -0.52
COL6A4P2-201ENST00000430317 PCDH11YQ9BZA8 1340 aa11.78□□□□□ -0.52
COL6A4P2-201ENST00000430317 PLEKHF1Q96S99 279 aa11.77□□□□□ -0.53
COL6A4P2-201ENST00000430317 GLI3P10071 1580 aa11.76□□□□□ -0.53
COL6A4P2-201ENST00000430317 THSD7AQ9UPZ6 1657 aa11.76□□□□□ -0.53
COL6A4P2-201ENST00000430317 C1orf141Q5JVX7 400 aa11.76□□□□□ -0.53
COL6A4P2-201ENST00000430317 QTRT2Q9H974 415 aaKnown RBP11.76□□□□□ -0.53
COL6A4P2-201ENST00000430317 LRRC37A3O60309 1634 aa11.75□□□□□ -0.53
COL6A4P2-201ENST00000430317 HSP90AB1P08238 724 aaKnown RBP11.75□□□□□ -0.53
COL6A4P2-201ENST00000430317 RBM6P78332 1123 aaKnown RBP11.75□□□□□ -0.53
COL6A4P2-201ENST00000430317 NFE2L2Q16236 605 aa11.75□□□□□ -0.53
COL6A4P2-201ENST00000430317 A0A0G2JS52 829 aa11.74□□□□□ -0.53
COL6A4P2-201ENST00000430317 HTATSF1O43719 755 aaKnown RBP11.74□□□□□ -0.53
COL6A4P2-201ENST00000430317 MYT1Q01538 1121 aa11.74□□□□□ -0.53
COL6A4P2-201ENST00000430317 CALD1Q05682 793 aaKnown RBP11.74□□□□□ -0.53
COL6A4P2-201ENST00000430317 DDB1Q16531 1140 aa11.74□□□□□ -0.53
COL6A4P2-201ENST00000430317 CCDC146Q8IYE0 955 aa11.74□□□□□ -0.53
COL6A4P2-201ENST00000430317 ZCRB1Q8TBF4 217 aaKnown RBP11.74□□□□□ -0.53
COL6A4P2-201ENST00000430317 RTF1Q92541 710 aaKnown RBP11.74□□□□□ -0.53
COL6A4P2-201ENST00000430317 MAP3K5Q99683 1374 aa11.74□□□□□ -0.53
COL6A4P2-201ENST00000430317 EXOC5O00471 708 aa11.73□□□□□ -0.53
COL6A4P2-201ENST00000430317 APAF1O14727 1248 aa11.73□□□□□ -0.53
COL6A4P2-201ENST00000430317 CCDC27Q2M243 656 aa11.73□□□□□ -0.53
COL6A4P2-201ENST00000430317 AKAP4Q5JQC9 854 aa11.73□□□□□ -0.53
COL6A4P2-201ENST00000430317 ZNF530Q6P9A1 599 aaPredicted RBP11.73□□□□□ -0.53
COL6A4P2-201ENST00000430317 IFNL2Q8IZJ0 200 aa11.73□□□□□ -0.53
COL6A4P2-201ENST00000430317 GNAT3A8MTJ3 354 aa11.72□□□□□ -0.53
COL6A4P2-201ENST00000430317 ONECUT3O60422 494 aaPredicted RBP11.72□□□□□ -0.53
COL6A4P2-201ENST00000430317 RXRBP28702 533 aa11.72□□□□□ -0.53
COL6A4P2-201ENST00000430317 TMPOP42166 694 aaKnown RBP11.72□□□□□ -0.53
COL6A4P2-201ENST00000430317 HNRNPUQ00839 825 aaKnown RBP eCLIP11.72□□□□□ -0.53
COL6A4P2-201ENST00000430317 FAM98CQ17RN3 349 aaKnown RBP11.72□□□□□ -0.53
COL6A4P2-201ENST00000430317 ZBED9Q6R2W3 1325 aa11.71□□□□□ -0.53
COL6A4P2-201ENST00000430317 NPM3O75607 178 aaKnown RBP11.71□□□□□ -0.53
COL6A4P2-201ENST00000430317 RIPK4P57078 832 aa11.71□□□□□ -0.53
COL6A4P2-201ENST00000430317 MTHFSDQ2M296 383 aaKnown RBP11.71□□□□□ -0.53
COL6A4P2-201ENST00000430317 PHACTR3Q96KR7 559 aa11.71□□□□□ -0.53
COL6A4P2-201ENST00000430317 SHANK3Q9BYB0 1731 aa11.71□□□□□ -0.54
COL6A4P2-201ENST00000430317 PHKG2P15735 406 aa11.7□□□□□ -0.54
COL6A4P2-201ENST00000430317 PDE3BQ13370 1112 aa11.7□□□□□ -0.54
COL6A4P2-201ENST00000430317 DCAF5Q96JK2 942 aa11.7□□□□□ -0.54
COL6A4P2-201ENST00000430317 DLG5Q8TDM6 1919 aa11.7□□□□□ -0.54
COL6A4P2-201ENST00000430317 ADAMTS7Q9UKP4 1686 aa11.69□□□□□ -0.54
COL6A4P2-201ENST00000430317 BCL9O00512 1426 aa11.69□□□□□ -0.54
COL6A4P2-201ENST00000430317 NEUROD2Q15784 382 aa11.68□□□□□ -0.54
COL6A4P2-201ENST00000430317 SEPT12Q8IYM1 358 aa11.68□□□□□ -0.54
COL6A4P2-201ENST00000430317 MRC1P22897 1456 aa11.68□□□□□ -0.54
COL6A4P2-201ENST00000430317 SCN11AQ9UI33 1791 aa11.67□□□□□ -0.54
COL6A4P2-201ENST00000430317 IL16Q14005 1332 aa11.67□□□□□ -0.54
COL6A4P2-201ENST00000430317 CYP27B1O15528 508 aa11.67□□□□□ -0.54
COL6A4P2-201ENST00000430317 NKX1-1Q15270 411 aaPredicted RBP11.67□□□□□ -0.54
COL6A4P2-201ENST00000430317 WDR63Q8IWG1 891 aa11.67□□□□□ -0.54
COL6A4P2-201ENST00000430317 DDX54Q8TDD1 881 aaKnown RBP11.67□□□□□ -0.54
COL6A4P2-201ENST00000430317 RRP7AQ9Y3A4 280 aaKnown RBP11.67□□□□□ -0.54
COL6A4P2-201ENST00000430317 CEMIPQ8WUJ3 1361 aa11.67□□□□□ -0.54
COL6A4P2-201ENST00000430317 TEFQ10587 303 aa11.66□□□□□ -0.54
COL6A4P2-201ENST00000430317 WWC1Q8IX03 1113 aa11.66□□□□□ -0.54
COL6A4P2-201ENST00000430317 BABAM1Q9NWV8 329 aa11.66□□□□□ -0.54
COL6A4P2-201ENST00000430317 RGS17Q9UGC6 210 aaPredicted RBP11.66□□□□□ -0.54
COL6A4P2-201ENST00000430317 RGS12O14924 1447 aa11.66□□□□□ -0.54
COL6A4P2-201ENST00000430317 ERVV-2B6SEH9 535 aa11.65□□□□□ -0.54
COL6A4P2-201ENST00000430317 HAX1O00165 279 aa11.65□□□□□ -0.54
COL6A4P2-201ENST00000430317 KRT27Q7Z3Y8 459 aa11.65□□□□□ -0.54
COL6A4P2-201ENST00000430317 KDM6AO15550 1401 aaPredicted RBP11.65□□□□□ -0.54
COL6A4P2-201ENST00000430317 VIRMAQ69YN4 1812 aaKnown RBP11.65□□□□□ -0.55
COL6A4P2-201ENST00000430317 ZNF521Q96K83 1311 aa11.64□□□□□ -0.55
COL6A4P2-201ENST00000430317 DOT1LQ8TEK3 1739 aa11.64□□□□□ -0.55
COL6A4P2-201ENST00000430317 RNMTO43148 476 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms