RNA–Protein interactions for RNA: ENST00000430293.1

POLR1B-206, Transcript of RNA polymerase I subunit B, humanhuman

TSL 4

Gene POLR1B, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-206ENST00000430293 INSRP06213 1382 aa17.18■□□□□ 0.34
POLR1B-206ENST00000430293 FLT4P35916 1363 aa17.18■□□□□ 0.34
POLR1B-206ENST00000430293 KIF24Q5T7B8 1368 aa17.18■□□□□ 0.34
POLR1B-206ENST00000430293 ZBTB7AO95365 584 aa17.17■□□□□ 0.34
POLR1B-206ENST00000430293 NCAPD2Q15021 1401 aa17.17■□□□□ 0.34
POLR1B-206ENST00000430293 SGIP1Q9BQI5 828 aa17.17■□□□□ 0.34
POLR1B-206ENST00000430293 HSP90AB2PQ58FF8 381 aa17.16■□□□□ 0.34
POLR1B-206ENST00000430293 NBPF6Q5VWK0 638 aa17.16■□□□□ 0.34
POLR1B-206ENST00000430293 NBPF4Q96M43 638 aa17.16■□□□□ 0.34
POLR1B-206ENST00000430293 EMILIN1Q9Y6C2 1016 aa17.15■□□□□ 0.34
POLR1B-206ENST00000430293 MAP2P11137 1827 aaKnown RBP17.14■□□□□ 0.34
POLR1B-206ENST00000430293 USHBP1Q8N6Y0 703 aa17.14■□□□□ 0.33
POLR1B-206ENST00000430293 ACSBG1Q96GR2 724 aa17.14■□□□□ 0.33
POLR1B-206ENST00000430293 SYT17Q9BSW7 474 aa17.14■□□□□ 0.33
POLR1B-206ENST00000430293 FHDC1Q9C0D6 1143 aaPredicted RBP17.14■□□□□ 0.33
POLR1B-206ENST00000430293 SMG6Q86US8 1419 aaKnown RBP17.13■□□□□ 0.33
POLR1B-206ENST00000430293 PKD1L3Q7Z443 1732 aa17.13■□□□□ 0.33
POLR1B-206ENST00000430293 ATF5Q9Y2D1 282 aaPredicted RBP17.13■□□□□ 0.33
POLR1B-206ENST00000430293 CGNL1Q0VF96 1302 aa17.13■□□□□ 0.33
POLR1B-206ENST00000430293 NSD2O96028 1365 aa17.13■□□□□ 0.33
POLR1B-206ENST00000430293 COL24A1Q17RW2 1714 aa17.13■□□□□ 0.33
POLR1B-206ENST00000430293 C1QTNF8P60827 252 aa17.12■□□□□ 0.33
POLR1B-206ENST00000430293 POLR3GLQ9BT43 218 aa17.11■□□□□ 0.33
POLR1B-206ENST00000430293 TOGARAM1Q9Y4F4 1720 aa17.1■□□□□ 0.33
POLR1B-206ENST00000430293 SENP3-EIF4A1A0A087X0R7 540 aa17.1■□□□□ 0.33
POLR1B-206ENST00000430293 SLC15A2Q16348 729 aa17.1■□□□□ 0.33
POLR1B-206ENST00000430293 TXNRD1Q16881 649 aa17.1■□□□□ 0.33
POLR1B-206ENST00000430293 MAP3K5Q99683 1374 aa17.1■□□□□ 0.33
POLR1B-206ENST00000430293 PANK3Q9H999 370 aa17.09■□□□□ 0.33
POLR1B-206ENST00000430293 LY75O60449 1722 aa17.09■□□□□ 0.33
POLR1B-206ENST00000430293 WASHC2AQ641Q2 1341 aa17.08■□□□□ 0.32
POLR1B-206ENST00000430293 DDX54Q8TDD1 881 aaKnown RBP17.08■□□□□ 0.32
POLR1B-206ENST00000430293 MTFR1LQ9H019 292 aa17.08■□□□□ 0.32
POLR1B-206ENST00000430293 POLKQ9UBT6 870 aa17.08■□□□□ 0.32
POLR1B-206ENST00000430293 QSER1Q2KHR3 1735 aa17.07■□□□□ 0.32
POLR1B-206ENST00000430293 KIF7Q2M1P5 1343 aa17.07■□□□□ 0.32
POLR1B-206ENST00000430293 IFFO2Q5TF58 517 aa17.07■□□□□ 0.32
POLR1B-206ENST00000430293 ZCRB1Q8TBF4 217 aaKnown RBP17.07■□□□□ 0.32
POLR1B-206ENST00000430293 STK32BQ9NY57 414 aa17.05■□□□□ 0.32
POLR1B-206ENST00000430293 TUBGCP6Q96RT7 1819 aa17.05■□□□□ 0.32
POLR1B-206ENST00000430293 LRRC4BQ9NT99 713 aa17.04■□□□□ 0.32
POLR1B-206ENST00000430293 PPM1GO15355 546 aaPredicted RBP17.03■□□□□ 0.32
POLR1B-206ENST00000430293 RAPGEF4Q8WZA2 1011 aa17.03■□□□□ 0.32
POLR1B-206ENST00000430293 KAT6BQ8WYB5 2073 aa17.03■□□□□ 0.32
POLR1B-206ENST00000430293 CYP27B1O15528 508 aa17.02■□□□□ 0.32
POLR1B-206ENST00000430293 TATP17735 454 aaPredicted RBP17.02■□□□□ 0.32
POLR1B-206ENST00000430293 TNNT2P45379 298 aaPredicted RBP17.02■□□□□ 0.32
POLR1B-206ENST00000430293 PRIM1P49642 420 aaKnown RBP17.02■□□□□ 0.32
POLR1B-206ENST00000430293 EYA1Q99502 592 aa17.02■□□□□ 0.32
POLR1B-206ENST00000430293 PCDH11XQ9BZA7 1347 aa17.01■□□□□ 0.31
POLR1B-206ENST00000430293 PCDH11YQ9BZA8 1340 aa17.01■□□□□ 0.31
POLR1B-206ENST00000430293 ITGB4P16144 1822 aa17.01■□□□□ 0.31
POLR1B-206ENST00000430293 EIF4A2Q14240 407 aaKnown RBP17.01■□□□□ 0.31
POLR1B-206ENST00000430293 ZNF827Q17R98 1081 aa17.01■□□□□ 0.31
POLR1B-206ENST00000430293 ARXQ96QS3 562 aa17.01■□□□□ 0.31
POLR1B-206ENST00000430293 AMER1Q5JTC6 1135 aaPredicted RBP17■□□□□ 0.31
POLR1B-206ENST00000430293 IGSF1Q8N6C5 1336 aa16.99■□□□□ 0.31
POLR1B-206ENST00000430293 AKT1S1Q96B36 256 aa16.98■□□□□ 0.31
POLR1B-206ENST00000430293 SYTL4Q96C24 671 aaPredicted RBP16.98■□□□□ 0.31
POLR1B-206ENST00000430293 KCNQ4P56696 695 aa16.97■□□□□ 0.31
POLR1B-206ENST00000430293 C5P01031 1676 aa16.97■□□□□ 0.31
POLR1B-206ENST00000430293 PER1O15534 1290 aaPredicted RBP16.96■□□□□ 0.31
POLR1B-206ENST00000430293 SLC27A3Q5K4L6 730 aa16.96■□□□□ 0.31
POLR1B-206ENST00000430293 PLEKHG2Q9H7P9 1386 aa16.96■□□□□ 0.31
POLR1B-206ENST00000430293 TAF1LQ8IZX4 1826 aa16.96■□□□□ 0.3
POLR1B-206ENST00000430293 NKX1-1Q15270 411 aaPredicted RBP16.95■□□□□ 0.3
POLR1B-206ENST00000430293 GIGYF1O75420 1035 aaPredicted RBP16.94■□□□□ 0.3
POLR1B-206ENST00000430293 MORC1Q86VD1 984 aa16.94■□□□□ 0.3
POLR1B-206ENST00000430293 KNSTRNQ9Y448 316 aa16.94■□□□□ 0.3
POLR1B-206ENST00000430293 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.93■□□□□ 0.34e-7■■□□□ 13.3
POLR1B-206ENST00000430293 PNPLA7Q6ZV29 1317 aa16.93■□□□□ 0.3
POLR1B-206ENST00000430293 GPR162Q16538 588 aa16.92■□□□□ 0.3
POLR1B-206ENST00000430293 KDRP35968 1356 aa16.91■□□□□ 0.3
POLR1B-206ENST00000430293 PALLDQ8WX93 1383 aa16.91■□□□□ 0.3
POLR1B-206ENST00000430293 PHKG2P15735 406 aa16.91■□□□□ 0.3
POLR1B-206ENST00000430293 CCNL1Q9UK58 526 aaPredicted RBP16.91■□□□□ 0.3
POLR1B-206ENST00000430293 SPG7Q9UQ90 795 aa16.91■□□□□ 0.3
POLR1B-206ENST00000430293 AEBP1Q8IUX7 1158 aa16.9■□□□□ 0.3
POLR1B-206ENST00000430293 COL3A1P02461 1466 aaPredicted RBP16.9■□□□□ 0.3
POLR1B-206ENST00000430293 C4BP0C0L5 1744 aa16.9■□□□□ 0.3
POLR1B-206ENST00000430293 KDM6AO15550 1401 aaPredicted RBP16.89■□□□□ 0.29
POLR1B-206ENST00000430293 IL13P35225 146 aa16.89■□□□□ 0.29
POLR1B-206ENST00000430293 MPRIPQ6WCQ1 1025 aa16.89■□□□□ 0.29
POLR1B-206ENST00000430293 NLGN2Q8NFZ4 835 aa16.89■□□□□ 0.29
POLR1B-206ENST00000430293 PIGBQ92521 554 aa16.89■□□□□ 0.29
POLR1B-206ENST00000430293 NPC1L1Q9UHC9 1359 aa16.89■□□□□ 0.29
POLR1B-206ENST00000430293 SLC16A10Q8TF71 515 aa16.88■□□□□ 0.29
POLR1B-206ENST00000430293 YBX3P16989 372 aaKnown RBP eCLIP16.87■□□□□ 0.294e-6■■□□□ 13.4
POLR1B-206ENST00000430293 IFNL2Q8IZJ0 200 aa16.87■□□□□ 0.29
POLR1B-206ENST00000430293 UBR3Q6ZT12 1888 aa16.86■□□□□ 0.29
POLR1B-206ENST00000430293 CC2D1BQ5T0F9 858 aaKnown RBP16.85■□□□□ 0.29
POLR1B-206ENST00000430293 ZNF831Q5JPB2 1677 aa16.85■□□□□ 0.29
POLR1B-206ENST00000430293 MTHFSP49914 203 aa16.84■□□□□ 0.29
POLR1B-206ENST00000430293 AMIGO3Q86WK7 504 aa16.84■□□□□ 0.29
POLR1B-206ENST00000430293 TFCP2L1Q9NZI6 479 aa16.84■□□□□ 0.29
POLR1B-206ENST00000430293 SULT6B1Q6IMI4 303 aa16.83■□□□□ 0.28
POLR1B-206ENST00000430293 SCN11AQ9UI33 1791 aa16.83■□□□□ 0.28
POLR1B-206ENST00000430293 ADAMTS7Q9UKP4 1686 aa16.83■□□□□ 0.28
POLR1B-206ENST00000430293 ASAP1Q9ULH1 1129 aa16.83■□□□□ 0.28
POLR1B-206ENST00000430293 COL5A3P25940 1745 aaPredicted RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms