RNA–Protein interactions for RNA: ENST00000430157.6

UBA52-201, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA52, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52-201ENST00000430157 MTFR1LQ9H019 292 aa13.3□□□□□ -0.28
UBA52-201ENST00000430157 KCNQ4P56696 695 aa13.29□□□□□ -0.28
UBA52-201ENST00000430157 SGIP1Q9BQI5 828 aa13.29□□□□□ -0.28
UBA52-201ENST00000430157 MEGF6O75095 1541 aa13.29□□□□□ -0.28
UBA52-201ENST00000430157 FHDC1Q9C0D6 1143 aaPredicted RBP13.28□□□□□ -0.28
UBA52-201ENST00000430157 RTL1A6NKG5 1358 aa13.28□□□□□ -0.28
UBA52-201ENST00000430157 PAPPAQ13219 1627 aa13.28□□□□□ -0.28
UBA52-201ENST00000430157 MYOM1P52179 1685 aa13.28□□□□□ -0.28
UBA52-201ENST00000430157 BTAF1O14981 1849 aa13.27□□□□□ -0.28
UBA52-201ENST00000430157 HSP90AB2PQ58FF8 381 aa13.27□□□□□ -0.29
UBA52-201ENST00000430157 AKT1S1Q96B36 256 aa13.27□□□□□ -0.29
UBA52-201ENST00000430157 SYT17Q9BSW7 474 aa13.27□□□□□ -0.29
UBA52-201ENST00000430157 FAM208AQ9UK61 1670 aaKnown RBP13.27□□□□□ -0.29
UBA52-201ENST00000430157 NSD2O96028 1365 aa13.26□□□□□ -0.29
UBA52-201ENST00000430157 CDCA8Q53HL2 280 aa13.26□□□□□ -0.29
UBA52-201ENST00000430157 SLC27A3Q5K4L6 730 aa13.26□□□□□ -0.29
UBA52-201ENST00000430157 CARD14Q9BXL6 1004 aa13.26□□□□□ -0.29
UBA52-201ENST00000430157 ARXQ96QS3 562 aa13.25□□□□□ -0.29
UBA52-201ENST00000430157 RAPGEF4Q8WZA2 1011 aa13.24□□□□□ -0.29
UBA52-201ENST00000430157 EMILIN1Q9Y6C2 1016 aa13.24□□□□□ -0.29
UBA52-201ENST00000430157 RGPD2P0DJD1 1756 aa13.24□□□□□ -0.29
UBA52-201ENST00000430157 SMG6Q86US8 1419 aaKnown RBP13.23□□□□□ -0.29
UBA52-201ENST00000430157 NSD3Q9BZ95 1437 aa13.23□□□□□ -0.29
UBA52-201ENST00000430157 INSRP06213 1382 aa13.23□□□□□ -0.29
UBA52-201ENST00000430157 PNPLA7Q6ZV29 1317 aa13.23□□□□□ -0.29
UBA52-201ENST00000430157 TATP17735 454 aaPredicted RBP13.23□□□□□ -0.29
UBA52-201ENST00000430157 TFCP2L1Q9NZI6 479 aa13.23□□□□□ -0.29
UBA52-201ENST00000430157 FLT4P35916 1363 aa13.22□□□□□ -0.29
UBA52-201ENST00000430157 CCNL1Q9UK58 526 aaPredicted RBP13.22□□□□□ -0.29
UBA52-201ENST00000430157 DOT1LQ8TEK3 1739 aa13.22□□□□□ -0.29
UBA52-201ENST00000430157 SHANK3Q9BYB0 1731 aa13.22□□□□□ -0.29
UBA52-201ENST00000430157 CGNL1Q0VF96 1302 aa13.21□□□□□ -0.29
UBA52-201ENST00000430157 PPM1GO15355 546 aaPredicted RBP13.21□□□□□ -0.29
UBA52-201ENST00000430157 POLR3GLQ9BT43 218 aa13.21□□□□□ -0.29
UBA52-201ENST00000430157 KLHL34Q8N239 644 aa13.2□□□□□ -0.3
UBA52-201ENST00000430157 SLC16A10Q8TF71 515 aa13.2□□□□□ -0.3
UBA52-201ENST00000430157 KIF24Q5T7B8 1368 aa13.2□□□□□ -0.3
UBA52-201ENST00000430157 PCDH11XQ9BZA7 1347 aa13.19□□□□□ -0.3
UBA52-201ENST00000430157 PCDH11YQ9BZA8 1340 aa13.19□□□□□ -0.3
UBA52-201ENST00000430157 KAT6BQ8WYB5 2073 aa13.19□□□□□ -0.3
UBA52-201ENST00000430157 KIF20BQ96Q89 1820 aa13.18□□□□□ -0.3
UBA52-201ENST00000430157 CYP27B1O15528 508 aa13.18□□□□□ -0.3
UBA52-201ENST00000430157 MSH5O43196 834 aa13.18□□□□□ -0.3
UBA52-201ENST00000430157 POLD1P28340 1107 aa13.18□□□□□ -0.3
UBA52-201ENST00000430157 MPRIPQ6WCQ1 1025 aa13.18□□□□□ -0.3
UBA52-201ENST00000430157 COL23A1Q86Y22 540 aaPredicted RBP13.17□□□□□ -0.3
UBA52-201ENST00000430157 MAP3K5Q99683 1374 aa13.17□□□□□ -0.3
UBA52-201ENST00000430157 WASHC2AQ641Q2 1341 aa13.16□□□□□ -0.3
UBA52-201ENST00000430157 EYA1Q99502 592 aa13.16□□□□□ -0.3
UBA52-201ENST00000430157 POLKQ9UBT6 870 aa13.16□□□□□ -0.3
UBA52-201ENST00000430157 PALLDQ8WX93 1383 aa13.16□□□□□ -0.3
UBA52-201ENST00000430157 LY75O60449 1722 aa13.16□□□□□ -0.3
UBA52-201ENST00000430157 TNNT2P45379 298 aaPredicted RBP13.15□□□□□ -0.3
UBA52-201ENST00000430157 GPR162Q16538 588 aa13.15□□□□□ -0.3
UBA52-201ENST00000430157 MSL1Q68DK7 614 aa13.15□□□□□ -0.3
UBA52-201ENST00000430157 ZNF784Q8NCA9 323 aaPredicted RBP13.15□□□□□ -0.3
UBA52-201ENST00000430157 NLGN2Q8NFZ4 835 aa13.15□□□□□ -0.3
UBA52-201ENST00000430157 PELP1Q8IZL8 1130 aaKnown RBP13.14□□□□□ -0.31
UBA52-201ENST00000430157 PIGBQ92521 554 aa13.14□□□□□ -0.31
UBA52-201ENST00000430157 NCAPD2Q15021 1401 aa13.13□□□□□ -0.31
UBA52-201ENST00000430157 QSER1Q2KHR3 1735 aa13.13□□□□□ -0.31
UBA52-201ENST00000430157 TUBGCP6Q96RT7 1819 aa13.13□□□□□ -0.31
UBA52-201ENST00000430157 HSPA5P11021 654 aaKnown RBP13.13□□□□□ -0.31
UBA52-201ENST00000430157 MIER1Q8N108 512 aa13.13□□□□□ -0.31
UBA52-201ENST00000430157 SPG7Q9UQ90 795 aa13.13□□□□□ -0.31
UBA52-201ENST00000430157 EIF4G2P78344 907 aaKnown RBP eCLIP13.12□□□□□ -0.31
UBA52-201ENST00000430157 EIF4A2Q14240 407 aaKnown RBP13.12□□□□□ -0.31
UBA52-201ENST00000430157 NKX1-1Q15270 411 aaPredicted RBP13.12□□□□□ -0.31
UBA52-201ENST00000430157 SMIM5Q71RC9 77 aa13.12□□□□□ -0.31
UBA52-201ENST00000430157 UTRNP46939 3433 aa13.11□□□□□ -0.31
UBA52-201ENST00000430157 AMIGO3Q86WK7 504 aa13.11□□□□□ -0.31
UBA52-201ENST00000430157 SMARCC1Q92922 1105 aaPredicted RBP13.11□□□□□ -0.31
UBA52-201ENST00000430157 PANK3Q9H999 370 aa13.11□□□□□ -0.31
UBA52-201ENST00000430157 TOGARAM1Q9Y4F4 1720 aa13.1□□□□□ -0.31
UBA52-201ENST00000430157 PHKG2P15735 406 aa13.1□□□□□ -0.31
UBA52-201ENST00000430157 PPP4R3CPQ6ZMV5 832 aa13.1□□□□□ -0.31
UBA52-201ENST00000430157 AK7Q96M32 723 aa13.1□□□□□ -0.31
UBA52-201ENST00000430157 COL24A1Q17RW2 1714 aa13.1□□□□□ -0.31
UBA52-201ENST00000430157 PHF14O94880 888 aa13.09□□□□□ -0.31
UBA52-201ENST00000430157 PKD1L3Q7Z443 1732 aa13.09□□□□□ -0.31
UBA52-201ENST00000430157 IFNL2Q8IZJ0 200 aa13.09□□□□□ -0.31
UBA52-201ENST00000430157 FLAD1Q8NFF5 587 aa13.09□□□□□ -0.31
UBA52-201ENST00000430157 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.09□□□□□ -0.31
UBA52-201ENST00000430157 TMOD3Q9NYL9 352 aa13.09□□□□□ -0.31
UBA52-201ENST00000430157 ASAP1Q9ULH1 1129 aa13.09□□□□□ -0.31
UBA52-201ENST00000430157 C5P01031 1676 aa13.08□□□□□ -0.31
UBA52-201ENST00000430157 ANKRD26Q9UPS8 1709 aa13.08□□□□□ -0.32
UBA52-201ENST00000430157 LOC102724428A0A0B4J2F2 783 aa13.08□□□□□ -0.32
UBA52-201ENST00000430157 YBX3P16989 372 aaKnown RBP eCLIP13.08□□□□□ -0.324e-54■■□□□ 13.2
UBA52-201ENST00000430157 SIK1P57059 783 aa13.08□□□□□ -0.32
UBA52-201ENST00000430157 LINC00116Q8NCU8 138 aa13.08□□□□□ -0.32
UBA52-201ENST00000430157 HMGB2P26583 209 aaKnown RBP13.07□□□□□ -0.32
UBA52-201ENST00000430157 C4BP0C0L5 1744 aa13.06□□□□□ -0.32
UBA52-201ENST00000430157 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.06□□□□□ -0.32
UBA52-201ENST00000430157 ITPK1Q13572 414 aa13.06□□□□□ -0.32
UBA52-201ENST00000430157 ATG3Q9NT62 314 aa13.06□□□□□ -0.32
UBA52-201ENST00000430157 IGSF1Q8N6C5 1336 aa13.06□□□□□ -0.32
UBA52-201ENST00000430157 MAP2P11137 1827 aaKnown RBP13.06□□□□□ -0.32
UBA52-201ENST00000430157 ITGB4P16144 1822 aa13.05□□□□□ -0.32
UBA52-201ENST00000430157 ATP6V1AP38606 617 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms