RNA–Protein interactions for RNA: ENST00000429958.5

SFTPA1-204, Transcript of surfactant protein A1, humanhuman

TSL 1 (best)

Gene SFTPA1, Length 527 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1-204ENST00000429958 KIF24Q5T7B8 1368 aa16.25■□□□□ 0.19
SFTPA1-204ENST00000429958 MEGF6O75095 1541 aa16.24■□□□□ 0.19
SFTPA1-204ENST00000429958 NSD2O96028 1365 aa16.23■□□□□ 0.19
SFTPA1-204ENST00000429958 FAM208AQ9UK61 1670 aaKnown RBP16.22■□□□□ 0.19
SFTPA1-204ENST00000429958 TATP17735 454 aaPredicted RBP16.22■□□□□ 0.19
SFTPA1-204ENST00000429958 RAPGEF4Q8WZA2 1011 aa16.22■□□□□ 0.19
SFTPA1-204ENST00000429958 SYTL4Q96C24 671 aaPredicted RBP16.22■□□□□ 0.19
SFTPA1-204ENST00000429958 SYT17Q9BSW7 474 aa16.22■□□□□ 0.19
SFTPA1-204ENST00000429958 EMILIN1Q9Y6C2 1016 aa16.22■□□□□ 0.19
SFTPA1-204ENST00000429958 KCNQ4P56696 695 aa16.21■□□□□ 0.19
SFTPA1-204ENST00000429958 FLT4P35916 1363 aa16.21■□□□□ 0.19
SFTPA1-204ENST00000429958 NSD3Q9BZ95 1437 aa16.2■□□□□ 0.18
SFTPA1-204ENST00000429958 DCAF8L1A6NGE4 600 aa16.2■□□□□ 0.18
SFTPA1-204ENST00000429958 SLC16A10Q8TF71 515 aa16.2■□□□□ 0.18
SFTPA1-204ENST00000429958 FHDC1Q9C0D6 1143 aaPredicted RBP16.2■□□□□ 0.18
SFTPA1-204ENST00000429958 PAPPAQ13219 1627 aa16.19■□□□□ 0.18
SFTPA1-204ENST00000429958 YY1P25490 414 aa16.19■□□□□ 0.18
SFTPA1-204ENST00000429958 ARXQ96QS3 562 aa16.19■□□□□ 0.18
SFTPA1-204ENST00000429958 BTAF1O14981 1849 aa16.19■□□□□ 0.18
SFTPA1-204ENST00000429958 SMG6Q86US8 1419 aaKnown RBP16.19■□□□□ 0.18
SFTPA1-204ENST00000429958 WASHC2AQ641Q2 1341 aa16.19■□□□□ 0.18
SFTPA1-204ENST00000429958 CYP27B1O15528 508 aa16.18■□□□□ 0.18
SFTPA1-204ENST00000429958 POLKQ9UBT6 870 aa16.18■□□□□ 0.18
SFTPA1-204ENST00000429958 PNPLA7Q6ZV29 1317 aa16.18■□□□□ 0.18
SFTPA1-204ENST00000429958 NKX1-1Q15270 411 aaPredicted RBP16.16■□□□□ 0.18
SFTPA1-204ENST00000429958 TFCP2L1Q9NZI6 479 aa16.16■□□□□ 0.18
SFTPA1-204ENST00000429958 CCNL1Q9UK58 526 aaPredicted RBP16.16■□□□□ 0.18
SFTPA1-204ENST00000429958 PCDH11XQ9BZA7 1347 aa16.16■□□□□ 0.18
SFTPA1-204ENST00000429958 PCDH11YQ9BZA8 1340 aa16.16■□□□□ 0.18
SFTPA1-204ENST00000429958 RGPD2P0DJD1 1756 aa16.15■□□□□ 0.18
SFTPA1-204ENST00000429958 PPM1GO15355 546 aaPredicted RBP16.15■□□□□ 0.18
SFTPA1-204ENST00000429958 HSPA5P11021 654 aaKnown RBP16.15■□□□□ 0.18
SFTPA1-204ENST00000429958 EIF4G2P78344 907 aaKnown RBP eCLIP16.15■□□□□ 0.18
SFTPA1-204ENST00000429958 EYA1Q99502 592 aa16.15■□□□□ 0.18
SFTPA1-204ENST00000429958 NCAPD2Q15021 1401 aa16.14■□□□□ 0.17
SFTPA1-204ENST00000429958 MAP3K5Q99683 1374 aa16.13■□□□□ 0.17
SFTPA1-204ENST00000429958 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.13■□□□□ 0.17
SFTPA1-204ENST00000429958 SHANK3Q9BYB0 1731 aa16.13■□□□□ 0.17
SFTPA1-204ENST00000429958 MYOM1P52179 1685 aa16.12■□□□□ 0.17
SFTPA1-204ENST00000429958 MPRIPQ6WCQ1 1025 aa16.12■□□□□ 0.17
SFTPA1-204ENST00000429958 COL23A1Q86Y22 540 aaPredicted RBP16.12■□□□□ 0.17
SFTPA1-204ENST00000429958 POLR3GLQ9BT43 218 aa16.12■□□□□ 0.17
SFTPA1-204ENST00000429958 PANK3Q9H999 370 aa16.12■□□□□ 0.17
SFTPA1-204ENST00000429958 PIGBQ92521 554 aa16.11■□□□□ 0.17
SFTPA1-204ENST00000429958 SPG7Q9UQ90 795 aa16.11■□□□□ 0.17
SFTPA1-204ENST00000429958 HMGB2P26583 209 aaKnown RBP16.1■□□□□ 0.17
SFTPA1-204ENST00000429958 POLD1P28340 1107 aa16.1■□□□□ 0.17
SFTPA1-204ENST00000429958 EIF4A2Q14240 407 aaKnown RBP16.1■□□□□ 0.17
SFTPA1-204ENST00000429958 TNNT2P45379 298 aaPredicted RBP16.09■□□□□ 0.17
SFTPA1-204ENST00000429958 CCER1Q8TC90 406 aaPredicted RBP16.09■□□□□ 0.17
SFTPA1-204ENST00000429958 SMARCC1Q92922 1105 aaPredicted RBP16.09■□□□□ 0.17
SFTPA1-204ENST00000429958 KIF20BQ96Q89 1820 aa16.09■□□□□ 0.17
SFTPA1-204ENST00000429958 KAT6BQ8WYB5 2073 aa16.08■□□□□ 0.16
SFTPA1-204ENST00000429958 PALLDQ8WX93 1383 aa16.08■□□□□ 0.16
SFTPA1-204ENST00000429958 LY75O60449 1722 aa16.08■□□□□ 0.16
SFTPA1-204ENST00000429958 DOT1LQ8TEK3 1739 aa16.08■□□□□ 0.16
SFTPA1-204ENST00000429958 PHKG2P15735 406 aa16.07■□□□□ 0.16
SFTPA1-204ENST00000429958 IFNL2Q8IZJ0 200 aa16.06■□□□□ 0.16
SFTPA1-204ENST00000429958 FLAD1Q8NFF5 587 aa16.06■□□□□ 0.16
SFTPA1-204ENST00000429958 IGSF1Q8N6C5 1336 aa16.04■□□□□ 0.16
SFTPA1-204ENST00000429958 MSH5O43196 834 aa16.04■□□□□ 0.16
SFTPA1-204ENST00000429958 AMIGO3Q86WK7 504 aa16.04■□□□□ 0.16
SFTPA1-204ENST00000429958 QSER1Q2KHR3 1735 aa16.04■□□□□ 0.16
SFTPA1-204ENST00000429958 COL24A1Q17RW2 1714 aa16.03■□□□□ 0.16
SFTPA1-204ENST00000429958 GPR162Q16538 588 aa16.03■□□□□ 0.16
SFTPA1-204ENST00000429958 ZNF784Q8NCA9 323 aaPredicted RBP16.03■□□□□ 0.16
SFTPA1-204ENST00000429958 NLGN2Q8NFZ4 835 aa16.03■□□□□ 0.16
SFTPA1-204ENST00000429958 ASAP1Q9ULH1 1129 aa16.03■□□□□ 0.16
SFTPA1-204ENST00000429958 ANKRD26Q9UPS8 1709 aa16.02■□□□□ 0.16
SFTPA1-204ENST00000429958 PLEKHG2Q9H7P9 1386 aa16.02■□□□□ 0.16
SFTPA1-204ENST00000429958 LOC102724428A0A0B4J2F2 783 aa16.02■□□□□ 0.16
SFTPA1-204ENST00000429958 SIK1P57059 783 aa16.02■□□□□ 0.16
SFTPA1-204ENST00000429958 MORC1Q86VD1 984 aa16.02■□□□□ 0.16
SFTPA1-204ENST00000429958 ATG3Q9NT62 314 aa16.02■□□□□ 0.16
SFTPA1-204ENST00000429958 TMOD3Q9NYL9 352 aa16.02■□□□□ 0.16
SFTPA1-204ENST00000429958 MSL1Q68DK7 614 aa16.01■□□□□ 0.15
SFTPA1-204ENST00000429958 SMIM5Q71RC9 77 aa16.01■□□□□ 0.15
SFTPA1-204ENST00000429958 KLHL34Q8N239 644 aa16.01■□□□□ 0.15
SFTPA1-204ENST00000429958 LINC00116Q8NCU8 138 aa16.01■□□□□ 0.15
SFTPA1-204ENST00000429958 PKD1L3Q7Z443 1732 aa16■□□□□ 0.15
SFTPA1-204ENST00000429958 ERVV-2B6SEH9 535 aa16■□□□□ 0.15
SFTPA1-204ENST00000429958 ITPK1Q13572 414 aa16■□□□□ 0.15
SFTPA1-204ENST00000429958 PLEKHO1Q53GL0 409 aaPredicted RBP16■□□□□ 0.15
SFTPA1-204ENST00000429958 KNSTRNQ9Y448 316 aa16■□□□□ 0.15
SFTPA1-204ENST00000429958 MAP2P11137 1827 aaKnown RBP16■□□□□ 0.15
SFTPA1-204ENST00000429958 AK7Q96M32 723 aa15.99■□□□□ 0.15
SFTPA1-204ENST00000429958 CD2APQ9Y5K6 639 aa15.99■□□□□ 0.15
SFTPA1-204ENST00000429958 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.98■□□□□ 0.15
SFTPA1-204ENST00000429958 SSFA2P28290 1259 aa15.98■□□□□ 0.15
SFTPA1-204ENST00000429958 ATP6V1AP38606 617 aa15.98■□□□□ 0.15
SFTPA1-204ENST00000429958 AMOTQ4VCS5 1084 aa15.98■□□□□ 0.15
SFTPA1-204ENST00000429958 AMER1Q5JTC6 1135 aaPredicted RBP15.98■□□□□ 0.15
SFTPA1-204ENST00000429958 DCAF5Q96JK2 942 aa15.98■□□□□ 0.15
SFTPA1-204ENST00000429958 SLC4A9Q96Q91 983 aa15.98■□□□□ 0.15
SFTPA1-204ENST00000429958 TOGARAM1Q9Y4F4 1720 aa15.98■□□□□ 0.15
SFTPA1-204ENST00000429958 TUBGCP6Q96RT7 1819 aa15.97■□□□□ 0.15
SFTPA1-204ENST00000429958 PER1O15534 1290 aaPredicted RBP15.97■□□□□ 0.15
SFTPA1-204ENST00000429958 HSP90AB1P08238 724 aaKnown RBP15.97■□□□□ 0.15
SFTPA1-204ENST00000429958 IL13P35225 146 aa15.97■□□□□ 0.15
SFTPA1-204ENST00000429958 YBX3P16989 372 aaKnown RBP eCLIP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms