RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 INTS6LQ5JSJ4 861 aaKnown RBP6.25□□□□□ -1.41
HMGB1P9-201ENST00000429856 MYSM1Q5VVJ2 828 aa6.25□□□□□ -1.41
HMGB1P9-201ENST00000429856 KRTAP4-12Q9BQ66 201 aa6.25□□□□□ -1.41
HMGB1P9-201ENST00000429856 GOPCQ9HD26 462 aa6.25□□□□□ -1.41
HMGB1P9-201ENST00000429856 IGF1RP08069 1367 aa6.24□□□□□ -1.41
HMGB1P9-201ENST00000429856 PTGIRP43119 386 aa6.24□□□□□ -1.41
HMGB1P9-201ENST00000429856 CLK2P49760 499 aaKnown RBP6.24□□□□□ -1.41
HMGB1P9-201ENST00000429856 PTK2Q05397 1052 aa6.24□□□□□ -1.41
HMGB1P9-201ENST00000429856 TRIM22Q8IYM9 498 aa6.24□□□□□ -1.41
HMGB1P9-201ENST00000429856 IL27Q8NEV9 243 aa6.24□□□□□ -1.41
HMGB1P9-201ENST00000429856 LRRC4BQ9NT99 713 aa6.24□□□□□ -1.41
HMGB1P9-201ENST00000429856 FKBPLQ9UIM3 349 aa6.24□□□□□ -1.41
HMGB1P9-201ENST00000429856 NSFL1CQ9UNZ2 370 aaKnown RBP6.24□□□□□ -1.41
HMGB1P9-201ENST00000429856 PROCP04070 461 aa6.23□□□□□ -1.41
HMGB1P9-201ENST00000429856 ADH1AP07327 375 aa6.23□□□□□ -1.41
HMGB1P9-201ENST00000429856 SKIV2LQ15477 1246 aaKnown RBP6.23□□□□□ -1.41
HMGB1P9-201ENST00000429856 NBPF20Q3BBV1 942 aa6.23□□□□□ -1.41
HMGB1P9-201ENST00000429856 CUEDC1Q9NWM3 386 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P9-201ENST00000429856 ZC3H4Q9UPT8 1303 aaKnown RBP6.23□□□□□ -1.41
HMGB1P9-201ENST00000429856 H7C1W4 665 aa6.22□□□□□ -1.41
HMGB1P9-201ENST00000429856 CTDSPL2Q05D32 466 aa6.22□□□□□ -1.41
HMGB1P9-201ENST00000429856 RIPOR1Q6ZS17 1223 aa6.22□□□□□ -1.41
HMGB1P9-201ENST00000429856 PRICKLE2Q7Z3G6 844 aa6.22□□□□□ -1.41
HMGB1P9-201ENST00000429856 TRERF1Q96PN7 1200 aa6.22□□□□□ -1.41
HMGB1P9-201ENST00000429856 GPSM3Q9Y4H4 160 aa6.22□□□□□ -1.41
HMGB1P9-201ENST00000429856 ITGB2P05107 769 aa6.21□□□□□ -1.42
HMGB1P9-201ENST00000429856 RNF144AP50876 292 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P9-201ENST00000429856 FOXD4L5Q5VV16 416 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P9-201ENST00000429856 ZNF837Q96EG3 531 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P9-201ENST00000429856 PCMTD1Q96MG8 357 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P9-201ENST00000429856 TMPRSS4Q9NRS4 437 aa6.21□□□□□ -1.42
HMGB1P9-201ENST00000429856 DBN1Q16643 649 aa6.2□□□□□ -1.42
HMGB1P9-201ENST00000429856 ALYREFQ86V81 257 aaKnown RBP6.2□□□□□ -1.42
HMGB1P9-201ENST00000429856 ZNF784Q8NCA9 323 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P9-201ENST00000429856 ACDQ96AP0 544 aa6.2□□□□□ -1.42
HMGB1P9-201ENST00000429856 POLR3EQ9NVU0 708 aa6.2□□□□□ -1.42
HMGB1P9-201ENST00000429856 GPR25O00155 361 aa6.19□□□□□ -1.42
HMGB1P9-201ENST00000429856 LILRA1O75019 489 aa6.19□□□□□ -1.42
HMGB1P9-201ENST00000429856 RHOQP17081 205 aa6.19□□□□□ -1.42
HMGB1P9-201ENST00000429856 MX2P20592 715 aa6.19□□□□□ -1.42
HMGB1P9-201ENST00000429856 ADD1P35611 737 aaKnown RBP6.19□□□□□ -1.42
HMGB1P9-201ENST00000429856 BAG6P46379 1132 aa6.19□□□□□ -1.42
HMGB1P9-201ENST00000429856 RAB15P59190 212 aa6.19□□□□□ -1.42
HMGB1P9-201ENST00000429856 Q8N3U1 123 aa6.19□□□□□ -1.42
HMGB1P9-201ENST00000429856 PNMA1Q8ND90 353 aa6.19□□□□□ -1.42
HMGB1P9-201ENST00000429856 ADAM32Q8TC27 787 aa6.19□□□□□ -1.42
HMGB1P9-201ENST00000429856 ATP1B4Q9UN42 357 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P9-201ENST00000429856 ERVH48-1M5A8F1 160 aa6.18□□□□□ -1.42
HMGB1P9-201ENST00000429856 TMEM132AQ24JP5 1023 aa6.18□□□□□ -1.42
HMGB1P9-201ENST00000429856 DZIP3Q86Y13 1208 aaKnown RBP6.18□□□□□ -1.42
HMGB1P9-201ENST00000429856 GTPBP3Q969Y2 492 aaKnown RBP6.18□□□□□ -1.42
HMGB1P9-201ENST00000429856 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.18□□□□□ -1.42
HMGB1P9-201ENST00000429856 DYRK1BQ9Y463 629 aa6.18□□□□□ -1.42
HMGB1P9-201ENST00000429856 OIP5O43482 229 aa6.17□□□□□ -1.42
HMGB1P9-201ENST00000429856 KDF1Q8NAX2 398 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P9-201ENST00000429856 GAS2L1Q99501 681 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P9-201ENST00000429856 MKL2Q9ULH7 1088 aa6.17□□□□□ -1.42
HMGB1P9-201ENST00000429856 GPC1P35052 558 aa6.16□□□□□ -1.42
HMGB1P9-201ENST00000429856 NR6A1Q15406 480 aa6.16□□□□□ -1.42
HMGB1P9-201ENST00000429856 PPP2R2DQ66LE6 453 aa6.16□□□□□ -1.42
HMGB1P9-201ENST00000429856 LRRN4Q8WUT4 740 aa6.16□□□□□ -1.42
HMGB1P9-201ENST00000429856 KRBA1A5PL33 1030 aa6.15□□□□□ -1.42
HMGB1P9-201ENST00000429856 FURINP09958 794 aa6.15□□□□□ -1.42
HMGB1P9-201ENST00000429856 MAP2K3P46734 347 aa6.15□□□□□ -1.42
HMGB1P9-201ENST00000429856 PROCA1Q8NCQ7 364 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P9-201ENST00000429856 ATP5J2-PTCD1G3V325 749 aa6.14□□□□□ -1.43
HMGB1P9-201ENST00000429856 MEN1O00255 615 aa6.14□□□□□ -1.43
HMGB1P9-201ENST00000429856 SLC27A3Q5K4L6 730 aa6.14□□□□□ -1.43
HMGB1P9-201ENST00000429856 SEPT12Q8IYM1 358 aa6.14□□□□□ -1.43
HMGB1P9-201ENST00000429856 NLRP3Q96P20 1036 aa6.14□□□□□ -1.43
HMGB1P9-201ENST00000429856 OCSTAMPQ9BR26 566 aa6.14□□□□□ -1.43
HMGB1P9-201ENST00000429856 OXCT2Q9BYC2 517 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P9-201ENST00000429856 RRAGCQ9HB90 399 aa6.14□□□□□ -1.43
HMGB1P9-201ENST00000429856 PIK3R2O00459 728 aa6.13□□□□□ -1.43
HMGB1P9-201ENST00000429856 SNRPNP63162 240 aaKnown RBP6.13□□□□□ -1.43
HMGB1P9-201ENST00000429856 POU4F2Q12837 409 aa6.13□□□□□ -1.43
HMGB1P9-201ENST00000429856 WDR44Q5JSH3 913 aa6.13□□□□□ -1.43
HMGB1P9-201ENST00000429856 CYLDQ9NQC7 956 aa6.13□□□□□ -1.43
HMGB1P9-201ENST00000429856 ESPNB1AK53 854 aa6.12□□□□□ -1.43
HMGB1P9-201ENST00000429856 TMEM259Q4ZIN3 620 aa6.12□□□□□ -1.43
HMGB1P9-201ENST00000429856 CCDC125Q86Z20 511 aa6.12□□□□□ -1.43
HMGB1P9-201ENST00000429856 CFHR5Q9BXR6 569 aa6.12□□□□□ -1.43
HMGB1P9-201ENST00000429856 NUCKS1Q9H1E3 243 aaKnown RBP6.12□□□□□ -1.43
HMGB1P9-201ENST00000429856 PHF24Q9UPV7 400 aa6.12□□□□□ -1.43
HMGB1P9-201ENST00000429856 A0A1W2PRU2 124 aa6.11□□□□□ -1.43
HMGB1P9-201ENST00000429856 F11P03951 625 aa6.11□□□□□ -1.43
HMGB1P9-201ENST00000429856 TIMMDC1Q9NPL8 285 aa6.11□□□□□ -1.43
HMGB1P9-201ENST00000429856 TIMELESSQ9UNS1 1208 aa6.11□□□□□ -1.43
HMGB1P9-201ENST00000429856 RFC5P40937 340 aa6.1□□□□□ -1.43
HMGB1P9-201ENST00000429856 NBPF10Q6P3W6 841 aaKnown RBP6.1□□□□□ -1.43
HMGB1P9-201ENST00000429856 NBPF15Q8N660 670 aa6.1□□□□□ -1.43
HMGB1P9-201ENST00000429856 GDF2Q9UK05 429 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P9-201ENST00000429856 EDARADDQ8WWZ3 215 aa6.09□□□□□ -1.43
HMGB1P9-201ENST00000429856 KLRG1Q96E93 195 aa6.09□□□□□ -1.43
HMGB1P9-201ENST00000429856 GRIP2Q9C0E4 1043 aa6.09□□□□□ -1.43
HMGB1P9-201ENST00000429856 ESF1Q9H501 851 aaKnown RBP6.09□□□□□ -1.43
HMGB1P9-201ENST00000429856 AP1G2O75843 785 aa6.08□□□□□ -1.44
HMGB1P9-201ENST00000429856 AMPD1P23109 780 aa6.08□□□□□ -1.44
HMGB1P9-201ENST00000429856 COL8A1P27658 744 aa6.08□□□□□ -1.44
HMGB1P9-201ENST00000429856 GRIN2CQ14957 1233 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms