RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 RRS1Q15050 365 aaKnown RBP20.77■□□□□ 0.92
MSH5-208ENST00000429846 FLT4P35916 1363 aa20.76■□□□□ 0.91
MSH5-208ENST00000429846 ZCRB1Q8TBF4 217 aaKnown RBP20.76■□□□□ 0.91
MSH5-208ENST00000429846 INSRP06213 1382 aa20.75■□□□□ 0.91
MSH5-208ENST00000429846 YY1P25490 414 aa20.75■□□□□ 0.91
MSH5-208ENST00000429846 ATF5Q9Y2D1 282 aaPredicted RBP20.75■□□□□ 0.91
MSH5-208ENST00000429846 SGIP1Q9BQI5 828 aa20.74■□□□□ 0.91
MSH5-208ENST00000429846 LRRC4BQ9NT99 713 aa20.74■□□□□ 0.91
MSH5-208ENST00000429846 ANKRD26Q9UPS8 1709 aa20.73■□□□□ 0.91
MSH5-208ENST00000429846 ZNF827Q17R98 1081 aa20.73■□□□□ 0.91
MSH5-208ENST00000429846 NBPF6Q5VWK0 638 aa20.73■□□□□ 0.91
MSH5-208ENST00000429846 SYTL4Q96C24 671 aaPredicted RBP20.73■□□□□ 0.91
MSH5-208ENST00000429846 NBPF4Q96M43 638 aa20.73■□□□□ 0.91
MSH5-208ENST00000429846 NSD2O96028 1365 aa20.72■□□□□ 0.91
MSH5-208ENST00000429846 NSD3Q9BZ95 1437 aa20.72■□□□□ 0.91
MSH5-208ENST00000429846 RAPGEF4Q8WZA2 1011 aa20.72■□□□□ 0.91
MSH5-208ENST00000429846 TUBGCP6Q96RT7 1819 aa20.71■□□□□ 0.91
MSH5-208ENST00000429846 COL24A1Q17RW2 1714 aa20.71■□□□□ 0.91
MSH5-208ENST00000429846 PRIM1P49642 420 aaKnown RBP20.71■□□□□ 0.91
MSH5-208ENST00000429846 AKT1S1Q96B36 256 aa20.71■□□□□ 0.91
MSH5-208ENST00000429846 MAP3K5Q99683 1374 aa20.71■□□□□ 0.91
MSH5-208ENST00000429846 SLC16A10Q8TF71 515 aa20.7■□□□□ 0.9
MSH5-208ENST00000429846 FHDC1Q9C0D6 1143 aaPredicted RBP20.7■□□□□ 0.9
MSH5-208ENST00000429846 TATP17735 454 aaPredicted RBP20.69■□□□□ 0.9
MSH5-208ENST00000429846 SYT17Q9BSW7 474 aa20.69■□□□□ 0.9
MSH5-208ENST00000429846 PCDH11XQ9BZA7 1347 aa20.69■□□□□ 0.9
MSH5-208ENST00000429846 PCDH11YQ9BZA8 1340 aa20.69■□□□□ 0.9
MSH5-208ENST00000429846 PKD1L3Q7Z443 1732 aa20.69■□□□□ 0.9
MSH5-208ENST00000429846 HSP90AB2PQ58FF8 381 aa20.68■□□□□ 0.9
MSH5-208ENST00000429846 USHBP1Q8N6Y0 703 aa20.68■□□□□ 0.9
MSH5-208ENST00000429846 ARXQ96QS3 562 aa20.68■□□□□ 0.9
MSH5-208ENST00000429846 CARD14Q9BXL6 1004 aa20.68■□□□□ 0.9
MSH5-208ENST00000429846 NCAPD2Q15021 1401 aa20.66■□□□□ 0.9
MSH5-208ENST00000429846 MAP2P11137 1827 aaKnown RBP20.65■□□□□ 0.9
MSH5-208ENST00000429846 PNPLA7Q6ZV29 1317 aa20.65■□□□□ 0.9
MSH5-208ENST00000429846 HMGB2P26583 209 aaKnown RBP20.65■□□□□ 0.9
MSH5-208ENST00000429846 TFCP2L1Q9NZI6 479 aa20.65■□□□□ 0.9
MSH5-208ENST00000429846 CCNL1Q9UK58 526 aaPredicted RBP20.65■□□□□ 0.9
MSH5-208ENST00000429846 C5P01031 1676 aa20.64■□□□□ 0.9
MSH5-208ENST00000429846 EMILIN1Q9Y6C2 1016 aa20.64■□□□□ 0.89
MSH5-208ENST00000429846 CHD4Q14839 1912 aa20.63■□□□□ 0.89
MSH5-208ENST00000429846 TOGARAM1Q9Y4F4 1720 aa20.62■□□□□ 0.89
MSH5-208ENST00000429846 POLD1P28340 1107 aa20.62■□□□□ 0.89
MSH5-208ENST00000429846 ITGB4P16144 1822 aa20.62■□□□□ 0.89
MSH5-208ENST00000429846 TAF1LQ8IZX4 1826 aa20.62■□□□□ 0.89
MSH5-208ENST00000429846 KCNQ4P56696 695 aa20.61■□□□□ 0.89
MSH5-208ENST00000429846 WASHC2AQ641Q2 1341 aa20.6■□□□□ 0.89
MSH5-208ENST00000429846 PCGF6Q9BYE7 350 aa20.59■□□□□ 0.89
MSH5-208ENST00000429846 PALLDQ8WX93 1383 aa20.59■□□□□ 0.89
MSH5-208ENST00000429846 PPM1GO15355 546 aaPredicted RBP20.58■□□□□ 0.89
MSH5-208ENST00000429846 CYP27B1O15528 508 aa20.58■□□□□ 0.89
MSH5-208ENST00000429846 PLEKHG2Q9H7P9 1386 aa20.58■□□□□ 0.88
MSH5-208ENST00000429846 SPG7Q9UQ90 795 aa20.56■□□□□ 0.88
MSH5-208ENST00000429846 EIF4G2P78344 907 aaKnown RBP eCLIP20.55■□□□□ 0.88
MSH5-208ENST00000429846 SMARCC1Q92922 1105 aaPredicted RBP20.55■□□□□ 0.88
MSH5-208ENST00000429846 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.55■□□□□ 0.883e-9■■□□□ 13
MSH5-208ENST00000429846 C4BP0C0L5 1744 aa20.54■□□□□ 0.88
MSH5-208ENST00000429846 NKX1-1Q15270 411 aaPredicted RBP20.54■□□□□ 0.88
MSH5-208ENST00000429846 MPRIPQ6WCQ1 1025 aa20.54■□□□□ 0.88
MSH5-208ENST00000429846 POLKQ9UBT6 870 aa20.54■□□□□ 0.88
MSH5-208ENST00000429846 FLAD1Q8NFF5 587 aa20.53■□□□□ 0.88
MSH5-208ENST00000429846 EYA1Q99502 592 aa20.53■□□□□ 0.88
MSH5-208ENST00000429846 COL23A1Q86Y22 540 aaPredicted RBP20.52■□□□□ 0.88
MSH5-208ENST00000429846 KLHL34Q8N239 644 aa20.52■□□□□ 0.88
MSH5-208ENST00000429846 POLR3GLQ9BT43 218 aa20.52■□□□□ 0.88
MSH5-208ENST00000429846 MSH5O43196 834 aa20.51■□□□□ 0.87
MSH5-208ENST00000429846 UBR3Q6ZT12 1888 aa20.5■□□□□ 0.87
MSH5-208ENST00000429846 GPR162Q16538 588 aa20.5■□□□□ 0.87
MSH5-208ENST00000429846 UTRNP46939 3433 aa20.49■□□□□ 0.87
MSH5-208ENST00000429846 HSPA5P11021 654 aaKnown RBP20.49■□□□□ 0.87
MSH5-208ENST00000429846 ZNF784Q8NCA9 323 aaPredicted RBP20.49■□□□□ 0.87
MSH5-208ENST00000429846 PIGBQ92521 554 aa20.49■□□□□ 0.87
MSH5-208ENST00000429846 EIF4A2Q14240 407 aaKnown RBP20.48■□□□□ 0.87
MSH5-208ENST00000429846 IFNL2Q8IZJ0 200 aa20.48■□□□□ 0.87
MSH5-208ENST00000429846 AK7Q96M32 723 aa20.47■□□□□ 0.87
MSH5-208ENST00000429846 TMOD3Q9NYL9 352 aa20.47■□□□□ 0.87
MSH5-208ENST00000429846 IGSF1Q8N6C5 1336 aa20.47■□□□□ 0.87
MSH5-208ENST00000429846 PHKG2P15735 406 aa20.46■□□□□ 0.87
MSH5-208ENST00000429846 TNNT2P45379 298 aaPredicted RBP20.46■□□□□ 0.87
MSH5-208ENST00000429846 NLGN2Q8NFZ4 835 aa20.45■□□□□ 0.86
MSH5-208ENST00000429846 PANK3Q9H999 370 aa20.45■□□□□ 0.86
MSH5-208ENST00000429846 LOC102724428A0A0B4J2F2 783 aa20.44■□□□□ 0.86
MSH5-208ENST00000429846 SIK1P57059 783 aa20.44■□□□□ 0.86
MSH5-208ENST00000429846 MSL1Q68DK7 614 aa20.44■□□□□ 0.86
MSH5-208ENST00000429846 CCER1Q8TC90 406 aaPredicted RBP20.44■□□□□ 0.86
MSH5-208ENST00000429846 ZNF831Q5JPB2 1677 aa20.44■□□□□ 0.86
MSH5-208ENST00000429846 SSFA2P28290 1259 aa20.42■□□□□ 0.86
MSH5-208ENST00000429846 HSP90AB1P08238 724 aaKnown RBP20.41■□□□□ 0.86
MSH5-208ENST00000429846 PELP1Q8IZL8 1130 aaKnown RBP20.41■□□□□ 0.86
MSH5-208ENST00000429846 CD2APQ9Y5K6 639 aa20.41■□□□□ 0.86
MSH5-208ENST00000429846 GRIN3BO60391 1043 aa20.4■□□□□ 0.86
MSH5-208ENST00000429846 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.39■□□□□ 0.85
MSH5-208ENST00000429846 ASAP1Q9ULH1 1129 aa20.39■□□□□ 0.85
MSH5-208ENST00000429846 KDRP35968 1356 aa20.38■□□□□ 0.85
MSH5-208ENST00000429846 ERVV-2B6SEH9 535 aa20.38■□□□□ 0.85
MSH5-208ENST00000429846 PHF14O94880 888 aa20.38■□□□□ 0.85
MSH5-208ENST00000429846 ATP6V1AP38606 617 aa20.38■□□□□ 0.85
MSH5-208ENST00000429846 AMOTQ4VCS5 1084 aa20.38■□□□□ 0.85
MSH5-208ENST00000429846 PLEKHO1Q53GL0 409 aaPredicted RBP20.38■□□□□ 0.85
MSH5-208ENST00000429846 MORC1Q86VD1 984 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms