RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.69□□□□□ -0.38
NEDD1-203ENST00000429527 ANKRD24Q8TF21 1146 aa12.68□□□□□ -0.38
NEDD1-203ENST00000429527 CAMKK2Q96RR4 588 aa12.68□□□□□ -0.38
NEDD1-203ENST00000429527 MEGF6O75095 1541 aa12.68□□□□□ -0.38
NEDD1-203ENST00000429527 PER1O15534 1290 aaPredicted RBP12.67□□□□□ -0.38
NEDD1-203ENST00000429527 ITGB4P16144 1822 aa12.67□□□□□ -0.38
NEDD1-203ENST00000429527 COL3A1P02461 1466 aaPredicted RBP12.67□□□□□ -0.38
NEDD1-203ENST00000429527 PLSCR1O15162 318 aa12.67□□□□□ -0.38
NEDD1-203ENST00000429527 STRN4Q9NRL3 753 aa12.67□□□□□ -0.38
NEDD1-203ENST00000429527 TOM1L2Q6ZVM7 507 aa12.66□□□□□ -0.38
NEDD1-203ENST00000429527 BCL11BQ9C0K0 894 aaPredicted RBP12.66□□□□□ -0.38
NEDD1-203ENST00000429527 CCDC9Q9Y3X0 531 aaKnown RBP12.65□□□□□ -0.38
NEDD1-203ENST00000429527 TAF1LQ8IZX4 1826 aa12.65□□□□□ -0.38
NEDD1-203ENST00000429527 IL2RBP14784 551 aa12.65□□□□□ -0.38
NEDD1-203ENST00000429527 BAG6P46379 1132 aa12.65□□□□□ -0.38
NEDD1-203ENST00000429527 MS4A1P11836 297 aa12.64□□□□□ -0.39
NEDD1-203ENST00000429527 MARCH10Q8NA82 808 aaPredicted RBP12.64□□□□□ -0.39
NEDD1-203ENST00000429527 TUBGCP6Q96RT7 1819 aa12.64□□□□□ -0.39
NEDD1-203ENST00000429527 DDB1Q16531 1140 aa12.64□□□□□ -0.39
NEDD1-203ENST00000429527 AMER1Q5JTC6 1135 aaPredicted RBP12.64□□□□□ -0.39
NEDD1-203ENST00000429527 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.64□□□□□ -0.391e-9■■■■□ 20.2
NEDD1-203ENST00000429527 C5P01031 1676 aa12.63□□□□□ -0.39
NEDD1-203ENST00000429527 KDRP35968 1356 aa12.63□□□□□ -0.39
NEDD1-203ENST00000429527 SCN11AQ9UI33 1791 aa12.63□□□□□ -0.39
NEDD1-203ENST00000429527 MRC1P22897 1456 aa12.62□□□□□ -0.39
NEDD1-203ENST00000429527 NKX1-1Q15270 411 aaPredicted RBP12.62□□□□□ -0.39
NEDD1-203ENST00000429527 IGSF1Q8N6C5 1336 aa12.61□□□□□ -0.39
NEDD1-203ENST00000429527 GGNBP2Q9H3C7 697 aa12.61□□□□□ -0.39
NEDD1-203ENST00000429527 PANK3Q9H999 370 aa12.61□□□□□ -0.39
NEDD1-203ENST00000429527 POLKQ9UBT6 870 aa12.61□□□□□ -0.39
NEDD1-203ENST00000429527 SIPA1L3O60292 1781 aaPredicted RBP12.61□□□□□ -0.39
NEDD1-203ENST00000429527 SF3B2Q13435 895 aaKnown RBP12.61□□□□□ -0.39
NEDD1-203ENST00000429527 COL5A3P25940 1745 aaPredicted RBP12.6□□□□□ -0.39
NEDD1-203ENST00000429527 EXOC5O00471 708 aa12.6□□□□□ -0.39
NEDD1-203ENST00000429527 FAM9BQ8IZU0 186 aa12.6□□□□□ -0.39
NEDD1-203ENST00000429527 RRP1P56182 461 aaKnown RBP12.6□□□□□ -0.39
NEDD1-203ENST00000429527 NOP58Q9Y2X3 529 aaKnown RBP12.59□□□□□ -0.39
NEDD1-203ENST00000429527 TCERG1O14776 1098 aaKnown RBP12.58□□□□□ -0.39
NEDD1-203ENST00000429527 IPO9Q96P70 1041 aaKnown RBP12.58□□□□□ -0.39
NEDD1-203ENST00000429527 ZNF521Q96K83 1311 aa12.58□□□□□ -0.4
NEDD1-203ENST00000429527 UBR2Q8IWV8 1755 aa12.58□□□□□ -0.4
NEDD1-203ENST00000429527 HMGB2P26583 209 aaKnown RBP12.58□□□□□ -0.4
NEDD1-203ENST00000429527 AMPHP49418 695 aa12.58□□□□□ -0.4
NEDD1-203ENST00000429527 B4GALNT3Q6L9W6 998 aa12.58□□□□□ -0.4
NEDD1-203ENST00000429527 NBPF6Q5VWK0 638 aa12.57□□□□□ -0.4
NEDD1-203ENST00000429527 NBPF4Q96M43 638 aa12.57□□□□□ -0.4
NEDD1-203ENST00000429527 CSB-PGBD3P0DP91 1061 aa12.56□□□□□ -0.4
NEDD1-203ENST00000429527 PCDH11XQ9BZA7 1347 aa12.56□□□□□ -0.4
NEDD1-203ENST00000429527 PCDH11YQ9BZA8 1340 aa12.56□□□□□ -0.4
NEDD1-203ENST00000429527 RRS1Q15050 365 aaKnown RBP12.55□□□□□ -0.4
NEDD1-203ENST00000429527 NLRP2Q9NX02 1062 aa12.55□□□□□ -0.4
NEDD1-203ENST00000429527 HSP90AB2PQ58FF8 381 aa12.55□□□□□ -0.4
NEDD1-203ENST00000429527 TRIM37O94972 964 aa12.54□□□□□ -0.4
NEDD1-203ENST00000429527 IRX6P78412 446 aaPredicted RBP12.54□□□□□ -0.4
NEDD1-203ENST00000429527 EMILIN1Q9Y6C2 1016 aa12.54□□□□□ -0.4
NEDD1-203ENST00000429527 UBR3Q6ZT12 1888 aa12.54□□□□□ -0.4
NEDD1-203ENST00000429527 DEFB132Q7Z7B7 95 aa12.54□□□□□ -0.4
NEDD1-203ENST00000429527 ZCRB1Q8TBF4 217 aaKnown RBP12.54□□□□□ -0.4
NEDD1-203ENST00000429527 USP35Q9P2H5 1018 aa12.53□□□□□ -0.4
NEDD1-203ENST00000429527 EIF4A2Q14240 407 aaKnown RBP12.53□□□□□ -0.4
NEDD1-203ENST00000429527 SLC27A3Q5K4L6 730 aa12.53□□□□□ -0.4
NEDD1-203ENST00000429527 KDM2BQ8NHM5 1336 aa12.53□□□□□ -0.4
NEDD1-203ENST00000429527 TJP1Q07157 1748 aa12.53□□□□□ -0.4
NEDD1-203ENST00000429527 C4BP0C0L5 1744 aa12.53□□□□□ -0.4
NEDD1-203ENST00000429527 PLEKHG5O94827 1062 aa12.52□□□□□ -0.4
NEDD1-203ENST00000429527 IL13P35225 146 aa12.52□□□□□ -0.4
NEDD1-203ENST00000429527 EZH2Q15910 746 aaKnown RBP12.52□□□□□ -0.4
NEDD1-203ENST00000429527 EP400Q96L91 3159 aa12.52□□□□□ -0.4
NEDD1-203ENST00000429527 KNSTRNQ9Y448 316 aa12.52□□□□□ -0.4
NEDD1-203ENST00000429527 APBA3O96018 575 aa12.52□□□□□ -0.41
NEDD1-203ENST00000429527 TATP17735 454 aaPredicted RBP12.52□□□□□ -0.41
NEDD1-203ENST00000429527 EN1Q05925 392 aaPredicted RBP12.52□□□□□ -0.41
NEDD1-203ENST00000429527 TRMT2AQ8IZ69 625 aaKnown RBP12.52□□□□□ -0.41
NEDD1-203ENST00000429527 EYA1Q99502 592 aa12.52□□□□□ -0.41
NEDD1-203ENST00000429527 PROM2Q8N271 834 aa12.51□□□□□ -0.41
NEDD1-203ENST00000429527 MAP3K5Q99683 1374 aa12.51□□□□□ -0.41
NEDD1-203ENST00000429527 NCBP3Q53F19 620 aaKnown RBP12.5□□□□□ -0.41
NEDD1-203ENST00000429527 BACH2Q9BYV9 841 aa12.5□□□□□ -0.41
NEDD1-203ENST00000429527 RCAN3Q9UKA8 241 aa12.5□□□□□ -0.41
NEDD1-203ENST00000429527 NGEFQ8N5V2 710 aa12.49□□□□□ -0.41
NEDD1-203ENST00000429527 A0A0G2JS52 829 aa12.49□□□□□ -0.41
NEDD1-203ENST00000429527 ZBTB7CA1YPR0 619 aa12.49□□□□□ -0.41
NEDD1-203ENST00000429527 MORC1Q86VD1 984 aa12.49□□□□□ -0.41
NEDD1-203ENST00000429527 CCDC136Q96JN2 1154 aa12.49□□□□□ -0.41
NEDD1-203ENST00000429527 KIF13BQ9NQT8 1826 aa12.49□□□□□ -0.41
NEDD1-203ENST00000429527 SOX12O15370 315 aa12.49□□□□□ -0.41
NEDD1-203ENST00000429527 FBLN1P23142 703 aa12.49□□□□□ -0.41
NEDD1-203ENST00000429527 RAPGEF4Q8WZA2 1011 aa12.49□□□□□ -0.41
NEDD1-203ENST00000429527 SPG7Q9UQ90 795 aa12.49□□□□□ -0.41
NEDD1-203ENST00000429527 AMOTQ4VCS5 1084 aa12.48□□□□□ -0.41
NEDD1-203ENST00000429527 AKT1S1Q96B36 256 aa12.48□□□□□ -0.41
NEDD1-203ENST00000429527 KDM6AO15550 1401 aaPredicted RBP12.48□□□□□ -0.41
NEDD1-203ENST00000429527 FAM182BQ5T319 152 aa12.48□□□□□ -0.41
NEDD1-203ENST00000429527 CYP27B1O15528 508 aa12.47□□□□□ -0.41
NEDD1-203ENST00000429527 NBPF14Q5TI25 921 aa12.47□□□□□ -0.41
NEDD1-203ENST00000429527 TXNRD1Q16881 649 aa12.46□□□□□ -0.41
NEDD1-203ENST00000429527 PHKG2P15735 406 aa12.46□□□□□ -0.41
NEDD1-203ENST00000429527 ERVV-2B6SEH9 535 aa12.46□□□□□ -0.42
NEDD1-203ENST00000429527 HSP90AB1P08238 724 aaKnown RBP12.46□□□□□ -0.42
NEDD1-203ENST00000429527 ANP32AP39687 249 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms