RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 ZBTB7CA1YPR0 619 aa10.69□□□□□ -0.7
CDC42BPA-206ENST00000429440 BCAR3O75815 825 aa10.69□□□□□ -0.7
CDC42BPA-206ENST00000429440 CLSTN1O94985 981 aa10.69□□□□□ -0.7
CDC42BPA-206ENST00000429440 CDCA8Q53HL2 280 aa10.69□□□□□ -0.7
CDC42BPA-206ENST00000429440 PLPPR3Q6T4P5 718 aa10.69□□□□□ -0.7
CDC42BPA-206ENST00000429440 ASXL2Q76L83 1435 aa10.69□□□□□ -0.7
CDC42BPA-206ENST00000429440 KIDINS220Q9ULH0 1771 aa10.69□□□□□ -0.7
CDC42BPA-206ENST00000429440 ADGRL1O94910 1474 aa10.69□□□□□ -0.7
CDC42BPA-206ENST00000429440 GOLIM4O00461 696 aa10.68□□□□□ -0.7
CDC42BPA-206ENST00000429440 CCDC91Q7Z6B0 441 aa10.68□□□□□ -0.7
CDC42BPA-206ENST00000429440 C17orf53Q8N3J3 647 aaPredicted RBP10.68□□□□□ -0.7
CDC42BPA-206ENST00000429440 RBM28Q9NW13 759 aaKnown RBP10.68□□□□□ -0.7
CDC42BPA-206ENST00000429440 ZNF446Q9NWS9 450 aa10.68□□□□□ -0.7
CDC42BPA-206ENST00000429440 PAXBP1Q9Y5B6 917 aa10.68□□□□□ -0.7
CDC42BPA-206ENST00000429440 YEATS2Q9ULM3 1422 aa10.68□□□□□ -0.7
CDC42BPA-206ENST00000429440 KIF2CQ99661 725 aa10.68□□□□□ -0.7
CDC42BPA-206ENST00000429440 ATG3Q9NT62 314 aa10.68□□□□□ -0.7
CDC42BPA-206ENST00000429440 A0A1B0GUL7 405 aa10.67□□□□□ -0.7
CDC42BPA-206ENST00000429440 SWT1Q5T5J6 900 aaKnown RBP10.67□□□□□ -0.7
CDC42BPA-206ENST00000429440 RNF214Q8ND24 703 aa10.67□□□□□ -0.7
CDC42BPA-206ENST00000429440 GAS2L2Q8NHY3 880 aa10.67□□□□□ -0.7
CDC42BPA-206ENST00000429440 CWC15Q9P013 229 aaKnown RBP10.67□□□□□ -0.7
CDC42BPA-206ENST00000429440 RBM27Q9P2N5 1060 aaKnown RBP10.67□□□□□ -0.7
CDC42BPA-206ENST00000429440 PRPF40AO75400 957 aaKnown RBP10.67□□□□□ -0.7
CDC42BPA-206ENST00000429440 ATP2B1P20020 1258 aa10.67□□□□□ -0.7
CDC42BPA-206ENST00000429440 TRHP20396 242 aaPredicted RBP10.67□□□□□ -0.7
CDC42BPA-206ENST00000429440 GPATCH11Q8N954 259 aa10.67□□□□□ -0.7
CDC42BPA-206ENST00000429440 TMX1Q9H3N1 280 aa10.67□□□□□ -0.7
CDC42BPA-206ENST00000429440 DEF6Q9H4E7 631 aa10.67□□□□□ -0.7
CDC42BPA-206ENST00000429440 CXorf56Q9H5V9 222 aa10.67□□□□□ -0.7
CDC42BPA-206ENST00000429440 ADAMTS8Q9UP79 889 aa10.67□□□□□ -0.7
CDC42BPA-206ENST00000429440 COG6Q9Y2V7 657 aa10.67□□□□□ -0.7
CDC42BPA-206ENST00000429440 PCDHB15Q9Y5E8 787 aa10.67□□□□□ -0.7
CDC42BPA-206ENST00000429440 TDO2P48775 406 aa10.66□□□□□ -0.7
CDC42BPA-206ENST00000429440 RBM6P78332 1123 aaKnown RBP10.66□□□□□ -0.7
CDC42BPA-206ENST00000429440 TEX35Q5T0J7 233 aa10.66□□□□□ -0.7
CDC42BPA-206ENST00000429440 SYT10Q6XYQ8 523 aa10.66□□□□□ -0.7
CDC42BPA-206ENST00000429440 NFATC2IPQ8NCF5 419 aa10.66□□□□□ -0.7
CDC42BPA-206ENST00000429440 SYAP1Q96A49 352 aaPredicted RBP10.66□□□□□ -0.7
CDC42BPA-206ENST00000429440 NEURL4Q96JN8 1562 aa10.66□□□□□ -0.7
CDC42BPA-206ENST00000429440 IRF6O14896 467 aa10.66□□□□□ -0.7
CDC42BPA-206ENST00000429440 ZNF853P0CG23 659 aa10.66□□□□□ -0.7
CDC42BPA-206ENST00000429440 C10orf67Q8IYJ2 551 aa10.66□□□□□ -0.7
CDC42BPA-206ENST00000429440 CWC22Q9HCG8 908 aaKnown RBP10.66□□□□□ -0.7
CDC42BPA-206ENST00000429440 SH3BP1Q9Y3L3 701 aa10.66□□□□□ -0.7
CDC42BPA-206ENST00000429440 ANKRD36BQ8N2N9 1353 aa10.66□□□□□ -0.7
CDC42BPA-206ENST00000429440 UGGT1Q9NYU2 1555 aa10.66□□□□□ -0.7
CDC42BPA-206ENST00000429440 BMS1Q14692 1282 aaKnown RBP10.65□□□□□ -0.7
CDC42BPA-206ENST00000429440 KMT5BQ4FZB7 885 aa10.65□□□□□ -0.7
CDC42BPA-206ENST00000429440 NOM1Q5C9Z4 860 aaKnown RBP10.65□□□□□ -0.7
CDC42BPA-206ENST00000429440 RPAINQ86UA6 219 aa10.65□□□□□ -0.7
CDC42BPA-206ENST00000429440 RNF217Q8TC41 542 aa10.65□□□□□ -0.7
CDC42BPA-206ENST00000429440 CCDC189A1A4V9 331 aa10.65□□□□□ -0.7
CDC42BPA-206ENST00000429440 ADCY5O95622 1261 aa10.64□□□□□ -0.71
CDC42BPA-206ENST00000429440 GYS2P54840 703 aa10.64□□□□□ -0.71
CDC42BPA-206ENST00000429440 SUFUQ9UMX1 484 aa10.64□□□□□ -0.71
CDC42BPA-206ENST00000429440 PPRC1Q5VV67 1664 aaKnown RBP10.64□□□□□ -0.71
CDC42BPA-206ENST00000429440 IFT172Q9UG01 1749 aa10.64□□□□□ -0.71
CDC42BPA-206ENST00000429440 KIAA1210Q9ULL0 1709 aa10.64□□□□□ -0.71
CDC42BPA-206ENST00000429440 CD2BP2O95400 341 aaKnown RBP10.64□□□□□ -0.71
CDC42BPA-206ENST00000429440 TRDNQ13061 729 aa10.64□□□□□ -0.71
CDC42BPA-206ENST00000429440 NBPF11Q86T75 865 aa10.64□□□□□ -0.71
CDC42BPA-206ENST00000429440 SUGP1Q8IWZ8 645 aaKnown RBP10.64□□□□□ -0.71
CDC42BPA-206ENST00000429440 CCDC112Q8NEF3 446 aa10.64□□□□□ -0.71
CDC42BPA-206ENST00000429440 PANK1Q8TE04 598 aa10.64□□□□□ -0.71
CDC42BPA-206ENST00000429440 FOXD4L1Q9NU39 408 aa10.64□□□□□ -0.71
CDC42BPA-206ENST00000429440 EFCAB6Q5THR3 1501 aa10.64□□□□□ -0.71
CDC42BPA-206ENST00000429440 TRIM66O15016 1216 aa10.63□□□□□ -0.71
CDC42BPA-206ENST00000429440 CALRP27797 417 aaKnown RBP10.63□□□□□ -0.71
CDC42BPA-206ENST00000429440 SRPK2P78362 688 aaKnown RBP10.63□□□□□ -0.71
CDC42BPA-206ENST00000429440 SRLQ86TD4 932 aa10.63□□□□□ -0.71
CDC42BPA-206ENST00000429440 TOMM22Q9NS69 142 aa10.63□□□□□ -0.71
CDC42BPA-206ENST00000429440 BSDC1Q9NW68 430 aaPredicted RBP10.63□□□□□ -0.71
CDC42BPA-206ENST00000429440 MYOM1P52179 1685 aa10.63□□□□□ -0.71
CDC42BPA-206ENST00000429440 NBPF9Q3BBW0 867 aa10.63□□□□□ -0.71
CDC42BPA-206ENST00000429440 TSGA10IPQ3SY00 556 aa10.63□□□□□ -0.71
CDC42BPA-206ENST00000429440 RNF20Q5VTR2 975 aa10.63□□□□□ -0.71
CDC42BPA-206ENST00000429440 FRMPD1Q5SYB0 1578 aa10.63□□□□□ -0.71
CDC42BPA-206ENST00000429440 MROH2AA6NES4 1674 aa10.63□□□□□ -0.71
CDC42BPA-206ENST00000429440 PPP1R12AO14974 1030 aaPredicted RBP10.62□□□□□ -0.71
CDC42BPA-206ENST00000429440 GPS2Q13227 327 aa10.62□□□□□ -0.71
CDC42BPA-206ENST00000429440 TTC31Q49AM3 519 aaPredicted RBP10.62□□□□□ -0.71
CDC42BPA-206ENST00000429440 SGSM3Q96HU1 749 aa10.62□□□□□ -0.71
CDC42BPA-206ENST00000429440 PYCARDQ9ULZ3 195 aa10.62□□□□□ -0.71
CDC42BPA-206ENST00000429440 KIF3BO15066 747 aa10.62□□□□□ -0.71
CDC42BPA-206ENST00000429440 RABEP1Q15276 862 aa10.62□□□□□ -0.71
CDC42BPA-206ENST00000429440 KRBA2Q6ZNG9 492 aa10.62□□□□□ -0.71
CDC42BPA-206ENST00000429440 DRC1Q96MC2 740 aa10.62□□□□□ -0.71
CDC42BPA-206ENST00000429440 USP25Q9UHP3 1055 aa10.62□□□□□ -0.71
CDC42BPA-206ENST00000429440 V9GYY5 206 aaPredicted RBP10.62□□□□□ -0.71
CDC42BPA-206ENST00000429440 AK9Q5TCS8 1911 aa10.62□□□□□ -0.71
CDC42BPA-206ENST00000429440 SCAF11Q99590 1463 aaKnown RBP10.62□□□□□ -0.71
CDC42BPA-206ENST00000429440 ATP6V1AP38606 617 aa10.61□□□□□ -0.71
CDC42BPA-206ENST00000429440 MAGEA9P43362 315 aa10.61□□□□□ -0.71
CDC42BPA-206ENST00000429440 TPM4P67936 248 aa10.61□□□□□ -0.71
CDC42BPA-206ENST00000429440 SEMA3FQ13275 785 aa10.61□□□□□ -0.71
CDC42BPA-206ENST00000429440 NBPF10Q6P3W6 841 aaKnown RBP10.61□□□□□ -0.71
CDC42BPA-206ENST00000429440 CFAP44Q96MT7 982 aa10.61□□□□□ -0.71
CDC42BPA-206ENST00000429440 CEP89Q96ST8 783 aa10.61□□□□□ -0.71
CDC42BPA-206ENST00000429440 KCNF1Q9H3M0 494 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms