RNA–Protein interactions for RNA: ENST00000429162.2

CASC4-203, Transcript of cancer susceptibility 4, humanhuman

TSL 2

Gene CASC4, Length 1,918 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-203ENST00000429162 DCCP43146 1447 aa25.14■■□□□ 1.61
CASC4-203ENST00000429162 HDAC1Q13547 482 aaPredicted RBP25.14■■□□□ 1.61
CASC4-203ENST00000429162 ERICH6Q7L0X2 663 aa25.14■■□□□ 1.61
CASC4-203ENST00000429162 NCOA3Q9Y6Q9 1424 aa25.13■■□□□ 1.61
CASC4-203ENST00000429162 API5Q9BZZ5 524 aaKnown RBP25.13■■□□□ 1.61
CASC4-203ENST00000429162 ZBTB40Q9NUA8 1239 aa25.13■■□□□ 1.61
CASC4-203ENST00000429162 VIRMAQ69YN4 1812 aaKnown RBP25.13■■□□□ 1.61
CASC4-203ENST00000429162 ABCC4O15439 1325 aa25.12■■□□□ 1.61
CASC4-203ENST00000429162 FOXO3O43524 673 aa25.12■■□□□ 1.61
CASC4-203ENST00000429162 LTV1Q96GA3 475 aaPredicted RBP25.12■■□□□ 1.61
CASC4-203ENST00000429162 IPO9Q96P70 1041 aaKnown RBP25.12■■□□□ 1.61
CASC4-203ENST00000429162 STRCP1A6NGW2 1772 aa25.11■■□□□ 1.61
CASC4-203ENST00000429162 C8orf34Q49A92 452 aa25.1■■□□□ 1.61
CASC4-203ENST00000429162 MST1RQ04912 1400 aa25.1■■□□□ 1.61
CASC4-203ENST00000429162 ANP32EQ9BTT0 268 aa25.1■■□□□ 1.61
CASC4-203ENST00000429162 MAP3K5Q99683 1374 aa25.09■■□□□ 1.61
CASC4-203ENST00000429162 NPM2Q86SE8 214 aaKnown RBP25.09■■□□□ 1.61
CASC4-203ENST00000429162 TMEM94Q12767 1356 aa25.09■■□□□ 1.61
CASC4-203ENST00000429162 USP19O94966 1318 aa25.09■■□□□ 1.61
CASC4-203ENST00000429162 GNAT3A8MTJ3 354 aa25.08■■□□□ 1.61
CASC4-203ENST00000429162 PDZRN3Q9UPQ7 1066 aa25.08■■□□□ 1.61
CASC4-203ENST00000429162 TSPYL4Q9UJ04 414 aa25.08■■□□□ 1.6
CASC4-203ENST00000429162 KRT28Q7Z3Y7 464 aa25.07■■□□□ 1.6
CASC4-203ENST00000429162 MSH6P52701 1360 aa25.06■■□□□ 1.6
CASC4-203ENST00000429162 ATF3P18847 181 aa25.06■■□□□ 1.6
CASC4-203ENST00000429162 NOP58Q9Y2X3 529 aaKnown RBP25.06■■□□□ 1.6
CASC4-203ENST00000429162 ALS2Q96Q42 1657 aa25.06■■□□□ 1.6
CASC4-203ENST00000429162 XPCQ01831 940 aaPredicted RBP25.06■■□□□ 1.6
CASC4-203ENST00000429162 GCP02774 474 aa25.05■■□□□ 1.6
CASC4-203ENST00000429162 KRT24Q2M2I5 525 aa25.04■■□□□ 1.6
CASC4-203ENST00000429162 ZBTB7CA1YPR0 619 aa25.03■■□□□ 1.6
CASC4-203ENST00000429162 ZBTB7BO15156 539 aaPredicted RBP25.03■■□□□ 1.6
CASC4-203ENST00000429162 ARHGEF25Q86VW2 580 aa25.03■■□□□ 1.6
CASC4-203ENST00000429162 USHBP1Q8N6Y0 703 aa25.02■■□□□ 1.6
CASC4-203ENST00000429162 CAMTA1Q9Y6Y1 1673 aa25.02■■□□□ 1.6
CASC4-203ENST00000429162 LMOD2Q6P5Q4 547 aa25.02■■□□□ 1.6
CASC4-203ENST00000429162 SMC5Q8IY18 1101 aa25.02■■□□□ 1.6
CASC4-203ENST00000429162 BABAM1Q9NWV8 329 aa25.02■■□□□ 1.6
CASC4-203ENST00000429162 PTPRCP08575 1304 aa25.02■■□□□ 1.6
CASC4-203ENST00000429162 NCAPD2Q15021 1401 aa25.01■■□□□ 1.59
CASC4-203ENST00000429162 NBPF6Q5VWK0 638 aa25■■□□□ 1.59
CASC4-203ENST00000429162 NBPF4Q96M43 638 aa25■■□□□ 1.59
CASC4-203ENST00000429162 RGPD2P0DJD1 1756 aa25■■□□□ 1.59
CASC4-203ENST00000429162 KDM4FA0A1W2PPD8 638 aa25■■□□□ 1.59
CASC4-203ENST00000429162 RGS12O14924 1447 aa25■■□□□ 1.59
CASC4-203ENST00000429162 MIS18AQ9NYP9 233 aa24.99■■□□□ 1.59
CASC4-203ENST00000429162 ZBTB47Q9UFB7 747 aaPredicted RBP24.99■■□□□ 1.59
CASC4-203ENST00000429162 SOS1Q07889 1333 aaPredicted RBP24.98■■□□□ 1.59
CASC4-203ENST00000429162 CADPS2Q86UW7 1296 aa24.98■■□□□ 1.59
CASC4-203ENST00000429162 LMO7Q8WWI1 1683 aa24.98■■□□□ 1.59
CASC4-203ENST00000429162 FAM208AQ9UK61 1670 aaKnown RBP24.98■■□□□ 1.59
CASC4-203ENST00000429162 MED1Q15648 1581 aaPredicted RBP24.98■■□□□ 1.59
CASC4-203ENST00000429162 DDRGK1Q96HY6 314 aa24.97■■□□□ 1.59
CASC4-203ENST00000429162 HSPA2P54652 639 aa24.96■■□□□ 1.59
CASC4-203ENST00000429162 INTS3Q68E01 1043 aaKnown RBP24.96■■□□□ 1.59
CASC4-203ENST00000429162 IL17REQ8NFR9 667 aa24.96■■□□□ 1.59
CASC4-203ENST00000429162 TAF7Q15545 349 aaPredicted RBP24.94■■□□□ 1.58
CASC4-203ENST00000429162 CEMIPQ8WUJ3 1361 aa24.94■■□□□ 1.58
CASC4-203ENST00000429162 ANKRD24Q8TF21 1146 aa24.94■■□□□ 1.58
CASC4-203ENST00000429162 LMTK3Q96Q04 1460 aa24.93■■□□□ 1.58
CASC4-203ENST00000429162 NPHP3Q7Z494 1330 aa24.93■■□□□ 1.58
CASC4-203ENST00000429162 LRRC59Q96AG4 307 aaKnown RBP24.93■■□□□ 1.58
CASC4-203ENST00000429162 SLC4A2P04920 1241 aa24.92■■□□□ 1.58
CASC4-203ENST00000429162 AMOTQ4VCS5 1084 aa24.92■■□□□ 1.58
CASC4-203ENST00000429162 PLEKHO1Q53GL0 409 aaPredicted RBP24.92■■□□□ 1.58
CASC4-203ENST00000429162 GCC1Q96CN9 775 aa24.92■■□□□ 1.58
CASC4-203ENST00000429162 TNS3Q68CZ2 1445 aa24.91■■□□□ 1.58
CASC4-203ENST00000429162 XIRP1Q702N8 1843 aaKnown RBP24.91■■□□□ 1.58
CASC4-203ENST00000429162 STK31Q9BXU1 1019 aa24.91■■□□□ 1.58
CASC4-203ENST00000429162 PLEKHG5O94827 1062 aa24.9■■□□□ 1.58
CASC4-203ENST00000429162 NUCB1Q02818 461 aa24.9■■□□□ 1.58
CASC4-203ENST00000429162 C1orf115Q9H7X2 142 aa24.9■■□□□ 1.58
CASC4-203ENST00000429162 ABCC6O95255 1503 aa24.9■■□□□ 1.58
CASC4-203ENST00000429162 KDM3BQ7LBC6 1761 aa24.9■■□□□ 1.58
CASC4-203ENST00000429162 OVOS2A0A0G2JMS6 1433 aa24.9■■□□□ 1.58
CASC4-203ENST00000429162 STRCQ7RTU9 1775 aa24.89■■□□□ 1.58
CASC4-203ENST00000429162 AKAP4Q5JQC9 854 aa24.89■■□□□ 1.58
CASC4-203ENST00000429162 CCDC30Q5VVM6 783 aa24.89■■□□□ 1.58
CASC4-203ENST00000429162 PXDNQ92626 1479 aa24.89■■□□□ 1.57
CASC4-203ENST00000429162 ZNF530Q6P9A1 599 aaPredicted RBP24.88■■□□□ 1.57
CASC4-203ENST00000429162 RGPD5Q99666 1765 aa24.87■■□□□ 1.57
CASC4-203ENST00000429162 CRYBG1Q9Y4K1 1723 aa24.86■■□□□ 1.57
CASC4-203ENST00000429162 CHD1LQ86WJ1 897 aa24.86■■□□□ 1.57
CASC4-203ENST00000429162 ERBB3P21860 1342 aa24.86■■□□□ 1.57
CASC4-203ENST00000429162 CACNA1FO60840 1977 aa24.86■■□□□ 1.57
CASC4-203ENST00000429162 AXIN2Q9Y2T1 843 aa24.84■■□□□ 1.57
CASC4-203ENST00000429162 CCT4P50991 539 aaKnown RBP24.84■■□□□ 1.57
CASC4-203ENST00000429162 C1orf141Q5JVX7 400 aa24.84■■□□□ 1.57
CASC4-203ENST00000429162 SIRT2Q8IXJ6 389 aa24.84■■□□□ 1.57
CASC4-203ENST00000429162 ATP10DQ9P241 1426 aa24.84■■□□□ 1.57
CASC4-203ENST00000429162 ZC3H6P61129 1189 aaKnown RBP24.83■■□□□ 1.57
CASC4-203ENST00000429162 G2E3Q7L622 706 aa24.83■■□□□ 1.57
CASC4-203ENST00000429162 DDX17Q92841 729 aaKnown RBP24.83■■□□□ 1.57
CASC4-203ENST00000429162 N4BP2Q86UW6 1770 aaPredicted RBP24.83■■□□□ 1.57
CASC4-203ENST00000429162 COL18A1P39060 1754 aa24.83■■□□□ 1.56
CASC4-203ENST00000429162 TEFQ10587 303 aa24.82■■□□□ 1.56
CASC4-203ENST00000429162 SPATA31A3Q5VYP0 1347 aa24.81■■□□□ 1.56
CASC4-203ENST00000429162 CHMP4AQ9BY43 222 aa24.81■■□□□ 1.56
CASC4-203ENST00000429162 LNPKQ9C0E8 428 aa24.81■■□□□ 1.56
CASC4-203ENST00000429162 UPF2Q9HAU5 1272 aaKnown RBP24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms