RNA–Protein interactions for RNA: ENST00000428969.1

PCCA-206, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 3

Gene PCCA, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-206ENST00000428969 ZCRB1Q8TBF4 217 aaKnown RBP18.32■□□□□ 0.52
PCCA-206ENST00000428969 SYTL4Q96C24 671 aaPredicted RBP18.32■□□□□ 0.52
PCCA-206ENST00000428969 LTV1Q96GA3 475 aaPredicted RBP18.32■□□□□ 0.52
PCCA-206ENST00000428969 TUBGCP6Q96RT7 1819 aa18.32■□□□□ 0.52
PCCA-206ENST00000428969 RTL1A6NKG5 1358 aa18.31■□□□□ 0.52
PCCA-206ENST00000428969 NSD2O96028 1365 aa18.31■□□□□ 0.52
PCCA-206ENST00000428969 CGNL1Q0VF96 1302 aa18.31■□□□□ 0.52
PCCA-206ENST00000428969 TONSLQ96HA7 1378 aa18.3■□□□□ 0.52
PCCA-206ENST00000428969 SHANK3Q9BYB0 1731 aa18.3■□□□□ 0.52
PCCA-206ENST00000428969 HMGB2P26583 209 aaKnown RBP18.3■□□□□ 0.52
PCCA-206ENST00000428969 AMPHP49418 695 aa18.3■□□□□ 0.52
PCCA-206ENST00000428969 SENP3-EIF4A1A0A087X0R7 540 aa18.29■□□□□ 0.52
PCCA-206ENST00000428969 KLHL34Q8N239 644 aa18.29■□□□□ 0.52
PCCA-206ENST00000428969 TESK2Q96S53 571 aa18.29■□□□□ 0.52
PCCA-206ENST00000428969 MEGF6O75095 1541 aa18.28■□□□□ 0.52
PCCA-206ENST00000428969 CCNL1Q9UK58 526 aaPredicted RBP18.28■□□□□ 0.52
PCCA-206ENST00000428969 USP47Q96K76 1375 aa18.28■□□□□ 0.52
PCCA-206ENST00000428969 SMG6Q86US8 1419 aaKnown RBP18.26■□□□□ 0.51
PCCA-206ENST00000428969 GRIN3BO60391 1043 aa18.26■□□□□ 0.51
PCCA-206ENST00000428969 GIGYF1O75420 1035 aaPredicted RBP18.26■□□□□ 0.51
PCCA-206ENST00000428969 KCNQ4P56696 695 aa18.26■□□□□ 0.51
PCCA-206ENST00000428969 RGPD2P0DJD1 1756 aa18.26■□□□□ 0.51
PCCA-206ENST00000428969 PELP1Q8IZL8 1130 aaKnown RBP18.25■□□□□ 0.51
PCCA-206ENST00000428969 ST20-MTHFSA0A0A6YYL1 179 aa18.24■□□□□ 0.51
PCCA-206ENST00000428969 NLGN2Q8NFZ4 835 aa18.24■□□□□ 0.51
PCCA-206ENST00000428969 RAPGEF4Q8WZA2 1011 aa18.24■□□□□ 0.51
PCCA-206ENST00000428969 NBPF6Q5VWK0 638 aa18.23■□□□□ 0.51
PCCA-206ENST00000428969 NBPF4Q96M43 638 aa18.23■□□□□ 0.51
PCCA-206ENST00000428969 KIF24Q5T7B8 1368 aa18.22■□□□□ 0.51
PCCA-206ENST00000428969 COL23A1Q86Y22 540 aaPredicted RBP18.22■□□□□ 0.51
PCCA-206ENST00000428969 FLAD1Q8NFF5 587 aa18.22■□□□□ 0.51
PCCA-206ENST00000428969 PCDH11XQ9BZA7 1347 aa18.22■□□□□ 0.51
PCCA-206ENST00000428969 PCDH11YQ9BZA8 1340 aa18.22■□□□□ 0.51
PCCA-206ENST00000428969 C5P01031 1676 aa18.22■□□□□ 0.51
PCCA-206ENST00000428969 MSH5O43196 834 aa18.21■□□□□ 0.51
PCCA-206ENST00000428969 FBLN1P23142 703 aa18.21■□□□□ 0.51
PCCA-206ENST00000428969 INSRP06213 1382 aa18.2■□□□□ 0.5
PCCA-206ENST00000428969 FYB1O15117 783 aa18.2■□□□□ 0.5
PCCA-206ENST00000428969 TATP17735 454 aaPredicted RBP18.2■□□□□ 0.5
PCCA-206ENST00000428969 RRS1Q15050 365 aaKnown RBP18.2■□□□□ 0.5
PCCA-206ENST00000428969 YBX3P16989 372 aaKnown RBP eCLIP18.19■□□□□ 0.5
PCCA-206ENST00000428969 FLT4P35916 1363 aa18.18■□□□□ 0.5
PCCA-206ENST00000428969 CD2APQ9Y5K6 639 aa18.18■□□□□ 0.5
PCCA-206ENST00000428969 PALLDQ8WX93 1383 aa18.17■□□□□ 0.5
PCCA-206ENST00000428969 TAF1LQ8IZX4 1826 aa18.17■□□□□ 0.5
PCCA-206ENST00000428969 TMF1P82094 1093 aa18.17■□□□□ 0.5
PCCA-206ENST00000428969 USHBP1Q8N6Y0 703 aa18.17■□□□□ 0.5
PCCA-206ENST00000428969 GGNBP2Q9H3C7 697 aa18.17■□□□□ 0.5
PCCA-206ENST00000428969 SMARCC1Q92922 1105 aaPredicted RBP18.16■□□□□ 0.5
PCCA-206ENST00000428969 KIF20BQ96Q89 1820 aa18.15■□□□□ 0.5
PCCA-206ENST00000428969 CDCA8Q53HL2 280 aa18.15■□□□□ 0.5
PCCA-206ENST00000428969 MSL1Q68DK7 614 aa18.15■□□□□ 0.5
PCCA-206ENST00000428969 NSD3Q9BZ95 1437 aa18.15■□□□□ 0.5
PCCA-206ENST00000428969 HSP90AB2PQ58FF8 381 aa18.14■□□□□ 0.49
PCCA-206ENST00000428969 CEP350Q5VT06 3117 aa18.13■□□□□ 0.49
PCCA-206ENST00000428969 C4BP0C0L5 1744 aa18.13■□□□□ 0.49
PCCA-206ENST00000428969 MPRIPQ6WCQ1 1025 aa18.13■□□□□ 0.49
PCCA-206ENST00000428969 PKD1L3Q7Z443 1732 aa18.12■□□□□ 0.49
PCCA-206ENST00000428969 CYP27B1O15528 508 aa18.12■□□□□ 0.49
PCCA-206ENST00000428969 AK7Q96M32 723 aa18.12■□□□□ 0.49
PCCA-206ENST00000428969 ATP10DQ9P241 1426 aa18.12■□□□□ 0.49
PCCA-206ENST00000428969 ITGB4P16144 1822 aa18.12■□□□□ 0.49
PCCA-206ENST00000428969 NCAPD2Q15021 1401 aa18.11■□□□□ 0.49
PCCA-206ENST00000428969 TOGARAM1Q9Y4F4 1720 aa18.11■□□□□ 0.49
PCCA-206ENST00000428969 UBR3Q6ZT12 1888 aa18.09■□□□□ 0.49
PCCA-206ENST00000428969 ADCY9O60503 1353 aa18.09■□□□□ 0.49
PCCA-206ENST00000428969 NKX1-1Q15270 411 aaPredicted RBP18.09■□□□□ 0.49
PCCA-206ENST00000428969 SSFA2P28290 1259 aa18.08■□□□□ 0.48
PCCA-206ENST00000428969 GPBP1L1Q9HC44 474 aaPredicted RBP18.08■□□□□ 0.48
PCCA-206ENST00000428969 SPG7Q9UQ90 795 aa18.08■□□□□ 0.48
PCCA-206ENST00000428969 ANKRD26Q9UPS8 1709 aa18.07■□□□□ 0.48
PCCA-206ENST00000428969 PIGBQ92521 554 aa18.07■□□□□ 0.48
PCCA-206ENST00000428969 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.07■□□□□ 0.48
PCCA-206ENST00000428969 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.06■□□□□ 0.48
PCCA-206ENST00000428969 MAP2P11137 1827 aaKnown RBP18.06■□□□□ 0.48
PCCA-206ENST00000428969 LOC102724428A0A0B4J2F2 783 aa18.05■□□□□ 0.48
PCCA-206ENST00000428969 SIK1P57059 783 aa18.05■□□□□ 0.48
PCCA-206ENST00000428969 EMILIN1Q9Y6C2 1016 aa18.05■□□□□ 0.48
PCCA-206ENST00000428969 PLEKHG2Q9H7P9 1386 aa18.04■□□□□ 0.48
PCCA-206ENST00000428969 WASHC2AQ641Q2 1341 aa18.04■□□□□ 0.48
PCCA-206ENST00000428969 IGSF1Q8N6C5 1336 aa18.04■□□□□ 0.48
PCCA-206ENST00000428969 PHF14O94880 888 aa18.04■□□□□ 0.48
PCCA-206ENST00000428969 IFFO2Q5TF58 517 aa18.04■□□□□ 0.48
PCCA-206ENST00000428969 AMIGO3Q86WK7 504 aa18.04■□□□□ 0.48
PCCA-206ENST00000428969 CARD14Q9BXL6 1004 aa18.04■□□□□ 0.48
PCCA-206ENST00000428969 TMOD3Q9NYL9 352 aa18.03■□□□□ 0.48
PCCA-206ENST00000428969 IFNL2Q8IZJ0 200 aa18.01■□□□□ 0.47
PCCA-206ENST00000428969 LINC00116Q8NCU8 138 aa18.01■□□□□ 0.47
PCCA-206ENST00000428969 GNPATO15228 680 aa18■□□□□ 0.47
PCCA-206ENST00000428969 PPM1GO15355 546 aaPredicted RBP18■□□□□ 0.47
PCCA-206ENST00000428969 HSPA6P17066 643 aa18■□□□□ 0.47
PCCA-206ENST00000428969 EYA1Q99502 592 aa18■□□□□ 0.47
PCCA-206ENST00000428969 CICQ96RK0 1608 aaPredicted RBP18■□□□□ 0.47
PCCA-206ENST00000428969 PHKG2P15735 406 aa17.99■□□□□ 0.47
PCCA-206ENST00000428969 ATP6V1AP38606 617 aa17.98■□□□□ 0.47
PCCA-206ENST00000428969 ASAP1Q9ULH1 1129 aa17.98■□□□□ 0.47
PCCA-206ENST00000428969 KIF13BQ9NQT8 1826 aa17.98■□□□□ 0.47
PCCA-206ENST00000428969 ZNF831Q5JPB2 1677 aa17.97■□□□□ 0.47
PCCA-206ENST00000428969 ITPK1Q13572 414 aa17.97■□□□□ 0.47
PCCA-206ENST00000428969 ZNF526Q8TF50 670 aaPredicted RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms