RNA–Protein interactions for RNA: ENST00000428659.1

TIMM9P3-201, Transcript of TIMM9 pseudogene 3, humanhuman

BASIC

Gene TIMM9P3, Length 274 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMM9P3-201ENST00000428659 CC2D2BQ6DHV5 1058 aa7.65□□□□□ -1.18
TIMM9P3-201ENST00000428659 POLMQ9NP87 494 aaPredicted RBP7.65□□□□□ -1.18
TIMM9P3-201ENST00000428659 RAB6BQ9NRW1 208 aa7.65□□□□□ -1.18
TIMM9P3-201ENST00000428659 CHIC2Q9UKJ5 165 aa7.65□□□□□ -1.18
TIMM9P3-201ENST00000428659 ATP5J2-PTCD1G3V325 749 aa7.64□□□□□ -1.19
TIMM9P3-201ENST00000428659 MCCD1P59942 119 aaPredicted RBP7.64□□□□□ -1.19
TIMM9P3-201ENST00000428659 ALG2Q9H553 416 aa7.64□□□□□ -1.19
TIMM9P3-201ENST00000428659 SLC35F4A4IF30 521 aa7.63□□□□□ -1.19
TIMM9P3-201ENST00000428659 RHOQP17081 205 aa7.63□□□□□ -1.19
TIMM9P3-201ENST00000428659 EIF4G2P78344 907 aaKnown RBP eCLIP7.63□□□□□ -1.19
TIMM9P3-201ENST00000428659 RNF20Q5VTR2 975 aa7.63□□□□□ -1.19
TIMM9P3-201ENST00000428659 MEN1O00255 615 aa7.62□□□□□ -1.19
TIMM9P3-201ENST00000428659 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.62□□□□□ -1.19
TIMM9P3-201ENST00000428659 PRICKLE2Q7Z3G6 844 aa7.62□□□□□ -1.19
TIMM9P3-201ENST00000428659 ARHGEF10LQ9HCE6 1279 aa7.62□□□□□ -1.19
TIMM9P3-201ENST00000428659 CUEDC1Q9NWM3 386 aaPredicted RBP7.62□□□□□ -1.19
TIMM9P3-201ENST00000428659 ZNF330Q9Y3S2 320 aaPredicted RBP7.62□□□□□ -1.19
TIMM9P3-201ENST00000428659 WIPF1O43516 503 aa7.61□□□□□ -1.19
TIMM9P3-201ENST00000428659 IL2RAP01589 272 aa7.61□□□□□ -1.19
TIMM9P3-201ENST00000428659 RNF144AP50876 292 aaPredicted RBP7.61□□□□□ -1.19
TIMM9P3-201ENST00000428659 FNBP4Q8N3X1 1017 aaPredicted RBP7.61□□□□□ -1.19
TIMM9P3-201ENST00000428659 CCDC155Q8N6L0 562 aa7.61□□□□□ -1.19
TIMM9P3-201ENST00000428659 PRM3Q9NNZ6 103 aa7.61□□□□□ -1.19
TIMM9P3-201ENST00000428659 UBTFP17480 764 aaKnown RBP7.6□□□□□ -1.19
TIMM9P3-201ENST00000428659 WASHC4Q2M389 1173 aa7.6□□□□□ -1.19
TIMM9P3-201ENST00000428659 OXLD1Q5BKU9 147 aa7.6□□□□□ -1.19
TIMM9P3-201ENST00000428659 RNF135Q8IUD6 432 aa7.6□□□□□ -1.19
TIMM9P3-201ENST00000428659 HRH3Q9Y5N1 445 aa7.6□□□□□ -1.19
TIMM9P3-201ENST00000428659 KRT76Q01546 638 aa7.59□□□□□ -1.19
TIMM9P3-201ENST00000428659 POU4F2Q12837 409 aa7.59□□□□□ -1.19
TIMM9P3-201ENST00000428659 FLIIQ13045 1269 aa7.59□□□□□ -1.19
TIMM9P3-201ENST00000428659 SEMA3FQ13275 785 aa7.59□□□□□ -1.19
TIMM9P3-201ENST00000428659 SLFNL1Q499Z3 407 aa7.59□□□□□ -1.19
TIMM9P3-201ENST00000428659 NPAS3Q8IXF0 933 aa7.59□□□□□ -1.19
TIMM9P3-201ENST00000428659 GRIP2Q9C0E4 1043 aa7.59□□□□□ -1.19
TIMM9P3-201ENST00000428659 DOLKQ9UPQ8 538 aa7.59□□□□□ -1.19
TIMM9P3-201ENST00000428659 CLN3Q13286 438 aa7.58□□□□□ -1.2
TIMM9P3-201ENST00000428659 VSIG8P0DPA2 414 aa7.57□□□□□ -1.2
TIMM9P3-201ENST00000428659 HDGFL1Q5TGJ6 251 aa7.57□□□□□ -1.2
TIMM9P3-201ENST00000428659 LYSMD3Q7Z3D4 306 aa7.57□□□□□ -1.2
TIMM9P3-201ENST00000428659 PLPP7Q8NBV4 271 aa7.57□□□□□ -1.2
TIMM9P3-201ENST00000428659 SLC16A10Q8TF71 515 aa7.57□□□□□ -1.2
TIMM9P3-201ENST00000428659 IRF7Q92985 503 aa7.57□□□□□ -1.2
TIMM9P3-201ENST00000428659 UCN2Q96RP3 112 aa7.57□□□□□ -1.2
TIMM9P3-201ENST00000428659 ETNK1Q9HBU6 452 aa7.57□□□□□ -1.2
TIMM9P3-201ENST00000428659 CENPCQ03188 943 aa7.56□□□□□ -1.2
TIMM9P3-201ENST00000428659 CYP2U1Q7Z449 544 aa7.56□□□□□ -1.2
TIMM9P3-201ENST00000428659 DEPDC4Q8N2C3 294 aa7.56□□□□□ -1.2
TIMM9P3-201ENST00000428659 VWA5B2Q8N398 1253 aa7.56□□□□□ -1.2
TIMM9P3-201ENST00000428659 CNKSR1Q969H4 720 aa7.56□□□□□ -1.2
TIMM9P3-201ENST00000428659 XAGE2Q96GT9 111 aa7.56□□□□□ -1.2
TIMM9P3-201ENST00000428659 FHDC1Q9C0D6 1143 aaPredicted RBP7.56□□□□□ -1.2
TIMM9P3-201ENST00000428659 ITGA6P23229 1130 aa7.55□□□□□ -1.2
TIMM9P3-201ENST00000428659 SCNN1DP51172 638 aa7.55□□□□□ -1.2
TIMM9P3-201ENST00000428659 RNFT1Q5M7Z0 435 aa7.55□□□□□ -1.2
TIMM9P3-201ENST00000428659 TBC1D9Q6ZT07 1266 aa7.55□□□□□ -1.2
TIMM9P3-201ENST00000428659 CCDC125Q86Z20 511 aa7.55□□□□□ -1.2
TIMM9P3-201ENST00000428659 PCDHGA11Q9Y5H2 935 aa7.55□□□□□ -1.2
TIMM9P3-201ENST00000428659 RAD21O60216 631 aa7.54□□□□□ -1.2
TIMM9P3-201ENST00000428659 GNRH1P01148 92 aa7.54□□□□□ -1.2
TIMM9P3-201ENST00000428659 THBS1P07996 1170 aa7.54□□□□□ -1.2
TIMM9P3-201ENST00000428659 SKIP12755 728 aa7.54□□□□□ -1.2
TIMM9P3-201ENST00000428659 ESYT1Q9BSJ8 1104 aa7.54□□□□□ -1.2
TIMM9P3-201ENST00000428659 TMEM229AB2RXF0 380 aa7.53□□□□□ -1.2
TIMM9P3-201ENST00000428659 USP4Q13107 963 aa7.53□□□□□ -1.2
TIMM9P3-201ENST00000428659 DBN1Q16643 649 aa7.53□□□□□ -1.2
TIMM9P3-201ENST00000428659 NLRP3Q96P20 1036 aa7.53□□□□□ -1.2
TIMM9P3-201ENST00000428659 USP3Q9Y6I4 520 aa7.53□□□□□ -1.2
TIMM9P3-201ENST00000428659 MYCP01106 439 aaPredicted RBP7.52□□□□□ -1.21
TIMM9P3-201ENST00000428659 GPC1P35052 558 aa7.52□□□□□ -1.21
TIMM9P3-201ENST00000428659 SOX11P35716 441 aa7.52□□□□□ -1.21
TIMM9P3-201ENST00000428659 PHKA2P46019 1235 aa7.52□□□□□ -1.21
TIMM9P3-201ENST00000428659 SLC27A3Q5K4L6 730 aa7.52□□□□□ -1.21
TIMM9P3-201ENST00000428659 NBPF10Q6P3W6 841 aaKnown RBP7.52□□□□□ -1.21
TIMM9P3-201ENST00000428659 NBPF15Q8N660 670 aa7.52□□□□□ -1.21
TIMM9P3-201ENST00000428659 NANOS1Q8WY41 292 aaKnown RBP7.52□□□□□ -1.21
TIMM9P3-201ENST00000428659 ZNF592Q92610 1267 aa7.52□□□□□ -1.21
TIMM9P3-201ENST00000428659 SPATA31C2B4DYI2 1134 aa7.51□□□□□ -1.21
TIMM9P3-201ENST00000428659 NCOA4Q13772 614 aa7.51□□□□□ -1.21
TIMM9P3-201ENST00000428659 CDC14CA4D256 554 aa7.5□□□□□ -1.21
TIMM9P3-201ENST00000428659 ZBTB7BO15156 539 aaPredicted RBP7.5□□□□□ -1.21
TIMM9P3-201ENST00000428659 MAP7D1Q3KQU3 841 aa7.5□□□□□ -1.21
TIMM9P3-201ENST00000428659 PROSER2Q86WR7 435 aaPredicted RBP7.5□□□□□ -1.21
TIMM9P3-201ENST00000428659 CNTNAP3BQ96NU0 1288 aa7.5□□□□□ -1.21
TIMM9P3-201ENST00000428659 COL25A1Q9BXS0 654 aaPredicted RBP7.5□□□□□ -1.21
TIMM9P3-201ENST00000428659 CNTNAP3Q9BZ76 1288 aa7.5□□□□□ -1.21
TIMM9P3-201ENST00000428659 SERTAD1Q9UHV2 236 aa7.5□□□□□ -1.21
TIMM9P3-201ENST00000428659 KIAA1024Q9UPX6 916 aa7.5□□□□□ -1.21
TIMM9P3-201ENST00000428659 GPR25O00155 361 aa7.49□□□□□ -1.21
TIMM9P3-201ENST00000428659 GDF10P55107 478 aa7.49□□□□□ -1.21
TIMM9P3-201ENST00000428659 C4orf17Q53FE4 359 aa7.49□□□□□ -1.21
TIMM9P3-201ENST00000428659 ZNF295-AS1Q8N0V1 137 aa7.49□□□□□ -1.21
TIMM9P3-201ENST00000428659 GAS2L1Q99501 681 aaPredicted RBP7.49□□□□□ -1.21
TIMM9P3-201ENST00000428659 ESF1Q9H501 851 aaKnown RBP7.49□□□□□ -1.21
TIMM9P3-201ENST00000428659 USP17L5A8MUK1 530 aa7.48□□□□□ -1.21
TIMM9P3-201ENST00000428659 INHAP05111 366 aa7.48□□□□□ -1.21
TIMM9P3-201ENST00000428659 GAS6Q14393 721 aa7.48□□□□□ -1.21
TIMM9P3-201ENST00000428659 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.48□□□□□ -1.21
TIMM9P3-201ENST00000428659 WHAMMQ8TF30 809 aa7.48□□□□□ -1.21
TIMM9P3-201ENST00000428659 A6NJR5 290 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms