RNA–Protein interactions for RNA: ENST00000428336.5

TSPO-204, Transcript of translocator protein, humanhuman

TSL 5

Gene TSPO, Length 672 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-204ENST00000428336 WASHC2AQ641Q2 1341 aa21.26■□□□□ 0.99
TSPO-204ENST00000428336 RAPGEF4Q8WZA2 1011 aa21.25■□□□□ 0.99
TSPO-204ENST00000428336 RGPD2P0DJD1 1756 aa21.24■□□□□ 0.99
TSPO-204ENST00000428336 TATP17735 454 aaPredicted RBP21.23■□□□□ 0.99
TSPO-204ENST00000428336 PRIM1P49642 420 aaKnown RBP21.23■□□□□ 0.99
TSPO-204ENST00000428336 TNNT2P45379 298 aaPredicted RBP21.21■□□□□ 0.99
TSPO-204ENST00000428336 SLC15A2Q16348 729 aa21.21■□□□□ 0.99
TSPO-204ENST00000428336 PDGFDQ9GZP0 370 aaPredicted RBP21.21■□□□□ 0.99
TSPO-204ENST00000428336 STK32BQ9NY57 414 aa21.2■□□□□ 0.98
TSPO-204ENST00000428336 NCAPD2Q15021 1401 aa21.2■□□□□ 0.98
TSPO-204ENST00000428336 SYTL4Q96C24 671 aaPredicted RBP21.19■□□□□ 0.98
TSPO-204ENST00000428336 EYA1Q99502 592 aa21.19■□□□□ 0.98
TSPO-204ENST00000428336 SPON1Q9HCB6 807 aa21.19■□□□□ 0.98
TSPO-204ENST00000428336 LRRC4BQ9NT99 713 aa21.19■□□□□ 0.98
TSPO-204ENST00000428336 NSD2O96028 1365 aa21.19■□□□□ 0.98
TSPO-204ENST00000428336 KIF7Q2M1P5 1343 aa21.18■□□□□ 0.98
TSPO-204ENST00000428336 SHANK3Q9BYB0 1731 aa21.17■□□□□ 0.98
TSPO-204ENST00000428336 BTAF1O14981 1849 aa21.16■□□□□ 0.98
TSPO-204ENST00000428336 ANKRD26Q9UPS8 1709 aa21.16■□□□□ 0.98
TSPO-204ENST00000428336 PCDH11XQ9BZA7 1347 aa21.16■□□□□ 0.98
TSPO-204ENST00000428336 PCDH11YQ9BZA8 1340 aa21.16■□□□□ 0.98
TSPO-204ENST00000428336 CYP27B1O15528 508 aa21.16■□□□□ 0.98
TSPO-204ENST00000428336 EIF4A2Q14240 407 aaKnown RBP21.15■□□□□ 0.98
TSPO-204ENST00000428336 SLC27A3Q5K4L6 730 aa21.15■□□□□ 0.98
TSPO-204ENST00000428336 KNSTRNQ9Y448 316 aa21.15■□□□□ 0.98
TSPO-204ENST00000428336 ZNF827Q17R98 1081 aa21.14■□□□□ 0.97
TSPO-204ENST00000428336 ZBTB7AO95365 584 aa21.13■□□□□ 0.97
TSPO-204ENST00000428336 MORC1Q86VD1 984 aa21.13■□□□□ 0.97
TSPO-204ENST00000428336 PAPPAQ13219 1627 aa21.12■□□□□ 0.97
TSPO-204ENST00000428336 KCNQ4P56696 695 aa21.12■□□□□ 0.97
TSPO-204ENST00000428336 AMER1Q5JTC6 1135 aaPredicted RBP21.12■□□□□ 0.97
TSPO-204ENST00000428336 MAP2P11137 1827 aaKnown RBP21.12■□□□□ 0.97
TSPO-204ENST00000428336 KAT6BQ8WYB5 2073 aa21.11■□□□□ 0.97
TSPO-204ENST00000428336 CASZ1Q86V15 1759 aa21.11■□□□□ 0.97
TSPO-204ENST00000428336 AKT1S1Q96B36 256 aa21.11■□□□□ 0.97
TSPO-204ENST00000428336 DOT1LQ8TEK3 1739 aa21.1■□□□□ 0.97
TSPO-204ENST00000428336 NKX1-1Q15270 411 aaPredicted RBP21.1■□□□□ 0.97
TSPO-204ENST00000428336 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.1■□□□□ 0.97
TSPO-204ENST00000428336 SPG7Q9UQ90 795 aa21.1■□□□□ 0.97
TSPO-204ENST00000428336 PER1O15534 1290 aaPredicted RBP21.09■□□□□ 0.97
TSPO-204ENST00000428336 PTGER2P43116 358 aa21.09■□□□□ 0.97
TSPO-204ENST00000428336 PPP1R1BQ9UD71 204 aaPredicted RBP21.09■□□□□ 0.97
TSPO-204ENST00000428336 ATF5Q9Y2D1 282 aaPredicted RBP21.09■□□□□ 0.97
TSPO-204ENST00000428336 IGSF1Q8N6C5 1336 aa21.08■□□□□ 0.97
TSPO-204ENST00000428336 MTFR1LQ9H019 292 aa21.07■□□□□ 0.96
TSPO-204ENST00000428336 MPRIPQ6WCQ1 1025 aa21.06■□□□□ 0.96
TSPO-204ENST00000428336 CCNL1Q9UK58 526 aaPredicted RBP21.06■□□□□ 0.96
TSPO-204ENST00000428336 PKD1L3Q7Z443 1732 aa21.05■□□□□ 0.96
TSPO-204ENST00000428336 SGIP1Q9BQI5 828 aa21.05■□□□□ 0.96
TSPO-204ENST00000428336 PHKG2P15735 406 aa21.04■□□□□ 0.96
TSPO-204ENST00000428336 PLEKHG2Q9H7P9 1386 aa21.03■□□□□ 0.96
TSPO-204ENST00000428336 IFNL2Q8IZJ0 200 aa21.03■□□□□ 0.96
TSPO-204ENST00000428336 PIGBQ92521 554 aa21.03■□□□□ 0.96
TSPO-204ENST00000428336 PNPLA7Q6ZV29 1317 aa21.03■□□□□ 0.96
TSPO-204ENST00000428336 PALLDQ8WX93 1383 aa21.02■□□□□ 0.96
TSPO-204ENST00000428336 TFCP2L1Q9NZI6 479 aa21.02■□□□□ 0.96
TSPO-204ENST00000428336 LY75O60449 1722 aa21.01■□□□□ 0.95
TSPO-204ENST00000428336 IL13P35225 146 aa21.01■□□□□ 0.95
TSPO-204ENST00000428336 AEBP1Q8IUX7 1158 aa21■□□□□ 0.95
TSPO-204ENST00000428336 TOGARAM1Q9Y4F4 1720 aa20.99■□□□□ 0.95
TSPO-204ENST00000428336 MTHFSP49914 203 aa20.99■□□□□ 0.95
TSPO-204ENST00000428336 CC2D1BQ5T0F9 858 aaKnown RBP20.99■□□□□ 0.95
TSPO-204ENST00000428336 SLC16A10Q8TF71 515 aa20.99■□□□□ 0.95
TSPO-204ENST00000428336 SMARCC1Q92922 1105 aaPredicted RBP20.99■□□□□ 0.95
TSPO-204ENST00000428336 PLEKHO1Q53GL0 409 aaPredicted RBP20.98■□□□□ 0.95
TSPO-204ENST00000428336 TMOD3Q9NYL9 352 aa20.97■□□□□ 0.95
TSPO-204ENST00000428336 AMOTQ4VCS5 1084 aa20.96■□□□□ 0.95
TSPO-204ENST00000428336 SULT6B1Q6IMI4 303 aa20.96■□□□□ 0.95
TSPO-204ENST00000428336 NPC1L1Q9UHC9 1359 aa20.96■□□□□ 0.95
TSPO-204ENST00000428336 COL23A1Q86Y22 540 aaPredicted RBP20.95■□□□□ 0.94
TSPO-204ENST00000428336 FHDC1Q9C0D6 1143 aaPredicted RBP20.95■□□□□ 0.94
TSPO-204ENST00000428336 ASAP1Q9ULH1 1129 aa20.95■□□□□ 0.94
TSPO-204ENST00000428336 KDRP35968 1356 aa20.95■□□□□ 0.94
TSPO-204ENST00000428336 HMGB2P26583 209 aaKnown RBP20.94■□□□□ 0.94
TSPO-204ENST00000428336 ZNF530Q6P9A1 599 aaPredicted RBP20.94■□□□□ 0.94
TSPO-204ENST00000428336 ARXQ96QS3 562 aa20.94■□□□□ 0.94
TSPO-204ENST00000428336 SYT17Q9BSW7 474 aa20.94■□□□□ 0.94
TSPO-204ENST00000428336 LOC102724428A0A0B4J2F2 783 aa20.93■□□□□ 0.94
TSPO-204ENST00000428336 ERVV-2B6SEH9 535 aa20.93■□□□□ 0.94
TSPO-204ENST00000428336 HSP90AB1P08238 724 aaKnown RBP20.93■□□□□ 0.94
TSPO-204ENST00000428336 SIK1P57059 783 aa20.93■□□□□ 0.94
TSPO-204ENST00000428336 DCAF5Q96JK2 942 aa20.93■□□□□ 0.94
TSPO-204ENST00000428336 ATG3Q9NT62 314 aa20.93■□□□□ 0.94
TSPO-204ENST00000428336 ITGB4P16144 1822 aa20.92■□□□□ 0.94
TSPO-204ENST00000428336 QSER1Q2KHR3 1735 aa20.91■□□□□ 0.94
TSPO-204ENST00000428336 KDM6AO15550 1401 aaPredicted RBP20.9■□□□□ 0.94
TSPO-204ENST00000428336 AMIGO3Q86WK7 504 aa20.9■□□□□ 0.94
TSPO-204ENST00000428336 ITPK1Q13572 414 aa20.89■□□□□ 0.93
TSPO-204ENST00000428336 CNGB1Q14028 1251 aaPredicted RBP20.89■□□□□ 0.93
TSPO-204ENST00000428336 LINC00116Q8NCU8 138 aa20.89■□□□□ 0.93
TSPO-204ENST00000428336 MAP3K5Q99683 1374 aa20.88■□□□□ 0.93
TSPO-204ENST00000428336 MSH5O43196 834 aa20.88■□□□□ 0.93
TSPO-204ENST00000428336 DIAPH1O60610 1272 aaKnown RBP20.88■□□□□ 0.93
TSPO-204ENST00000428336 POLD1P28340 1107 aa20.88■□□□□ 0.93
TSPO-204ENST00000428336 C1orf141Q5JVX7 400 aa20.88■□□□□ 0.93
TSPO-204ENST00000428336 FLAD1Q8NFF5 587 aa20.88■□□□□ 0.93
TSPO-204ENST00000428336 TUBGCP6Q96RT7 1819 aa20.88■□□□□ 0.93
TSPO-204ENST00000428336 HMOX1P09601 288 aa20.87■□□□□ 0.93
TSPO-204ENST00000428336 ZEB1P37275 1124 aaPredicted RBP20.87■□□□□ 0.93
TSPO-204ENST00000428336 ATP6V1AP38606 617 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms